data_7B5O # _model_server_result.job_id 9XzYvri3lqYhjlTj28R6BQ _model_server_result.datetime_utc '2024-11-26 14:07:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b5o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 7B5O # _exptl.entry_id 7B5O _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 394.513 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7B5O _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B5O _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H30 N6 O' _chem_comp.formula_weight 394.513 _chem_comp.id I74 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C15 I74 doub 152 n y C14 C13 I74 sing 153 n y C15 C16 I74 sing 154 n y C13 C12 I74 doub 155 n y C16 C17 I74 doub 156 n y C12 C17 I74 sing 157 n y C12 C11 I74 sing 158 n n N10 C11 I74 sing 159 n n N10 C3 I74 sing 160 n n N1 C9 I74 doub 161 n y N1 N2 I74 sing 162 n y C9 C8 I74 sing 163 n y C3 N2 I74 sing 164 n y C3 C4 I74 doub 165 n y N2 C7 I74 sing 166 n y C4 C5 I74 sing 167 n y C8 C7 I74 doub 168 n y C8 C26 I74 sing 169 n n C7 N6 I74 sing 170 n y C28 C26 I74 sing 171 n n C26 C27 I74 sing 172 n n C5 N6 I74 doub 173 n y C5 N18 I74 sing 174 n n N18 C40 I74 sing 175 n n C40 C41 I74 sing 176 n n C41 C46 I74 sing 177 n n C41 C42 I74 sing 178 n n C46 C45 I74 sing 179 n n O1 C42 I74 sing 180 n n C42 C43 I74 sing 181 n n C45 N44 I74 sing 182 n n C43 N44 I74 sing 183 n n O1 H1 I74 sing 184 n n C42 H2 I74 sing 185 n n C43 H3 I74 sing 186 n n C43 H4 I74 sing 187 n n N44 H5 I74 sing 188 n n C45 H7 I74 sing 189 n n C45 H8 I74 sing 190 n n C46 H9 I74 sing 191 n n C46 H10 I74 sing 192 n n C41 H11 I74 sing 193 n n C40 H12 I74 sing 194 n n C40 H13 I74 sing 195 n n N18 H14 I74 sing 196 n n C4 H15 I74 sing 197 n n C9 H16 I74 sing 198 n n C26 H17 I74 sing 199 n n C28 H18 I74 sing 200 n n C28 H19 I74 sing 201 n n C28 H20 I74 sing 202 n n C27 H21 I74 sing 203 n n C27 H22 I74 sing 204 n n C27 H23 I74 sing 205 n n N10 H24 I74 sing 206 n n C11 H25 I74 sing 207 n n C11 H26 I74 sing 208 n n C17 H27 I74 sing 209 n n C16 H28 I74 sing 210 n n C15 H29 I74 sing 211 n n C14 H30 I74 sing 212 n n C13 H31 I74 sing 213 n n # _atom_sites.entry_id 7B5O _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 I74 J 1 401 401 I74 LIG . E 5 HOH H 1 401 25 HOH HOH . E 5 HOH H 2 402 63 HOH HOH . E 5 HOH H 3 403 64 HOH HOH . E 5 HOH H 4 404 18 HOH HOH . F 5 HOH I 1 401 8 HOH HOH . F 5 HOH I 2 402 13 HOH HOH . F 5 HOH I 3 403 73 HOH HOH . F 5 HOH I 4 404 3 HOH HOH . F 5 HOH I 5 405 57 HOH HOH . F 5 HOH I 6 406 72 HOH HOH . F 5 HOH I 7 407 41 HOH HOH . F 5 HOH I 8 408 9 HOH HOH . F 5 HOH I 9 409 10 HOH HOH . F 5 HOH I 10 410 6 HOH HOH . F 5 HOH I 11 411 37 HOH HOH . F 5 HOH I 12 412 38 HOH HOH . F 5 HOH I 13 413 7 HOH HOH . F 5 HOH I 14 414 35 HOH HOH . F 5 HOH I 15 415 14 HOH HOH . F 5 HOH I 16 416 4 HOH HOH . F 5 HOH I 17 417 34 HOH HOH . F 5 HOH I 18 418 5 HOH HOH . F 5 HOH I 19 419 69 HOH HOH . F 5 HOH I 20 420 59 HOH HOH . F 5 HOH I 21 421 40 HOH HOH . F 5 HOH I 22 422 17 HOH HOH . F 5 HOH I 23 423 16 HOH HOH . F 5 HOH I 24 424 60 HOH HOH . F 5 HOH I 25 425 66 HOH HOH . F 5 HOH I 26 426 15 HOH HOH . F 5 HOH I 27 427 36 HOH HOH . F 5 HOH I 28 428 39 HOH HOH . G 5 HOH J 1 501 1 HOH HOH . G 5 HOH J 2 502 50 HOH HOH . G 5 HOH J 3 503 11 HOH HOH . G 5 HOH J 4 504 68 HOH HOH . G 5 HOH J 5 505 22 HOH HOH . G 5 HOH J 6 506 30 HOH HOH . G 5 HOH J 7 507 62 HOH HOH . G 5 HOH J 8 508 44 HOH HOH . G 5 HOH J 9 509 2 HOH HOH . G 5 HOH J 10 510 27 HOH HOH . G 5 HOH J 11 511 28 HOH HOH . G 5 HOH J 12 512 67 HOH HOH . G 5 HOH J 13 513 20 HOH HOH . G 5 HOH J 14 514 71 HOH HOH . G 5 HOH J 15 515 45 HOH HOH . G 5 HOH J 16 516 26 HOH HOH . G 5 HOH J 17 517 12 HOH HOH . G 5 HOH J 18 518 42 HOH HOH . G 5 HOH J 19 519 61 HOH HOH . G 5 HOH J 20 520 70 HOH HOH . G 5 HOH J 21 521 19 HOH HOH . G 5 HOH J 22 522 49 HOH HOH . G 5 HOH J 23 523 24 HOH HOH . G 5 HOH J 24 524 33 HOH HOH . G 5 HOH J 25 525 29 HOH HOH . G 5 HOH J 26 526 46 HOH HOH . G 5 HOH J 27 527 31 HOH HOH . G 5 HOH J 28 528 65 HOH HOH . G 5 HOH J 29 529 51 HOH HOH . G 5 HOH J 30 530 47 HOH HOH . G 5 HOH J 31 531 23 HOH HOH . G 5 HOH J 32 532 56 HOH HOH . G 5 HOH J 33 533 52 HOH HOH . G 5 HOH J 34 534 21 HOH HOH . G 5 HOH J 35 535 58 HOH HOH . G 5 HOH J 36 536 43 HOH HOH . G 5 HOH J 37 537 55 HOH HOH . G 5 HOH J 38 538 48 HOH HOH . G 5 HOH J 39 539 53 HOH HOH . G 5 HOH J 40 540 32 HOH HOH . G 5 HOH J 41 541 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 I74 . A . D 4 82.44 67.338 59.726 0.5 35.84 ? O1 I74 401 J 1 HETATM 2 O O1 I74 . B . D 4 86.299 66.917 62.3 0.5 35.84 ? O1 I74 401 J 1 HETATM 3 C C42 I74 . A . D 4 83.568 67.93 60.309 0.5 35.84 ? C42 I74 401 J 1 HETATM 4 C C42 I74 . B . D 4 84.955 67.27 62.122 0.5 35.84 ? C42 I74 401 J 1 HETATM 5 C C43 I74 . A . D 4 83.124 69.082 61.21 0.5 35.84 ? C43 I74 401 J 1 HETATM 6 C C43 I74 . B . D 4 84.659 68.648 62.733 0.5 35.84 ? C43 I74 401 J 1 HETATM 7 N N44 I74 . A . D 4 84.279 69.648 61.946 0.5 35.84 ? N44 I74 401 J 1 HETATM 8 N N44 I74 . B . D 4 84.121 69.618 61.734 0.5 35.84 ? N44 I74 401 J 1 HETATM 9 C C45 I74 . A . D 4 85.015 68.627 62.732 0.5 35.84 ? C45 I74 401 J 1 HETATM 10 C C45 I74 . B . D 4 82.958 69.091 60.964 0.5 35.84 ? C45 I74 401 J 1 HETATM 11 C C46 I74 . A . D 4 85.481 67.455 61.868 0.5 35.84 ? C46 I74 401 J 1 HETATM 12 C C46 I74 . B . D 4 83.199 67.671 60.44 0.5 35.84 ? C46 I74 401 J 1 HETATM 13 C C41 I74 . A . D 4 84.401 66.893 61.005 0.5 35.84 ? C41 I74 401 J 1 HETATM 14 C C41 I74 . B . D 4 84.615 67.262 60.672 0.5 35.84 ? C41 I74 401 J 1 HETATM 15 C C40 I74 . A . D 4 84.972 65.857 60.016 0.5 35.84 ? C40 I74 401 J 1 HETATM 16 C C40 I74 . B . D 4 85.001 65.952 59.969 0.5 35.84 ? C40 I74 401 J 1 HETATM 17 N N18 I74 . A . D 4 85.899 66.418 59.046 0.5 35.84 ? N18 I74 401 J 1 HETATM 18 N N18 I74 . B . D 4 85.954 66.291 58.927 0.5 35.84 ? N18 I74 401 J 1 HETATM 19 C C5 I74 . A . D 4 85.419 66.823 57.75 0.5 35.84 ? C5 I74 401 J 1 HETATM 20 C C5 I74 . B . D 4 85.449 66.757 57.666 0.5 35.84 ? C5 I74 401 J 1 HETATM 21 C C4 I74 . A . D 4 86.297 67.41 56.851 0.5 35.84 ? C4 I74 401 J 1 HETATM 22 C C4 I74 . B . D 4 86.313 67.367 56.77 0.5 35.84 ? C4 I74 401 J 1 HETATM 23 C C3 I74 . A . D 4 85.806 67.789 55.62 0.5 35.84 ? C3 I74 401 J 1 HETATM 24 C C3 I74 . B . D 4 85.797 67.786 55.565 0.5 35.84 ? C3 I74 401 J 1 HETATM 25 N N2 I74 . A . D 4 84.506 67.56 55.367 0.5 35.84 ? N2 I74 401 J 1 HETATM 26 N N2 I74 . B . D 4 84.488 67.567 55.33 0.5 35.84 ? N2 I74 401 J 1 HETATM 27 N N1 I74 . A . D 4 83.809 67.858 54.204 0.5 35.84 ? N1 I74 401 J 1 HETATM 28 N N1 I74 . B . D 4 83.764 67.896 54.192 0.5 35.84 ? N1 I74 401 J 1 HETATM 29 C C9 I74 . A . D 4 82.57 67.449 54.381 0.5 35.84 ? C9 I74 401 J 1 HETATM 30 C C9 I74 . B . D 4 82.528 67.484 54.387 0.5 35.84 ? C9 I74 401 J 1 HETATM 31 C C8 I74 . A . D 4 82.422 66.891 55.639 0.5 35.84 ? C8 I74 401 J 1 HETATM 32 C C8 I74 . B . D 4 82.405 66.895 55.634 0.5 35.84 ? C8 I74 401 J 1 HETATM 33 C C26 I74 . A . D 4 81.136 66.288 56.194 0.5 35.84 ? C26 I74 401 J 1 HETATM 34 C C26 I74 . B . D 4 81.132 66.278 56.208 0.5 35.84 ? C26 I74 401 J 1 HETATM 35 C C28 I74 . A . D 4 81.329 64.951 56.894 0.5 35.84 ? C28 I74 401 J 1 HETATM 36 C C28 I74 . B . D 4 81.339 64.882 56.776 0.5 35.84 ? C28 I74 401 J 1 HETATM 37 C C27 I74 . A . D 4 80.24 67.231 56.961 0.5 35.84 ? C27 I74 401 J 1 HETATM 38 C C27 I74 . B . D 4 80.326 67.161 57.135 0.5 35.84 ? C27 I74 401 J 1 HETATM 39 C C7 I74 . A . D 4 83.706 66.992 56.232 0.5 35.84 ? C7 I74 401 J 1 HETATM 40 C C7 I74 . B . D 4 83.705 66.978 56.196 0.5 35.84 ? C7 I74 401 J 1 HETATM 41 N N6 I74 . A . D 4 84.154 66.623 57.442 0.5 35.84 ? N6 I74 401 J 1 HETATM 42 N N6 I74 . B . D 4 84.177 66.574 57.384 0.5 35.84 ? N6 I74 401 J 1 HETATM 43 N N10 I74 . A . D 4 86.638 68.422 54.616 0.5 35.84 ? N10 I74 401 J 1 HETATM 44 N N10 I74 . B . D 4 86.621 68.444 54.57 0.5 35.84 ? N10 I74 401 J 1 HETATM 45 C C11 I74 . A . D 4 88.047 68.685 54.839 0.5 35.84 ? C11 I74 401 J 1 HETATM 46 C C11 I74 . B . D 4 88.031 68.703 54.796 0.5 35.84 ? C11 I74 401 J 1 HETATM 47 C C12 I74 . A . D 4 88.268 69.784 55.886 0.5 35.84 ? C12 I74 401 J 1 HETATM 48 C C12 I74 . B . D 4 88.259 69.787 55.856 0.5 35.84 ? C12 I74 401 J 1 HETATM 49 C C17 I74 . A . D 4 89.547 69.998 56.352 0.5 35.84 ? C17 I74 401 J 1 HETATM 50 C C17 I74 . B . D 4 89.539 69.992 56.321 0.5 35.84 ? C17 I74 401 J 1 HETATM 51 C C16 I74 . A . D 4 89.787 70.975 57.298 0.5 35.84 ? C16 I74 401 J 1 HETATM 52 C C16 I74 . B . D 4 89.786 70.956 57.278 0.5 35.84 ? C16 I74 401 J 1 HETATM 53 C C15 I74 . A . D 4 88.747 71.74 57.785 0.5 35.84 ? C15 I74 401 J 1 HETATM 54 C C15 I74 . B . D 4 88.749 71.719 57.778 0.5 35.84 ? C15 I74 401 J 1 HETATM 55 C C14 I74 . A . D 4 87.465 71.528 57.322 0.5 35.84 ? C14 I74 401 J 1 HETATM 56 C C14 I74 . B . D 4 87.466 71.517 57.317 0.5 35.84 ? C14 I74 401 J 1 HETATM 57 C C13 I74 . A . D 4 87.226 70.559 56.368 0.5 35.84 ? C13 I74 401 J 1 HETATM 58 C C13 I74 . B . D 4 87.22 70.56 56.351 0.5 35.84 ? C13 I74 401 J 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 52 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 58 #