data_7B64 # _model_server_result.job_id iqEQvrPgVmO6ed77iAZr4w _model_server_result.datetime_utc '2024-10-15 15:29:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b64 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7B64 # _exptl.entry_id 7B64 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 454.499 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (R)-6-((2-methyl-4-(1-methyl-1H-indole-5-carbonyl)piperazin-1-yl)sulfonyl)benzo[d]oxazol-2(3H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 148.548 _cell.angle_gamma 90 _cell.entry_id 7B64 _cell.length_a 115.538 _cell.length_b 34.624 _cell.length_c 75.17 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B64 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimer _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 51.412157 0 39.222509 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H22 N4 O5 S' _chem_comp.formula_weight 454.499 _chem_comp.id SYW _chem_comp.mon_nstd_flag . _chem_comp.name (R)-6-((2-methyl-4-(1-methyl-1H-indole-5-carbonyl)piperazin-1-yl)sulfonyl)benzo[d]oxazol-2(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 6-[(2~{R})-2-methyl-4-(1-methylindol-5-yl)carbonyl-piperazin-1-yl]sulfonyl-3~{H}-1,3-benzoxazol-2-one;TH7755 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 N27 SYW sing 290 n n C25 C24 SYW doub 291 n y C25 C26 SYW sing 292 n y C24 C23 SYW sing 293 n y N27 C26 SYW sing 294 n y N27 C29 SYW sing 295 n y C26 C31 SYW doub 296 n y C29 C30 SYW doub 297 n y C23 C21 SYW sing 298 n n C23 C32 SYW doub 299 n y O22 C21 SYW doub 300 n n C21 N04 SYW sing 301 n n C31 C32 SYW sing 302 n y C31 C30 SYW sing 303 n y N04 C03 SYW sing 304 n n N04 C05 SYW sing 305 n n C03 C02 SYW sing 306 n n C05 C06 SYW sing 307 n n C02 N07 SYW sing 308 n n C02 C01 SYW sing 309 n n C06 N07 SYW sing 310 n n N07 S08 SYW sing 311 n n O09 S08 SYW doub 312 n n S08 O10 SYW doub 313 n n S08 C11 SYW sing 314 n n C11 C12 SYW doub 315 n y C11 C20 SYW sing 316 n y C12 C13 SYW sing 317 n y C20 C19 SYW doub 318 n y C13 C14 SYW doub 319 n y C19 C14 SYW sing 320 n y C19 O18 SYW sing 321 n n C14 N15 SYW sing 322 n n O18 C16 SYW sing 323 n n N15 C16 SYW sing 324 n n C16 O17 SYW doub 325 n n C29 H1 SYW sing 326 n n C28 H2 SYW sing 327 n n C28 H3 SYW sing 328 n n C28 H4 SYW sing 329 n n C25 H5 SYW sing 330 n n C20 H6 SYW sing 331 n n C12 H7 SYW sing 332 n n C13 H8 SYW sing 333 n n C01 H9 SYW sing 334 n n C01 H10 SYW sing 335 n n C01 H11 SYW sing 336 n n C02 H12 SYW sing 337 n n C03 H13 SYW sing 338 n n C03 H14 SYW sing 339 n n C05 H15 SYW sing 340 n n C05 H16 SYW sing 341 n n C06 H17 SYW sing 342 n n C06 H18 SYW sing 343 n n N15 H19 SYW sing 344 n n C24 H20 SYW sing 345 n n C30 H21 SYW sing 346 n n C32 H22 SYW sing 347 n n # _atom_sites.entry_id 7B64 _atom_sites.fract_transf_matrix[1][1] 0.008655 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.014151 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028882 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SYW A 1 201 201 SYW T75 . C 3 HOH A 1 301 30 HOH HOH . C 3 HOH A 2 302 83 HOH HOH . C 3 HOH A 3 303 69 HOH HOH . C 3 HOH A 4 304 4 HOH HOH . C 3 HOH A 5 305 38 HOH HOH . C 3 HOH A 6 306 109 HOH HOH . C 3 HOH A 7 307 31 HOH HOH . C 3 HOH A 8 308 64 HOH HOH . C 3 HOH A 9 309 68 HOH HOH . C 3 HOH A 10 310 100 HOH HOH . C 3 HOH A 11 311 55 HOH HOH . C 3 HOH A 12 312 20 HOH HOH . C 3 HOH A 13 313 41 HOH HOH . C 3 HOH A 14 314 85 HOH HOH . C 3 HOH A 15 315 87 HOH HOH . C 3 HOH A 16 316 65 HOH HOH . C 3 HOH A 17 317 60 HOH HOH . C 3 HOH A 18 318 67 HOH HOH . C 3 HOH A 19 319 34 HOH HOH . C 3 HOH A 20 320 101 HOH HOH . C 3 HOH A 21 321 75 HOH HOH . C 3 HOH A 22 322 92 HOH HOH . C 3 HOH A 23 323 17 HOH HOH . C 3 HOH A 24 324 26 HOH HOH . C 3 HOH A 25 325 86 HOH HOH . C 3 HOH A 26 326 3 HOH HOH . C 3 HOH A 27 327 25 HOH HOH . C 3 HOH A 28 328 5 HOH HOH . C 3 HOH A 29 329 6 HOH HOH . C 3 HOH A 30 330 7 HOH HOH . C 3 HOH A 31 331 90 HOH HOH . C 3 HOH A 32 332 28 HOH HOH . C 3 HOH A 33 333 114 HOH HOH . C 3 HOH A 34 334 2 HOH HOH . C 3 HOH A 35 335 13 HOH HOH . C 3 HOH A 36 336 29 HOH HOH . C 3 HOH A 37 337 47 HOH HOH . C 3 HOH A 38 338 15 HOH HOH . C 3 HOH A 39 339 9 HOH HOH . C 3 HOH A 40 340 23 HOH HOH . C 3 HOH A 41 341 59 HOH HOH . C 3 HOH A 42 342 44 HOH HOH . C 3 HOH A 43 343 56 HOH HOH . C 3 HOH A 44 344 24 HOH HOH . C 3 HOH A 45 345 77 HOH HOH . C 3 HOH A 46 346 99 HOH HOH . C 3 HOH A 47 347 40 HOH HOH . C 3 HOH A 48 348 32 HOH HOH . C 3 HOH A 49 349 11 HOH HOH . C 3 HOH A 50 350 43 HOH HOH . C 3 HOH A 51 351 35 HOH HOH . C 3 HOH A 52 352 1 HOH HOH . C 3 HOH A 53 353 33 HOH HOH . C 3 HOH A 54 354 8 HOH HOH . C 3 HOH A 55 355 74 HOH HOH . C 3 HOH A 56 356 57 HOH HOH . C 3 HOH A 57 357 102 HOH HOH . C 3 HOH A 58 358 27 HOH HOH . C 3 HOH A 59 359 22 HOH HOH . C 3 HOH A 60 360 115 HOH HOH . C 3 HOH A 61 361 46 HOH HOH . C 3 HOH A 62 362 58 HOH HOH . C 3 HOH A 63 363 66 HOH HOH . C 3 HOH A 64 364 80 HOH HOH . C 3 HOH A 65 365 54 HOH HOH . C 3 HOH A 66 366 53 HOH HOH . C 3 HOH A 67 367 95 HOH HOH . C 3 HOH A 68 368 21 HOH HOH . C 3 HOH A 69 369 42 HOH HOH . C 3 HOH A 70 370 61 HOH HOH . C 3 HOH A 71 371 16 HOH HOH . C 3 HOH A 72 372 18 HOH HOH . C 3 HOH A 73 373 84 HOH HOH . C 3 HOH A 74 374 14 HOH HOH . C 3 HOH A 75 375 108 HOH HOH . C 3 HOH A 76 376 91 HOH HOH . C 3 HOH A 77 377 51 HOH HOH . C 3 HOH A 78 378 62 HOH HOH . C 3 HOH A 79 379 113 HOH HOH . C 3 HOH A 80 380 78 HOH HOH . C 3 HOH A 81 381 37 HOH HOH . C 3 HOH A 82 382 45 HOH HOH . C 3 HOH A 83 383 12 HOH HOH . C 3 HOH A 84 384 19 HOH HOH . C 3 HOH A 85 385 111 HOH HOH . C 3 HOH A 86 386 63 HOH HOH . C 3 HOH A 87 387 10 HOH HOH . C 3 HOH A 88 388 70 HOH HOH . C 3 HOH A 89 389 71 HOH HOH . C 3 HOH A 90 390 72 HOH HOH . C 3 HOH A 91 391 110 HOH HOH . C 3 HOH A 92 392 94 HOH HOH . C 3 HOH A 93 393 89 HOH HOH . C 3 HOH A 94 394 76 HOH HOH . C 3 HOH A 95 395 49 HOH HOH . C 3 HOH A 96 396 96 HOH HOH . C 3 HOH A 97 397 88 HOH HOH . C 3 HOH A 98 398 52 HOH HOH . C 3 HOH A 99 399 93 HOH HOH . C 3 HOH A 100 400 106 HOH HOH . C 3 HOH A 101 401 97 HOH HOH . C 3 HOH A 102 402 103 HOH HOH . C 3 HOH A 103 403 48 HOH HOH . C 3 HOH A 104 404 50 HOH HOH . C 3 HOH A 105 405 79 HOH HOH . C 3 HOH A 106 406 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C23 SYW . . . B 2 13.754 -21.712 22.521 1 40.2 ? C23 SYW 201 A 1 HETATM 2 C C29 SYW . . . B 2 13.562 -23.239 26.956 1 47.7 ? C29 SYW 201 A 1 HETATM 3 C C28 SYW . . . B 2 15.688 -24.509 26.698 1 50.04 ? C28 SYW 201 A 1 HETATM 4 C C26 SYW . . . B 2 14.498 -23.127 24.89 1 40.24 ? C26 SYW 201 A 1 HETATM 5 C C25 SYW . . . B 2 15.313 -23.199 23.776 1 39.75 ? C25 SYW 201 A 1 HETATM 6 C C11 SYW . . . B 2 14.532 -15.037 20.095 1 34.59 ? C11 SYW 201 A 1 HETATM 7 C C20 SYW . . . B 2 14.259 -14.743 21.459 1 33.64 ? C20 SYW 201 A 1 HETATM 8 C C21 SYW . . . B 2 13.439 -21.081 21.214 1 45.36 ? C21 SYW 201 A 1 HETATM 9 C C12 SYW . . . B 2 13.72 -14.376 19.15 1 33.39 ? C12 SYW 201 A 1 HETATM 10 C C16 SYW . . . B 2 11.698 -12.735 23.018 1 34.82 ? C16 SYW 201 A 1 HETATM 11 C C14 SYW . . . B 2 12.429 -13.276 20.837 1 33.89 ? C14 SYW 201 A 1 HETATM 12 C C13 SYW . . . B 2 12.652 -13.547 19.467 1 34.99 ? C13 SYW 201 A 1 HETATM 13 C C01 SYW . . . B 2 12.719 -17.789 20.018 1 44.92 ? C01 SYW 201 A 1 HETATM 14 C C02 SYW . . . B 2 13.987 -18.154 19.292 1 43.47 ? C02 SYW 201 A 1 HETATM 15 C C03 SYW . . . B 2 14.161 -19.651 19.184 1 41.47 ? C03 SYW 201 A 1 HETATM 16 N N04 SYW . . . B 2 14.396 -20.267 20.531 1 38.97 ? N04 SYW 201 A 1 HETATM 17 C C05 SYW . . . B 2 15.609 -19.795 21.144 1 39.14 ? C05 SYW 201 A 1 HETATM 18 C C06 SYW . . . B 2 15.467 -18.233 21.322 1 36.09 ? C06 SYW 201 A 1 HETATM 19 N N07 SYW . . . B 2 15.227 -17.587 20.016 1 37.29 ? N07 SYW 201 A 1 HETATM 20 S S08 SYW . . . B 2 15.73 -16.145 19.635 1 35.83 ? S08 SYW 201 A 1 HETATM 21 O O09 SYW . . . B 2 15.798 -16.192 18.157 1 36.48 ? O09 SYW 201 A 1 HETATM 22 O O10 SYW . . . B 2 16.98 -15.933 20.311 1 33.84 ? O10 SYW 201 A 1 HETATM 23 N N15 SYW . . . B 2 11.482 -12.575 21.552 1 34.59 ? N15 SYW 201 A 1 HETATM 24 O O17 SYW . . . B 2 11.128 -12.267 23.942 1 41.59 ? O17 SYW 201 A 1 HETATM 25 O O18 SYW . . . B 2 12.848 -13.588 23.078 1 34.03 ? O18 SYW 201 A 1 HETATM 26 C C19 SYW . . . B 2 13.231 -13.967 21.8 1 32.57 ? C19 SYW 201 A 1 HETATM 27 O O22 SYW . . . B 2 12.441 -21.347 20.592 1 50.52 ? O22 SYW 201 A 1 HETATM 28 C C24 SYW . . . B 2 14.949 -22.538 22.582 1 42.01 ? C24 SYW 201 A 1 HETATM 29 N N27 SYW . . . B 2 14.601 -23.68 26.22 1 45.64 ? N27 SYW 201 A 1 HETATM 30 C C30 SYW . . . B 2 12.726 -22.431 26.158 1 51.92 ? C30 SYW 201 A 1 HETATM 31 C C31 SYW . . . B 2 13.278 -22.312 24.847 1 45.36 ? C31 SYW 201 A 1 HETATM 32 C C32 SYW . . . B 2 12.94 -21.659 23.656 1 40.81 ? C32 SYW 201 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #