data_7B60 # _model_server_result.job_id jdtT0epdr3Rsdc4k5pKogA _model_server_result.datetime_utc '2024-11-24 16:09:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b60 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 7B60 # _exptl.entry_id 7B60 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 97.27 _cell.angle_beta 91.53 _cell.angle_gamma 105.61 _cell.entry_id 7B60 _cell.length_a 58.249 _cell.length_b 58.382 _cell.length_c 74.027 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B60 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomer 1 author_and_software_defined_assembly 1 PISA monomer 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7B60 _atom_sites.fract_transf_matrix[1][1] 0.017168 _atom_sites.fract_transf_matrix[1][2] 0.004796 _atom_sites.fract_transf_matrix[1][3] 0.001134 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017784 _atom_sites.fract_transf_matrix[2][3] 0.002493 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013645 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 O3D A 1 501 501 O3D LIG . D 2 O3D A 1 502 601 O3D LIG . E 3 DMS A 1 503 701 DMS DMS . F 2 O3D B 1 501 501 O3D LIG . G 3 DMS B 1 502 601 DMS DMS . H 4 IPA B 1 503 801 IPA IPA . I 4 IPA B 1 504 1001 IPA IPA . J 5 HOH A 1 601 378 HOH HOH . J 5 HOH A 2 602 647 HOH HOH . J 5 HOH A 3 603 170 HOH HOH . J 5 HOH A 4 604 622 HOH HOH . J 5 HOH A 5 605 78 HOH HOH . J 5 HOH A 6 606 308 HOH HOH . J 5 HOH A 7 607 64 HOH HOH . J 5 HOH A 8 608 504 HOH HOH . J 5 HOH A 9 609 652 HOH HOH . J 5 HOH A 10 610 56 HOH HOH . J 5 HOH A 11 611 590 HOH HOH . J 5 HOH A 12 612 175 HOH HOH . J 5 HOH A 13 613 221 HOH HOH . J 5 HOH A 14 614 502 HOH HOH . J 5 HOH A 15 615 287 HOH HOH . J 5 HOH A 16 616 77 HOH HOH . J 5 HOH A 17 617 505 HOH HOH . J 5 HOH A 18 618 140 HOH HOH . J 5 HOH A 19 619 664 HOH HOH . J 5 HOH A 20 620 388 HOH HOH . J 5 HOH A 21 621 15 HOH HOH . J 5 HOH A 22 622 638 HOH HOH . J 5 HOH A 23 623 203 HOH HOH . J 5 HOH A 24 624 396 HOH HOH . J 5 HOH A 25 625 62 HOH HOH . J 5 HOH A 26 626 35 HOH HOH . J 5 HOH A 27 627 607 HOH HOH . J 5 HOH A 28 628 194 HOH HOH . J 5 HOH A 29 629 205 HOH HOH . J 5 HOH A 30 630 199 HOH HOH . J 5 HOH A 31 631 57 HOH HOH . J 5 HOH A 32 632 76 HOH HOH . J 5 HOH A 33 633 349 HOH HOH . J 5 HOH A 34 634 365 HOH HOH . J 5 HOH A 35 635 289 HOH HOH . J 5 HOH A 36 636 602 HOH HOH . J 5 HOH A 37 637 642 HOH HOH . J 5 HOH A 38 638 243 HOH HOH . J 5 HOH A 39 639 370 HOH HOH . J 5 HOH A 40 640 230 HOH HOH . J 5 HOH A 41 641 609 HOH HOH . J 5 HOH A 42 642 503 HOH HOH . J 5 HOH A 43 643 364 HOH HOH . J 5 HOH A 44 644 92 HOH HOH . J 5 HOH A 45 645 623 HOH HOH . J 5 HOH A 46 646 12 HOH HOH . J 5 HOH A 47 647 223 HOH HOH . J 5 HOH A 48 648 211 HOH HOH . J 5 HOH A 49 649 242 HOH HOH . J 5 HOH A 50 650 204 HOH HOH . J 5 HOH A 51 651 608 HOH HOH . J 5 HOH A 52 652 206 HOH HOH . J 5 HOH A 53 653 210 HOH HOH . J 5 HOH A 54 654 60 HOH HOH . J 5 HOH A 55 655 235 HOH HOH . J 5 HOH A 56 656 507 HOH HOH . J 5 HOH A 57 657 220 HOH HOH . J 5 HOH A 58 658 63 HOH HOH . J 5 HOH A 59 659 16 HOH HOH . J 5 HOH A 60 660 48 HOH HOH . J 5 HOH A 61 661 666 HOH HOH . J 5 HOH A 62 662 404 HOH HOH . J 5 HOH A 63 663 383 HOH HOH . J 5 HOH A 64 664 43 HOH HOH . J 5 HOH A 65 665 629 HOH HOH . J 5 HOH A 66 666 371 HOH HOH . J 5 HOH A 67 667 429 HOH HOH . J 5 HOH A 68 668 635 HOH HOH . J 5 HOH A 69 669 630 HOH HOH . J 5 HOH A 70 670 17 HOH HOH . J 5 HOH A 71 671 34 HOH HOH . J 5 HOH A 72 672 382 HOH HOH . J 5 HOH A 73 673 169 HOH HOH . J 5 HOH A 74 674 79 HOH HOH . J 5 HOH A 75 675 195 HOH HOH . J 5 HOH A 76 676 518 HOH HOH . J 5 HOH A 77 677 198 HOH HOH . J 5 HOH A 78 678 14 HOH HOH . J 5 HOH A 79 679 41 HOH HOH . J 5 HOH A 80 680 594 HOH HOH . J 5 HOH A 81 681 320 HOH HOH . J 5 HOH A 82 682 644 HOH HOH . J 5 HOH A 83 683 340 HOH HOH . J 5 HOH A 84 684 164 HOH HOH . J 5 HOH A 85 685 208 HOH HOH . J 5 HOH A 86 686 563 HOH HOH . J 5 HOH A 87 687 189 HOH HOH . J 5 HOH A 88 688 515 HOH HOH . J 5 HOH A 89 689 166 HOH HOH . J 5 HOH A 90 690 667 HOH HOH . J 5 HOH A 91 691 197 HOH HOH . J 5 HOH A 92 692 50 HOH HOH . J 5 HOH A 93 693 193 HOH HOH . J 5 HOH A 94 694 165 HOH HOH . J 5 HOH A 95 695 163 HOH HOH . J 5 HOH A 96 696 350 HOH HOH . J 5 HOH A 97 697 184 HOH HOH . K 5 HOH B 1 601 31 HOH HOH . K 5 HOH B 2 602 508 HOH HOH . K 5 HOH B 3 603 597 HOH HOH . K 5 HOH B 4 604 117 HOH HOH . K 5 HOH B 5 605 7 HOH HOH . K 5 HOH B 6 606 159 HOH HOH . K 5 HOH B 7 607 574 HOH HOH . K 5 HOH B 8 608 266 HOH HOH . K 5 HOH B 9 609 441 HOH HOH . K 5 HOH B 10 610 345 HOH HOH . K 5 HOH B 11 611 126 HOH HOH . K 5 HOH B 12 612 407 HOH HOH . K 5 HOH B 13 613 265 HOH HOH . K 5 HOH B 14 614 271 HOH HOH . K 5 HOH B 15 615 395 HOH HOH . K 5 HOH B 16 616 130 HOH HOH . K 5 HOH B 17 617 114 HOH HOH . K 5 HOH B 18 618 668 HOH HOH . K 5 HOH B 19 619 393 HOH HOH . K 5 HOH B 20 620 391 HOH HOH . K 5 HOH B 21 621 129 HOH HOH . K 5 HOH B 22 622 138 HOH HOH . K 5 HOH B 23 623 18 HOH HOH . K 5 HOH B 24 624 643 HOH HOH . K 5 HOH B 25 625 651 HOH HOH . K 5 HOH B 26 626 474 HOH HOH . K 5 HOH B 27 627 258 HOH HOH . K 5 HOH B 28 628 461 HOH HOH . K 5 HOH B 29 629 390 HOH HOH . K 5 HOH B 30 630 123 HOH HOH . K 5 HOH B 31 631 113 HOH HOH . K 5 HOH B 32 632 181 HOH HOH . K 5 HOH B 33 633 564 HOH HOH . K 5 HOH B 34 634 88 HOH HOH . K 5 HOH B 35 635 401 HOH HOH . K 5 HOH B 36 636 87 HOH HOH . K 5 HOH B 37 637 423 HOH HOH . K 5 HOH B 38 638 5 HOH HOH . K 5 HOH B 39 639 157 HOH HOH . K 5 HOH B 40 640 120 HOH HOH . K 5 HOH B 41 641 127 HOH HOH . K 5 HOH B 42 642 336 HOH HOH . K 5 HOH B 43 643 6 HOH HOH . K 5 HOH B 44 644 334 HOH HOH . K 5 HOH B 45 645 541 HOH HOH . K 5 HOH B 46 646 69 HOH HOH . K 5 HOH B 47 647 27 HOH HOH . K 5 HOH B 48 648 109 HOH HOH . K 5 HOH B 49 649 132 HOH HOH . K 5 HOH B 50 650 442 HOH HOH . K 5 HOH B 51 651 172 HOH HOH . K 5 HOH B 52 652 270 HOH HOH . K 5 HOH B 53 653 409 HOH HOH . K 5 HOH B 54 654 124 HOH HOH . K 5 HOH B 55 655 449 HOH HOH . K 5 HOH B 56 656 406 HOH HOH . K 5 HOH B 57 657 74 HOH HOH . K 5 HOH B 58 658 182 HOH HOH . K 5 HOH B 59 659 482 HOH HOH . K 5 HOH B 60 660 128 HOH HOH . K 5 HOH B 61 661 85 HOH HOH . K 5 HOH B 62 662 96 HOH HOH . K 5 HOH B 63 663 535 HOH HOH . K 5 HOH B 64 664 555 HOH HOH . K 5 HOH B 65 665 111 HOH HOH . K 5 HOH B 66 666 440 HOH HOH . K 5 HOH B 67 667 659 HOH HOH . K 5 HOH B 68 668 387 HOH HOH . K 5 HOH B 69 669 426 HOH HOH . K 5 HOH B 70 670 131 HOH HOH . K 5 HOH B 71 671 24 HOH HOH . K 5 HOH B 72 672 356 HOH HOH . K 5 HOH B 73 673 118 HOH HOH . K 5 HOH B 74 674 273 HOH HOH . K 5 HOH B 75 675 264 HOH HOH . K 5 HOH B 76 676 285 HOH HOH . K 5 HOH B 77 677 253 HOH HOH . K 5 HOH B 78 678 418 HOH HOH . K 5 HOH B 79 679 148 HOH HOH . K 5 HOH B 80 680 280 HOH HOH . K 5 HOH B 81 681 517 HOH HOH . K 5 HOH B 82 682 143 HOH HOH . K 5 HOH B 83 683 452 HOH HOH . K 5 HOH B 84 684 25 HOH HOH . K 5 HOH B 85 685 284 HOH HOH . K 5 HOH B 86 686 288 HOH HOH . K 5 HOH B 87 687 108 HOH HOH . K 5 HOH B 88 688 83 HOH HOH . K 5 HOH B 89 689 578 HOH HOH . K 5 HOH B 90 690 89 HOH HOH . K 5 HOH B 91 691 402 HOH HOH . K 5 HOH B 92 692 546 HOH HOH . K 5 HOH B 93 693 141 HOH HOH . K 5 HOH B 94 694 550 HOH HOH . K 5 HOH B 95 695 91 HOH HOH . K 5 HOH B 96 696 561 HOH HOH . K 5 HOH B 97 697 500 HOH HOH . K 5 HOH B 98 698 421 HOH HOH . K 5 HOH B 99 699 28 HOH HOH . K 5 HOH B 100 700 489 HOH HOH . K 5 HOH B 101 701 403 HOH HOH . K 5 HOH B 102 702 443 HOH HOH . K 5 HOH B 103 703 373 HOH HOH . K 5 HOH B 104 704 422 HOH HOH . K 5 HOH B 105 705 256 HOH HOH . K 5 HOH B 106 706 585 HOH HOH . K 5 HOH B 107 707 142 HOH HOH . K 5 HOH B 108 708 566 HOH HOH . K 5 HOH B 109 709 272 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 3 -47.491 17.914 -26.718 1 71.04 ? S DMS 503 A 1 HETATM 2 O O DMS . . . E 3 -47.886 18.345 -28.099 1 75.79 ? O DMS 503 A 1 HETATM 3 C C1 DMS . . . E 3 -46.739 19.33 -25.966 1 65.24 ? C1 DMS 503 A 1 HETATM 4 C C2 DMS . . . E 3 -46.025 16.936 -26.915 1 67.82 ? C2 DMS 503 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 230 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #