data_7B51 # _model_server_result.job_id iEu7FmOuPW2fe7TyA1wORA _model_server_result.datetime_utc '2025-09-22 22:37:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b51 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7B51 # _exptl.entry_id 7B51 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 523.18 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7B51 _cell.length_a 121.111 _cell.length_b 150.591 _cell.length_c 231.969 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B51 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 542 A CYS 528 1_555 E S2 BME . A BME 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc1 A OG1 THR 26 B THR 24 1_555 D MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc2 A OG1 THR 44 B THR 42 1_555 D MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc3 C O3G GTP . B GTP 201 1_555 D MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc4 C O1B GTP . B GTP 201 1_555 D MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? # _chem_comp.formula 'C10 H16 N5 O14 P3' _chem_comp.formula_weight 523.18 _chem_comp.id GTP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G GTP doub 138 n n PG O2G GTP sing 139 n n PG O3G GTP sing 140 n n PG O3B GTP sing 141 n n O2G HOG2 GTP sing 142 n n O3G HOG3 GTP sing 143 n n O3B PB GTP sing 144 n n PB O1B GTP doub 145 n n PB O2B GTP sing 146 n n PB O3A GTP sing 147 n n O2B HOB2 GTP sing 148 n n O3A PA GTP sing 149 n n PA O1A GTP doub 150 n n PA O2A GTP sing 151 n n PA O5' GTP sing 152 n n O2A HOA2 GTP sing 153 n n O5' C5' GTP sing 154 n n C5' C4' GTP sing 155 n n C5' H5' GTP sing 156 n n C5' "H5''" GTP sing 157 n n C4' O4' GTP sing 158 n n C4' C3' GTP sing 159 n n C4' H4' GTP sing 160 n n O4' C1' GTP sing 161 n n C3' O3' GTP sing 162 n n C3' C2' GTP sing 163 n n C3' H3' GTP sing 164 n n O3' HO3' GTP sing 165 n n C2' O2' GTP sing 166 n n C2' C1' GTP sing 167 n n C2' H2' GTP sing 168 n n O2' HO2' GTP sing 169 n n C1' N9 GTP sing 170 n n C1' H1' GTP sing 171 n n N9 C8 GTP sing 172 n y N9 C4 GTP sing 173 n y C8 N7 GTP doub 174 n y C8 H8 GTP sing 175 n n N7 C5 GTP sing 176 n y C5 C6 GTP sing 177 n n C5 C4 GTP doub 178 n y C6 O6 GTP doub 179 n n C6 N1 GTP sing 180 n n N1 C2 GTP sing 181 n n N1 HN1 GTP sing 182 n n C2 N2 GTP sing 183 n n C2 N3 GTP doub 184 n n N2 HN21 GTP sing 185 n n N2 HN22 GTP sing 186 n n N3 C4 GTP sing 187 n n # _atom_sites.entry_id 7B51 _atom_sites.fract_transf_matrix[1][1] 0.008257 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006641 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004311 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GTP B 1 201 181 GTP GTP . D 4 MG B 1 202 182 MG MG . E 5 BME A 1 1101 1101 BME BME . F 6 HOH B 1 301 89 HOH HOH . F 6 HOH B 2 302 63 HOH HOH . F 6 HOH B 3 303 133 HOH HOH . F 6 HOH B 4 304 196 HOH HOH . F 6 HOH B 5 305 19 HOH HOH . F 6 HOH B 6 306 100 HOH HOH . F 6 HOH B 7 307 94 HOH HOH . F 6 HOH B 8 308 14 HOH HOH . F 6 HOH B 9 309 114 HOH HOH . F 6 HOH B 10 310 78 HOH HOH . F 6 HOH B 11 311 155 HOH HOH . F 6 HOH B 12 312 195 HOH HOH . F 6 HOH B 13 313 137 HOH HOH . F 6 HOH B 14 314 125 HOH HOH . F 6 HOH B 15 315 12 HOH HOH . F 6 HOH B 16 316 291 HOH HOH . F 6 HOH B 17 317 21 HOH HOH . F 6 HOH B 18 318 316 HOH HOH . F 6 HOH B 19 319 118 HOH HOH . F 6 HOH B 20 320 290 HOH HOH . F 6 HOH B 21 321 178 HOH HOH . F 6 HOH B 22 322 48 HOH HOH . F 6 HOH B 23 323 175 HOH HOH . F 6 HOH B 24 324 56 HOH HOH . F 6 HOH B 25 325 214 HOH HOH . G 6 HOH A 1 1201 208 HOH HOH . G 6 HOH A 2 1202 148 HOH HOH . G 6 HOH A 3 1203 2 HOH HOH . G 6 HOH A 4 1204 34 HOH HOH . G 6 HOH A 5 1205 28 HOH HOH . G 6 HOH A 6 1206 202 HOH HOH . G 6 HOH A 7 1207 31 HOH HOH . G 6 HOH A 8 1208 263 HOH HOH . G 6 HOH A 9 1209 43 HOH HOH . G 6 HOH A 10 1210 268 HOH HOH . G 6 HOH A 11 1211 315 HOH HOH . G 6 HOH A 12 1212 36 HOH HOH . G 6 HOH A 13 1213 176 HOH HOH . G 6 HOH A 14 1214 293 HOH HOH . G 6 HOH A 15 1215 151 HOH HOH . G 6 HOH A 16 1216 46 HOH HOH . G 6 HOH A 17 1217 110 HOH HOH . G 6 HOH A 18 1218 69 HOH HOH . G 6 HOH A 19 1219 7 HOH HOH . G 6 HOH A 20 1220 92 HOH HOH . G 6 HOH A 21 1221 55 HOH HOH . G 6 HOH A 22 1222 50 HOH HOH . G 6 HOH A 23 1223 30 HOH HOH . G 6 HOH A 24 1224 218 HOH HOH . G 6 HOH A 25 1225 4 HOH HOH . G 6 HOH A 26 1226 149 HOH HOH . G 6 HOH A 27 1227 26 HOH HOH . G 6 HOH A 28 1228 10 HOH HOH . G 6 HOH A 29 1229 298 HOH HOH . G 6 HOH A 30 1230 81 HOH HOH . G 6 HOH A 31 1231 86 HOH HOH . G 6 HOH A 32 1232 209 HOH HOH . G 6 HOH A 33 1233 282 HOH HOH . G 6 HOH A 34 1234 49 HOH HOH . G 6 HOH A 35 1235 101 HOH HOH . G 6 HOH A 36 1236 25 HOH HOH . G 6 HOH A 37 1237 22 HOH HOH . G 6 HOH A 38 1238 247 HOH HOH . G 6 HOH A 39 1239 161 HOH HOH . G 6 HOH A 40 1240 188 HOH HOH . G 6 HOH A 41 1241 210 HOH HOH . G 6 HOH A 42 1242 57 HOH HOH . G 6 HOH A 43 1243 73 HOH HOH . G 6 HOH A 44 1244 269 HOH HOH . G 6 HOH A 45 1245 321 HOH HOH . G 6 HOH A 46 1246 64 HOH HOH . G 6 HOH A 47 1247 141 HOH HOH . G 6 HOH A 48 1248 256 HOH HOH . G 6 HOH A 49 1249 168 HOH HOH . G 6 HOH A 50 1250 13 HOH HOH . G 6 HOH A 51 1251 241 HOH HOH . G 6 HOH A 52 1252 143 HOH HOH . G 6 HOH A 53 1253 27 HOH HOH . G 6 HOH A 54 1254 62 HOH HOH . G 6 HOH A 55 1255 212 HOH HOH . G 6 HOH A 56 1256 259 HOH HOH . G 6 HOH A 57 1257 67 HOH HOH . G 6 HOH A 58 1258 204 HOH HOH . G 6 HOH A 59 1259 18 HOH HOH . G 6 HOH A 60 1260 242 HOH HOH . G 6 HOH A 61 1261 165 HOH HOH . G 6 HOH A 62 1262 221 HOH HOH . G 6 HOH A 63 1263 160 HOH HOH . G 6 HOH A 64 1264 307 HOH HOH . G 6 HOH A 65 1265 115 HOH HOH . G 6 HOH A 66 1266 226 HOH HOH . G 6 HOH A 67 1267 61 HOH HOH . G 6 HOH A 68 1268 200 HOH HOH . G 6 HOH A 69 1269 24 HOH HOH . G 6 HOH A 70 1270 345 HOH HOH . G 6 HOH A 71 1271 70 HOH HOH . G 6 HOH A 72 1272 144 HOH HOH . G 6 HOH A 73 1273 8 HOH HOH . G 6 HOH A 74 1274 93 HOH HOH . G 6 HOH A 75 1275 225 HOH HOH . G 6 HOH A 76 1276 347 HOH HOH . G 6 HOH A 77 1277 180 HOH HOH . G 6 HOH A 78 1278 189 HOH HOH . G 6 HOH A 79 1279 109 HOH HOH . G 6 HOH A 80 1280 35 HOH HOH . G 6 HOH A 81 1281 228 HOH HOH . G 6 HOH A 82 1282 83 HOH HOH . G 6 HOH A 83 1283 157 HOH HOH . G 6 HOH A 84 1284 41 HOH HOH . G 6 HOH A 85 1285 39 HOH HOH . G 6 HOH A 86 1286 103 HOH HOH . G 6 HOH A 87 1287 146 HOH HOH . G 6 HOH A 88 1288 327 HOH HOH . G 6 HOH A 89 1289 257 HOH HOH . G 6 HOH A 90 1290 206 HOH HOH . G 6 HOH A 91 1291 51 HOH HOH . G 6 HOH A 92 1292 158 HOH HOH . G 6 HOH A 93 1293 90 HOH HOH . G 6 HOH A 94 1294 102 HOH HOH . G 6 HOH A 95 1295 340 HOH HOH . G 6 HOH A 96 1296 20 HOH HOH . G 6 HOH A 97 1297 121 HOH HOH . G 6 HOH A 98 1298 233 HOH HOH . G 6 HOH A 99 1299 186 HOH HOH . G 6 HOH A 100 1300 124 HOH HOH . G 6 HOH A 101 1301 284 HOH HOH . G 6 HOH A 102 1302 220 HOH HOH . G 6 HOH A 103 1303 106 HOH HOH . G 6 HOH A 104 1304 227 HOH HOH . G 6 HOH A 105 1305 179 HOH HOH . G 6 HOH A 106 1306 140 HOH HOH . G 6 HOH A 107 1307 119 HOH HOH . G 6 HOH A 108 1308 302 HOH HOH . G 6 HOH A 109 1309 84 HOH HOH . G 6 HOH A 110 1310 11 HOH HOH . G 6 HOH A 111 1311 237 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG GTP . . . C 3 -1.055 -30.714 -71.524 1 44.38 ? PG GTP 201 B 1 HETATM 2 O O1G GTP . . . C 3 0.219 -30.043 -71.028 1 49.56 ? O1G GTP 201 B 1 HETATM 3 O O2G GTP . . . C 3 -1.447 -30.274 -72.919 1 42.06 ? O2G GTP 201 B 1 HETATM 4 O O3G GTP . . . C 3 -1.016 -32.207 -71.383 1 45.05 ? O3G GTP 201 B 1 HETATM 5 O O3B GTP . . . C 3 -2.191 -30.155 -70.538 1 40.2 ? O3B GTP 201 B 1 HETATM 6 P PB GTP . . . C 3 -3.587 -30.716 -70.003 1 40.49 ? PB GTP 201 B 1 HETATM 7 O O1B GTP . . . C 3 -3.734 -32.18 -70.247 1 39.89 ? O1B GTP 201 B 1 HETATM 8 O O2B GTP . . . C 3 -4.65 -29.779 -70.512 1 45.53 ? O2B GTP 201 B 1 HETATM 9 O O3A GTP . . . C 3 -3.438 -30.434 -68.437 1 43.84 ? O3A GTP 201 B 1 HETATM 10 P PA GTP . . . C 3 -3.839 -31.363 -67.196 1 43.15 ? PA GTP 201 B 1 HETATM 11 O O1A GTP . . . C 3 -2.635 -32.242 -67.007 1 54.87 ? O1A GTP 201 B 1 HETATM 12 O O2A GTP . . . C 3 -5.161 -32.005 -67.397 1 40.01 ? O2A GTP 201 B 1 HETATM 13 O O5' GTP . . . C 3 -3.932 -30.328 -65.996 1 45.37 ? O5' GTP 201 B 1 HETATM 14 C C5' GTP . . . C 3 -4.988 -29.388 -65.837 1 44.26 ? C5' GTP 201 B 1 HETATM 15 C C4' GTP . . . C 3 -4.799 -28.758 -64.479 1 42.53 ? C4' GTP 201 B 1 HETATM 16 O O4' GTP . . . C 3 -6.007 -28.028 -64.144 1 40.46 ? O4' GTP 201 B 1 HETATM 17 C C3' GTP . . . C 3 -4.599 -29.749 -63.317 1 44.19 ? C3' GTP 201 B 1 HETATM 18 O O3' GTP . . . C 3 -3.942 -29.196 -62.188 1 41.62 ? O3' GTP 201 B 1 HETATM 19 C C2' GTP . . . C 3 -6.039 -30.032 -62.889 1 40.69 ? C2' GTP 201 B 1 HETATM 20 O O2' GTP . . . C 3 -6.159 -30.482 -61.561 1 41.43 ? O2' GTP 201 B 1 HETATM 21 C C1' GTP . . . C 3 -6.727 -28.695 -63.125 1 37.58 ? C1' GTP 201 B 1 HETATM 22 N N9 GTP . . . C 3 -8.1 -28.857 -63.586 1 40.73 ? N9 GTP 201 B 1 HETATM 23 C C8 GTP . . . C 3 -8.559 -29.699 -64.57 1 40.7 ? C8 GTP 201 B 1 HETATM 24 N N7 GTP . . . C 3 -9.856 -29.598 -64.764 1 40.09 ? N7 GTP 201 B 1 HETATM 25 C C5 GTP . . . C 3 -10.284 -28.684 -63.813 1 42.79 ? C5 GTP 201 B 1 HETATM 26 C C6 GTP . . . C 3 -11.591 -28.209 -63.499 1 49.21 ? C6 GTP 201 B 1 HETATM 27 O O6 GTP . . . C 3 -12.674 -28.525 -64.001 1 51.99 ? O6 GTP 201 B 1 HETATM 28 N N1 GTP . . . C 3 -11.573 -27.288 -62.448 1 51.56 ? N1 GTP 201 B 1 HETATM 29 C C2 GTP . . . C 3 -10.439 -26.899 -61.77 1 48.41 ? C2 GTP 201 B 1 HETATM 30 N N2 GTP . . . C 3 -10.601 -26.021 -60.779 1 44.72 ? N2 GTP 201 B 1 HETATM 31 N N3 GTP . . . C 3 -9.216 -27.331 -62.068 1 47.45 ? N3 GTP 201 B 1 HETATM 32 C C4 GTP . . . C 3 -9.21 -28.221 -63.088 1 42.17 ? C4 GTP 201 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #