data_7B40 # _model_server_result.job_id JuVitm4JTZSTR4CV_pV1UA _model_server_result.datetime_utc '2024-12-12 01:48:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b40 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1401}' # _entry.id 7B40 # _exptl.entry_id 7B40 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 357.452 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(phenylmethyl)-5-(1-piperidin-4-ylpyrazol-4-yl)-1~{H}-pyrrolo[2,3-b]pyridine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 120.94 _cell.angle_gamma 90 _cell.entry_id 7B40 _cell.length_a 109.93 _cell.length_b 42.47 _cell.length_c 86.08 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B40 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H23 N5' _chem_comp.formula_weight 357.452 _chem_comp.id SWN _chem_comp.mon_nstd_flag . _chem_comp.name 3-(phenylmethyl)-5-(1-piperidin-4-ylpyrazol-4-yl)-1~{H}-pyrrolo[2,3-b]pyridine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C4 SWN doub 290 n y C3 C2 SWN sing 291 n y C4 C5 SWN sing 292 n y C2 C1 SWN doub 293 n y C5 C6 SWN doub 294 n y C1 C6 SWN sing 295 n y C1 C SWN sing 296 n n C C7 SWN sing 297 n n C8 C7 SWN doub 298 n y C8 N SWN sing 299 n y C7 C13 SWN sing 300 n y N C9 SWN sing 301 n y C13 C9 SWN doub 302 n y C13 C12 SWN sing 303 n y C9 N1 SWN sing 304 n y C12 C11 SWN doub 305 n y C15 C14 SWN sing 306 n y C15 N2 SWN doub 307 n y N1 C10 SWN doub 308 n y C11 C10 SWN sing 309 n y C11 C14 SWN sing 310 n n C14 C16 SWN doub 311 n y N2 N3 SWN sing 312 n y C18 C19 SWN sing 313 n n C18 C17 SWN sing 314 n n N3 C16 SWN sing 315 n y N3 C17 SWN sing 316 n n C19 N4 SWN sing 317 n n C17 C21 SWN sing 318 n n N4 C20 SWN sing 319 n n C21 C20 SWN sing 320 n n C2 H1 SWN sing 321 n n C3 H2 SWN sing 322 n n C8 H3 SWN sing 323 n n C10 H4 SWN sing 324 n n C12 H5 SWN sing 325 n n C15 H6 SWN sing 326 n n C16 H7 SWN sing 327 n n C19 H8 SWN sing 328 n n C19 H9 SWN sing 329 n n C20 H10 SWN sing 330 n n C20 H11 SWN sing 331 n n C21 H12 SWN sing 332 n n C21 H13 SWN sing 333 n n N4 H14 SWN sing 334 n n C18 H16 SWN sing 335 n n C18 H17 SWN sing 336 n n C17 H18 SWN sing 337 n n N H19 SWN sing 338 n n C H20 SWN sing 339 n n C H21 SWN sing 340 n n C6 H22 SWN sing 341 n n C5 H23 SWN sing 342 n n C4 H24 SWN sing 343 n n # _atom_sites.entry_id 7B40 _atom_sites.fract_transf_matrix[1][1] 0.009097 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005453 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023546 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SWN A 1 1401 1 SWN INH . C 3 HOH A 1 1501 193 HOH HOH . C 3 HOH A 2 1502 205 HOH HOH . C 3 HOH A 3 1503 201 HOH HOH . C 3 HOH A 4 1504 61 HOH HOH . C 3 HOH A 5 1505 21 HOH HOH . C 3 HOH A 6 1506 195 HOH HOH . C 3 HOH A 7 1507 194 HOH HOH . C 3 HOH A 8 1508 147 HOH HOH . C 3 HOH A 9 1509 12 HOH HOH . C 3 HOH A 10 1510 90 HOH HOH . C 3 HOH A 11 1511 22 HOH HOH . C 3 HOH A 12 1512 74 HOH HOH . C 3 HOH A 13 1513 7 HOH HOH . C 3 HOH A 14 1514 57 HOH HOH . C 3 HOH A 15 1515 39 HOH HOH . C 3 HOH A 16 1516 199 HOH HOH . C 3 HOH A 17 1517 185 HOH HOH . C 3 HOH A 18 1518 80 HOH HOH . C 3 HOH A 19 1519 206 HOH HOH . C 3 HOH A 20 1520 93 HOH HOH . C 3 HOH A 21 1521 73 HOH HOH . C 3 HOH A 22 1522 5 HOH HOH . C 3 HOH A 23 1523 66 HOH HOH . C 3 HOH A 24 1524 149 HOH HOH . C 3 HOH A 25 1525 8 HOH HOH . C 3 HOH A 26 1526 203 HOH HOH . C 3 HOH A 27 1527 101 HOH HOH . C 3 HOH A 28 1528 3 HOH HOH . C 3 HOH A 29 1529 10 HOH HOH . C 3 HOH A 30 1530 81 HOH HOH . C 3 HOH A 31 1531 4 HOH HOH . C 3 HOH A 32 1532 96 HOH HOH . C 3 HOH A 33 1533 15 HOH HOH . C 3 HOH A 34 1534 35 HOH HOH . C 3 HOH A 35 1535 13 HOH HOH . C 3 HOH A 36 1536 142 HOH HOH . C 3 HOH A 37 1537 143 HOH HOH . C 3 HOH A 38 1538 69 HOH HOH . C 3 HOH A 39 1539 71 HOH HOH . C 3 HOH A 40 1540 2 HOH HOH . C 3 HOH A 41 1541 200 HOH HOH . C 3 HOH A 42 1542 40 HOH HOH . C 3 HOH A 43 1543 26 HOH HOH . C 3 HOH A 44 1544 27 HOH HOH . C 3 HOH A 45 1545 179 HOH HOH . C 3 HOH A 46 1546 146 HOH HOH . C 3 HOH A 47 1547 110 HOH HOH . C 3 HOH A 48 1548 175 HOH HOH . C 3 HOH A 49 1549 30 HOH HOH . C 3 HOH A 50 1550 54 HOH HOH . C 3 HOH A 51 1551 51 HOH HOH . C 3 HOH A 52 1552 148 HOH HOH . C 3 HOH A 53 1553 59 HOH HOH . C 3 HOH A 54 1554 65 HOH HOH . C 3 HOH A 55 1555 9 HOH HOH . C 3 HOH A 56 1556 198 HOH HOH . C 3 HOH A 57 1557 157 HOH HOH . C 3 HOH A 58 1558 68 HOH HOH . C 3 HOH A 59 1559 166 HOH HOH . C 3 HOH A 60 1560 16 HOH HOH . C 3 HOH A 61 1561 114 HOH HOH . C 3 HOH A 62 1562 115 HOH HOH . C 3 HOH A 63 1563 20 HOH HOH . C 3 HOH A 64 1564 19 HOH HOH . C 3 HOH A 65 1565 72 HOH HOH . C 3 HOH A 66 1566 14 HOH HOH . C 3 HOH A 67 1567 23 HOH HOH . C 3 HOH A 68 1568 106 HOH HOH . C 3 HOH A 69 1569 37 HOH HOH . C 3 HOH A 70 1570 192 HOH HOH . C 3 HOH A 71 1571 85 HOH HOH . C 3 HOH A 72 1572 150 HOH HOH . C 3 HOH A 73 1573 6 HOH HOH . C 3 HOH A 74 1574 100 HOH HOH . C 3 HOH A 75 1575 124 HOH HOH . C 3 HOH A 76 1576 41 HOH HOH . C 3 HOH A 77 1577 130 HOH HOH . C 3 HOH A 78 1578 129 HOH HOH . C 3 HOH A 79 1579 126 HOH HOH . C 3 HOH A 80 1580 31 HOH HOH . C 3 HOH A 81 1581 144 HOH HOH . C 3 HOH A 82 1582 84 HOH HOH . C 3 HOH A 83 1583 95 HOH HOH . C 3 HOH A 84 1584 79 HOH HOH . C 3 HOH A 85 1585 45 HOH HOH . C 3 HOH A 86 1586 182 HOH HOH . C 3 HOH A 87 1587 36 HOH HOH . C 3 HOH A 88 1588 34 HOH HOH . C 3 HOH A 89 1589 102 HOH HOH . C 3 HOH A 90 1590 207 HOH HOH . C 3 HOH A 91 1591 49 HOH HOH . C 3 HOH A 92 1592 163 HOH HOH . C 3 HOH A 93 1593 78 HOH HOH . C 3 HOH A 94 1594 53 HOH HOH . C 3 HOH A 95 1595 186 HOH HOH . C 3 HOH A 96 1596 28 HOH HOH . C 3 HOH A 97 1597 202 HOH HOH . C 3 HOH A 98 1598 133 HOH HOH . C 3 HOH A 99 1599 75 HOH HOH . C 3 HOH A 100 1600 134 HOH HOH . C 3 HOH A 101 1601 64 HOH HOH . C 3 HOH A 102 1602 117 HOH HOH . C 3 HOH A 103 1603 156 HOH HOH . C 3 HOH A 104 1604 103 HOH HOH . C 3 HOH A 105 1605 17 HOH HOH . C 3 HOH A 106 1606 153 HOH HOH . C 3 HOH A 107 1607 112 HOH HOH . C 3 HOH A 108 1608 109 HOH HOH . C 3 HOH A 109 1609 62 HOH HOH . C 3 HOH A 110 1610 108 HOH HOH . C 3 HOH A 111 1611 151 HOH HOH . C 3 HOH A 112 1612 113 HOH HOH . C 3 HOH A 113 1613 76 HOH HOH . C 3 HOH A 114 1614 25 HOH HOH . C 3 HOH A 115 1615 47 HOH HOH . C 3 HOH A 116 1616 127 HOH HOH . C 3 HOH A 117 1617 67 HOH HOH . C 3 HOH A 118 1618 180 HOH HOH . C 3 HOH A 119 1619 92 HOH HOH . C 3 HOH A 120 1620 46 HOH HOH . C 3 HOH A 121 1621 184 HOH HOH . C 3 HOH A 122 1622 33 HOH HOH . C 3 HOH A 123 1623 29 HOH HOH . C 3 HOH A 124 1624 123 HOH HOH . C 3 HOH A 125 1625 162 HOH HOH . C 3 HOH A 126 1626 58 HOH HOH . C 3 HOH A 127 1627 89 HOH HOH . C 3 HOH A 128 1628 18 HOH HOH . C 3 HOH A 129 1629 104 HOH HOH . C 3 HOH A 130 1630 70 HOH HOH . C 3 HOH A 131 1631 87 HOH HOH . C 3 HOH A 132 1632 137 HOH HOH . C 3 HOH A 133 1633 42 HOH HOH . C 3 HOH A 134 1634 141 HOH HOH . C 3 HOH A 135 1635 44 HOH HOH . C 3 HOH A 136 1636 60 HOH HOH . C 3 HOH A 137 1637 187 HOH HOH . C 3 HOH A 138 1638 178 HOH HOH . C 3 HOH A 139 1639 56 HOH HOH . C 3 HOH A 140 1640 204 HOH HOH . C 3 HOH A 141 1641 136 HOH HOH . C 3 HOH A 142 1642 118 HOH HOH . C 3 HOH A 143 1643 94 HOH HOH . C 3 HOH A 144 1644 135 HOH HOH . C 3 HOH A 145 1645 172 HOH HOH . C 3 HOH A 146 1646 197 HOH HOH . C 3 HOH A 147 1647 169 HOH HOH . C 3 HOH A 148 1648 105 HOH HOH . C 3 HOH A 149 1649 82 HOH HOH . C 3 HOH A 150 1650 125 HOH HOH . C 3 HOH A 151 1651 155 HOH HOH . C 3 HOH A 152 1652 98 HOH HOH . C 3 HOH A 153 1653 196 HOH HOH . C 3 HOH A 154 1654 83 HOH HOH . C 3 HOH A 155 1655 120 HOH HOH . C 3 HOH A 156 1656 131 HOH HOH . C 3 HOH A 157 1657 32 HOH HOH . C 3 HOH A 158 1658 176 HOH HOH . C 3 HOH A 159 1659 43 HOH HOH . C 3 HOH A 160 1660 190 HOH HOH . C 3 HOH A 161 1661 122 HOH HOH . C 3 HOH A 162 1662 170 HOH HOH . C 3 HOH A 163 1663 161 HOH HOH . C 3 HOH A 164 1664 77 HOH HOH . C 3 HOH A 165 1665 86 HOH HOH . C 3 HOH A 166 1666 52 HOH HOH . C 3 HOH A 167 1667 183 HOH HOH . C 3 HOH A 168 1668 139 HOH HOH . C 3 HOH A 169 1669 168 HOH HOH . C 3 HOH A 170 1670 111 HOH HOH . C 3 HOH A 171 1671 158 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SWN . . . B 2 193.532 -32.377 82.771 1 42.1 ? C1 SWN 1401 A 1 HETATM 2 C C2 SWN . . . B 2 193.977 -32.754 81.512 1 44.42 ? C2 SWN 1401 A 1 HETATM 3 C C3 SWN . . . B 2 193.121 -32.721 80.421 1 45.01 ? C3 SWN 1401 A 1 HETATM 4 C C7 SWN . . . B 2 195.381 -31.243 84.172 1 38.33 ? C7 SWN 1401 A 1 HETATM 5 C C8 SWN . . . B 2 195.078 -29.913 84.099 1 34.99 ? C8 SWN 1401 A 1 HETATM 6 C C9 SWN . . . B 2 197.237 -30.001 84.614 1 30.28 ? C9 SWN 1401 A 1 HETATM 7 C C10 SWN . . . B 2 199.338 -30.647 85.12 1 30.38 ? C10 SWN 1401 A 1 HETATM 8 C C11 SWN . . . B 2 199.001 -32 85.036 1 32.79 ? C11 SWN 1401 A 1 HETATM 9 C C12 SWN . . . B 2 197.685 -32.34 84.725 1 32.43 ? C12 SWN 1401 A 1 HETATM 10 C C13 SWN . . . B 2 196.774 -31.313 84.506 1 34.37 ? C13 SWN 1401 A 1 HETATM 11 C C14 SWN . . . B 2 200.002 -33.053 85.3 1 34.99 ? C14 SWN 1401 A 1 HETATM 12 C C15 SWN . . . B 2 200.039 -34.394 84.875 1 37.7 ? C15 SWN 1401 A 1 HETATM 13 C C16 SWN . . . B 2 201.13 -32.912 86.068 1 38.3 ? C16 SWN 1401 A 1 HETATM 14 C C19 SWN . . . B 2 205.471 -34.728 86.752 1 47.37 ? C19 SWN 1401 A 1 HETATM 15 C C20 SWN . . . B 2 204.187 -35.241 88.783 1 48.48 ? C20 SWN 1401 A 1 HETATM 16 C C21 SWN . . . B 2 202.886 -35.243 87.998 1 46.51 ? C21 SWN 1401 A 1 HETATM 17 N N4 SWN . . . B 2 205.323 -35.637 87.917 1 47.51 ? N4 SWN 1401 A 1 HETATM 18 C C18 SWN . . . B 2 204.209 -34.73 85.911 1 47.07 ? C18 SWN 1401 A 1 HETATM 19 C C17 SWN . . . B 2 203.01 -34.349 86.769 1 44.08 ? C17 SWN 1401 A 1 HETATM 20 N N3 SWN . . . B 2 201.76 -34.095 86.065 1 40.97 ? N3 SWN 1401 A 1 HETATM 21 N N2 SWN . . . B 2 201.105 -35.03 85.333 1 39.85 ? N2 SWN 1401 A 1 HETATM 22 N N1 SWN . . . B 2 198.484 -29.628 84.91 1 30.84 ? N1 SWN 1401 A 1 HETATM 23 N N SWN . . . B 2 196.196 -29.156 84.363 1 33.05 ? N SWN 1401 A 1 HETATM 24 C C SWN . . . B 2 194.456 -32.416 83.964 1 42.19 ? C SWN 1401 A 1 HETATM 25 C C6 SWN . . . B 2 192.212 -31.97 82.911 1 41.95 ? C6 SWN 1401 A 1 HETATM 26 C C5 SWN . . . B 2 191.359 -31.938 81.818 1 42.48 ? C5 SWN 1401 A 1 HETATM 27 C C4 SWN . . . B 2 191.812 -32.311 80.574 1 43.79 ? C4 SWN 1401 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 27 #