data_7B3T # _model_server_result.job_id fG-nxNZ4favqMNlk-MqJKQ _model_server_result.datetime_utc '2025-07-01 18:06:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b3t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1401}' # _entry.id 7B3T # _exptl.entry_id 7B3T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 208.258 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(phenylmethyl)-1~{H}-pyrrolo[2,3-b]pyridine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 123.79 _cell.angle_gamma 90 _cell.entry_id 7B3T _cell.length_a 111.57 _cell.length_b 43.04 _cell.length_c 86.33 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B3T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H12 N2' _chem_comp.formula_weight 208.258 _chem_comp.id SVK _chem_comp.mon_nstd_flag . _chem_comp.name 3-(phenylmethyl)-1~{H}-pyrrolo[2,3-b]pyridine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 SVK doub 294 n y C C5 SVK sing 295 n y C1 C2 SVK sing 296 n y C5 C4 SVK doub 297 n y C2 C3 SVK doub 298 n y C4 C3 SVK sing 299 n y C3 C6 SVK sing 300 n n C6 C7 SVK sing 301 n n C8 C7 SVK doub 302 n y C8 N SVK sing 303 n y C7 C10 SVK sing 304 n y N C9 SVK sing 305 n y C10 C9 SVK doub 306 n y C10 C11 SVK sing 307 n y C9 N1 SVK sing 308 n y C11 C12 SVK doub 309 n y N1 C13 SVK doub 310 n y C12 C13 SVK sing 311 n y C1 H1 SVK sing 312 n n C2 H2 SVK sing 313 n n C8 H3 SVK sing 314 n n C11 H4 SVK sing 315 n n C12 H5 SVK sing 316 n n C13 H6 SVK sing 317 n n N H7 SVK sing 318 n n C6 H8 SVK sing 319 n n C6 H9 SVK sing 320 n n C4 H10 SVK sing 321 n n C5 H11 SVK sing 322 n n C H12 SVK sing 323 n n # _atom_sites.entry_id 7B3T _atom_sites.fract_transf_matrix[1][1] 0.008963 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005998 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023234 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013938 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SVK A 1 1401 1 SVK INH . C 3 CL A 1 1402 1 CL CL . D 4 SO4 A 1 1403 2 SO4 SO4 . E 4 SO4 A 1 1404 3 SO4 SO4 . F 5 HOH A 1 1501 90 HOH HOH . F 5 HOH A 2 1502 7 HOH HOH . F 5 HOH A 3 1503 28 HOH HOH . F 5 HOH A 4 1504 91 HOH HOH . F 5 HOH A 5 1505 42 HOH HOH . F 5 HOH A 6 1506 61 HOH HOH . F 5 HOH A 7 1507 21 HOH HOH . F 5 HOH A 8 1508 9 HOH HOH . F 5 HOH A 9 1509 85 HOH HOH . F 5 HOH A 10 1510 77 HOH HOH . F 5 HOH A 11 1511 72 HOH HOH . F 5 HOH A 12 1512 86 HOH HOH . F 5 HOH A 13 1513 26 HOH HOH . F 5 HOH A 14 1514 4 HOH HOH . F 5 HOH A 15 1515 55 HOH HOH . F 5 HOH A 16 1516 8 HOH HOH . F 5 HOH A 17 1517 12 HOH HOH . F 5 HOH A 18 1518 24 HOH HOH . F 5 HOH A 19 1519 89 HOH HOH . F 5 HOH A 20 1520 37 HOH HOH . F 5 HOH A 21 1521 10 HOH HOH . F 5 HOH A 22 1522 25 HOH HOH . F 5 HOH A 23 1523 87 HOH HOH . F 5 HOH A 24 1524 22 HOH HOH . F 5 HOH A 25 1525 40 HOH HOH . F 5 HOH A 26 1526 88 HOH HOH . F 5 HOH A 27 1527 32 HOH HOH . F 5 HOH A 28 1528 18 HOH HOH . F 5 HOH A 29 1529 65 HOH HOH . F 5 HOH A 30 1530 51 HOH HOH . F 5 HOH A 31 1531 53 HOH HOH . F 5 HOH A 32 1532 57 HOH HOH . F 5 HOH A 33 1533 46 HOH HOH . F 5 HOH A 34 1534 6 HOH HOH . F 5 HOH A 35 1535 41 HOH HOH . F 5 HOH A 36 1536 23 HOH HOH . F 5 HOH A 37 1537 44 HOH HOH . F 5 HOH A 38 1538 64 HOH HOH . F 5 HOH A 39 1539 13 HOH HOH . F 5 HOH A 40 1540 43 HOH HOH . F 5 HOH A 41 1541 69 HOH HOH . F 5 HOH A 42 1542 48 HOH HOH . F 5 HOH A 43 1543 71 HOH HOH . F 5 HOH A 44 1544 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SVK . . . B 2 193.324 -31.83 78.029 1 83.55 ? C1 SVK 1401 A 1 HETATM 2 C C2 SVK . . . B 2 194.071 -31.721 79.194 1 80.77 ? C2 SVK 1401 A 1 HETATM 3 C C3 SVK . . . B 2 193.567 -31.042 80.297 1 78.81 ? C3 SVK 1401 A 1 HETATM 4 C C7 SVK . . . B 2 195.213 -29.702 81.814 1 70.34 ? C7 SVK 1401 A 1 HETATM 5 C C8 SVK . . . B 2 194.815 -28.397 81.786 1 67.41 ? C8 SVK 1401 A 1 HETATM 6 C C9 SVK . . . B 2 196.973 -28.346 82.309 1 66.28 ? C9 SVK 1401 A 1 HETATM 7 C C10 SVK . . . B 2 196.604 -29.687 82.154 1 67.05 ? C10 SVK 1401 A 1 HETATM 8 C C11 SVK . . . B 2 197.598 -30.645 82.346 1 64.8 ? C11 SVK 1401 A 1 HETATM 9 C C12 SVK . . . B 2 198.878 -30.214 82.678 1 63.96 ? C12 SVK 1401 A 1 HETATM 10 C C13 SVK . . . B 2 199.128 -28.85 82.804 1 62.72 ? C13 SVK 1401 A 1 HETATM 11 N N1 SVK . . . B 2 198.198 -27.895 82.625 1 65.52 ? N1 SVK 1401 A 1 HETATM 12 N N SVK . . . B 2 195.871 -27.572 82.082 1 65.32 ? N SVK 1401 A 1 HETATM 13 C C6 SVK . . . B 2 194.376 -30.93 81.567 1 74.88 ? C6 SVK 1401 A 1 HETATM 14 C C4 SVK . . . B 2 192.298 -30.483 80.212 1 80.89 ? C4 SVK 1401 A 1 HETATM 15 C C5 SVK . . . B 2 191.552 -30.593 79.046 1 81.99 ? C5 SVK 1401 A 1 HETATM 16 C C SVK . . . B 2 192.064 -31.265 77.954 1 83.11 ? C SVK 1401 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #