data_7B65 # _model_server_result.job_id hz1hgZXqAdpGX6YKCjAFNw _model_server_result.datetime_utc '2024-10-15 15:21:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b65 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7B65 # _exptl.entry_id 7B65 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 454.499 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (R)-6-((2-methyl-4-(1-methyl-1H-indole-5-carbonyl)piperazin-1-yl)sulfonyl)benzo[d]oxazol-2(3H)-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 91.582 _cell.angle_beta 106.74 _cell.angle_gamma 113.478 _cell.entry_id 7B65 _cell.length_a 34.91 _cell.length_b 43.803 _cell.length_c 60.457 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B65 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimer _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C22 H22 N4 O5 S' _chem_comp.formula_weight 454.499 _chem_comp.id SYW _chem_comp.mon_nstd_flag . _chem_comp.name (R)-6-((2-methyl-4-(1-methyl-1H-indole-5-carbonyl)piperazin-1-yl)sulfonyl)benzo[d]oxazol-2(3H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 6-[(2~{R})-2-methyl-4-(1-methylindol-5-yl)carbonyl-piperazin-1-yl]sulfonyl-3~{H}-1,3-benzoxazol-2-one;TH7755 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 N27 SYW sing 290 n n C25 C24 SYW doub 291 n y C25 C26 SYW sing 292 n y C24 C23 SYW sing 293 n y N27 C26 SYW sing 294 n y N27 C29 SYW sing 295 n y C26 C31 SYW doub 296 n y C29 C30 SYW doub 297 n y C23 C21 SYW sing 298 n n C23 C32 SYW doub 299 n y O22 C21 SYW doub 300 n n C21 N04 SYW sing 301 n n C31 C32 SYW sing 302 n y C31 C30 SYW sing 303 n y N04 C03 SYW sing 304 n n N04 C05 SYW sing 305 n n C03 C02 SYW sing 306 n n C05 C06 SYW sing 307 n n C02 N07 SYW sing 308 n n C02 C01 SYW sing 309 n n C06 N07 SYW sing 310 n n N07 S08 SYW sing 311 n n O09 S08 SYW doub 312 n n S08 O10 SYW doub 313 n n S08 C11 SYW sing 314 n n C11 C12 SYW doub 315 n y C11 C20 SYW sing 316 n y C12 C13 SYW sing 317 n y C20 C19 SYW doub 318 n y C13 C14 SYW doub 319 n y C19 C14 SYW sing 320 n y C19 O18 SYW sing 321 n n C14 N15 SYW sing 322 n n O18 C16 SYW sing 323 n n N15 C16 SYW sing 324 n n C16 O17 SYW doub 325 n n C29 H1 SYW sing 326 n n C28 H2 SYW sing 327 n n C28 H3 SYW sing 328 n n C28 H4 SYW sing 329 n n C25 H5 SYW sing 330 n n C20 H6 SYW sing 331 n n C12 H7 SYW sing 332 n n C13 H8 SYW sing 333 n n C01 H9 SYW sing 334 n n C01 H10 SYW sing 335 n n C01 H11 SYW sing 336 n n C02 H12 SYW sing 337 n n C03 H13 SYW sing 338 n n C03 H14 SYW sing 339 n n C05 H15 SYW sing 340 n n C05 H16 SYW sing 341 n n C06 H17 SYW sing 342 n n C06 H18 SYW sing 343 n n N15 H19 SYW sing 344 n n C24 H20 SYW sing 345 n n C30 H21 SYW sing 346 n n C32 H22 SYW sing 347 n n # _atom_sites.entry_id 7B65 _atom_sites.fract_transf_matrix[1][1] 0.028645 _atom_sites.fract_transf_matrix[1][2] 0.012442 _atom_sites.fract_transf_matrix[1][3] 0.010775 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02489 _atom_sites.fract_transf_matrix[2][3] 0.004088 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017504 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SYW A 1 201 201 SYW T75 . D 2 SYW B 1 201 201 SYW T75 . E 3 HOH A 1 301 31 HOH HOH . E 3 HOH A 2 302 258 HOH HOH . E 3 HOH A 3 303 50 HOH HOH . E 3 HOH A 4 304 123 HOH HOH . E 3 HOH A 5 305 244 HOH HOH . E 3 HOH A 6 306 88 HOH HOH . E 3 HOH A 7 307 193 HOH HOH . E 3 HOH A 8 308 55 HOH HOH . E 3 HOH A 9 309 162 HOH HOH . E 3 HOH A 10 310 282 HOH HOH . E 3 HOH A 11 311 138 HOH HOH . E 3 HOH A 12 312 99 HOH HOH . E 3 HOH A 13 313 90 HOH HOH . E 3 HOH A 14 314 79 HOH HOH . E 3 HOH A 15 315 20 HOH HOH . E 3 HOH A 16 316 245 HOH HOH . E 3 HOH A 17 317 189 HOH HOH . E 3 HOH A 18 318 130 HOH HOH . E 3 HOH A 19 319 268 HOH HOH . E 3 HOH A 20 320 163 HOH HOH . E 3 HOH A 21 321 164 HOH HOH . E 3 HOH A 22 322 221 HOH HOH . E 3 HOH A 23 323 133 HOH HOH . E 3 HOH A 24 324 114 HOH HOH . E 3 HOH A 25 325 35 HOH HOH . E 3 HOH A 26 326 14 HOH HOH . E 3 HOH A 27 327 8 HOH HOH . E 3 HOH A 28 328 10 HOH HOH . E 3 HOH A 29 329 104 HOH HOH . E 3 HOH A 30 330 30 HOH HOH . E 3 HOH A 31 331 2 HOH HOH . E 3 HOH A 32 332 220 HOH HOH . E 3 HOH A 33 333 264 HOH HOH . E 3 HOH A 34 334 53 HOH HOH . E 3 HOH A 35 335 21 HOH HOH . E 3 HOH A 36 336 101 HOH HOH . E 3 HOH A 37 337 18 HOH HOH . E 3 HOH A 38 338 44 HOH HOH . E 3 HOH A 39 339 57 HOH HOH . E 3 HOH A 40 340 40 HOH HOH . E 3 HOH A 41 341 232 HOH HOH . E 3 HOH A 42 342 17 HOH HOH . E 3 HOH A 43 343 76 HOH HOH . E 3 HOH A 44 344 95 HOH HOH . E 3 HOH A 45 345 1 HOH HOH . E 3 HOH A 46 346 6 HOH HOH . E 3 HOH A 47 347 237 HOH HOH . E 3 HOH A 48 348 65 HOH HOH . E 3 HOH A 49 349 300 HOH HOH . E 3 HOH A 50 350 49 HOH HOH . E 3 HOH A 51 351 13 HOH HOH . E 3 HOH A 52 352 32 HOH HOH . E 3 HOH A 53 353 305 HOH HOH . E 3 HOH A 54 354 81 HOH HOH . E 3 HOH A 55 355 128 HOH HOH . E 3 HOH A 56 356 127 HOH HOH . E 3 HOH A 57 357 38 HOH HOH . E 3 HOH A 58 358 74 HOH HOH . E 3 HOH A 59 359 27 HOH HOH . E 3 HOH A 60 360 34 HOH HOH . E 3 HOH A 61 361 142 HOH HOH . E 3 HOH A 62 362 111 HOH HOH . E 3 HOH A 63 363 121 HOH HOH . E 3 HOH A 64 364 194 HOH HOH . E 3 HOH A 65 365 201 HOH HOH . E 3 HOH A 66 366 135 HOH HOH . E 3 HOH A 67 367 52 HOH HOH . E 3 HOH A 68 368 198 HOH HOH . E 3 HOH A 69 369 113 HOH HOH . E 3 HOH A 70 370 170 HOH HOH . E 3 HOH A 71 371 78 HOH HOH . E 3 HOH A 72 372 64 HOH HOH . E 3 HOH A 73 373 97 HOH HOH . E 3 HOH A 74 374 71 HOH HOH . E 3 HOH A 75 375 87 HOH HOH . E 3 HOH A 76 376 260 HOH HOH . E 3 HOH A 77 377 118 HOH HOH . E 3 HOH A 78 378 39 HOH HOH . E 3 HOH A 79 379 259 HOH HOH . E 3 HOH A 80 380 80 HOH HOH . E 3 HOH A 81 381 100 HOH HOH . E 3 HOH A 82 382 303 HOH HOH . E 3 HOH A 83 383 47 HOH HOH . E 3 HOH A 84 384 23 HOH HOH . E 3 HOH A 85 385 172 HOH HOH . E 3 HOH A 86 386 62 HOH HOH . E 3 HOH A 87 387 73 HOH HOH . E 3 HOH A 88 388 195 HOH HOH . E 3 HOH A 89 389 112 HOH HOH . E 3 HOH A 90 390 180 HOH HOH . E 3 HOH A 91 391 152 HOH HOH . E 3 HOH A 92 392 202 HOH HOH . E 3 HOH A 93 393 149 HOH HOH . E 3 HOH A 94 394 178 HOH HOH . E 3 HOH A 95 395 270 HOH HOH . E 3 HOH A 96 396 173 HOH HOH . E 3 HOH A 97 397 299 HOH HOH . E 3 HOH A 98 398 54 HOH HOH . E 3 HOH A 99 399 106 HOH HOH . E 3 HOH A 100 400 295 HOH HOH . E 3 HOH A 101 401 155 HOH HOH . E 3 HOH A 102 402 223 HOH HOH . E 3 HOH A 103 403 109 HOH HOH . E 3 HOH A 104 404 199 HOH HOH . E 3 HOH A 105 405 122 HOH HOH . E 3 HOH A 106 406 145 HOH HOH . F 3 HOH B 1 301 46 HOH HOH . F 3 HOH B 2 302 98 HOH HOH . F 3 HOH B 3 303 89 HOH HOH . F 3 HOH B 4 304 59 HOH HOH . F 3 HOH B 5 305 231 HOH HOH . F 3 HOH B 6 306 158 HOH HOH . F 3 HOH B 7 307 160 HOH HOH . F 3 HOH B 8 308 218 HOH HOH . F 3 HOH B 9 309 68 HOH HOH . F 3 HOH B 10 310 243 HOH HOH . F 3 HOH B 11 311 288 HOH HOH . F 3 HOH B 12 312 217 HOH HOH . F 3 HOH B 13 313 93 HOH HOH . F 3 HOH B 14 314 306 HOH HOH . F 3 HOH B 15 315 126 HOH HOH . F 3 HOH B 16 316 137 HOH HOH . F 3 HOH B 17 317 22 HOH HOH . F 3 HOH B 18 318 94 HOH HOH . F 3 HOH B 19 319 70 HOH HOH . F 3 HOH B 20 320 190 HOH HOH . F 3 HOH B 21 321 28 HOH HOH . F 3 HOH B 22 322 200 HOH HOH . F 3 HOH B 23 323 16 HOH HOH . F 3 HOH B 24 324 261 HOH HOH . F 3 HOH B 25 325 12 HOH HOH . F 3 HOH B 26 326 105 HOH HOH . F 3 HOH B 27 327 205 HOH HOH . F 3 HOH B 28 328 9 HOH HOH . F 3 HOH B 29 329 96 HOH HOH . F 3 HOH B 30 330 206 HOH HOH . F 3 HOH B 31 331 25 HOH HOH . F 3 HOH B 32 332 43 HOH HOH . F 3 HOH B 33 333 242 HOH HOH . F 3 HOH B 34 334 4 HOH HOH . F 3 HOH B 35 335 284 HOH HOH . F 3 HOH B 36 336 26 HOH HOH . F 3 HOH B 37 337 11 HOH HOH . F 3 HOH B 38 338 19 HOH HOH . F 3 HOH B 39 339 161 HOH HOH . F 3 HOH B 40 340 67 HOH HOH . F 3 HOH B 41 341 131 HOH HOH . F 3 HOH B 42 342 302 HOH HOH . F 3 HOH B 43 343 42 HOH HOH . F 3 HOH B 44 344 7 HOH HOH . F 3 HOH B 45 345 124 HOH HOH . F 3 HOH B 46 346 108 HOH HOH . F 3 HOH B 47 347 77 HOH HOH . F 3 HOH B 48 348 60 HOH HOH . F 3 HOH B 49 349 3 HOH HOH . F 3 HOH B 50 350 129 HOH HOH . F 3 HOH B 51 351 48 HOH HOH . F 3 HOH B 52 352 125 HOH HOH . F 3 HOH B 53 353 5 HOH HOH . F 3 HOH B 54 354 63 HOH HOH . F 3 HOH B 55 355 196 HOH HOH . F 3 HOH B 56 356 15 HOH HOH . F 3 HOH B 57 357 285 HOH HOH . F 3 HOH B 58 358 69 HOH HOH . F 3 HOH B 59 359 56 HOH HOH . F 3 HOH B 60 360 103 HOH HOH . F 3 HOH B 61 361 278 HOH HOH . F 3 HOH B 62 362 33 HOH HOH . F 3 HOH B 63 363 75 HOH HOH . F 3 HOH B 64 364 132 HOH HOH . F 3 HOH B 65 365 304 HOH HOH . F 3 HOH B 66 366 119 HOH HOH . F 3 HOH B 67 367 116 HOH HOH . F 3 HOH B 68 368 92 HOH HOH . F 3 HOH B 69 369 37 HOH HOH . F 3 HOH B 70 370 72 HOH HOH . F 3 HOH B 71 371 41 HOH HOH . F 3 HOH B 72 372 86 HOH HOH . F 3 HOH B 73 373 51 HOH HOH . F 3 HOH B 74 374 267 HOH HOH . F 3 HOH B 75 375 144 HOH HOH . F 3 HOH B 76 376 286 HOH HOH . F 3 HOH B 77 377 45 HOH HOH . F 3 HOH B 78 378 85 HOH HOH . F 3 HOH B 79 379 24 HOH HOH . F 3 HOH B 80 380 157 HOH HOH . F 3 HOH B 81 381 91 HOH HOH . F 3 HOH B 82 382 146 HOH HOH . F 3 HOH B 83 383 36 HOH HOH . F 3 HOH B 84 384 301 HOH HOH . F 3 HOH B 85 385 84 HOH HOH . F 3 HOH B 86 386 58 HOH HOH . F 3 HOH B 87 387 117 HOH HOH . F 3 HOH B 88 388 66 HOH HOH . F 3 HOH B 89 389 83 HOH HOH . F 3 HOH B 90 390 148 HOH HOH . F 3 HOH B 91 391 110 HOH HOH . F 3 HOH B 92 392 115 HOH HOH . F 3 HOH B 93 393 139 HOH HOH . F 3 HOH B 94 394 151 HOH HOH . F 3 HOH B 95 395 187 HOH HOH . F 3 HOH B 96 396 274 HOH HOH . F 3 HOH B 97 397 61 HOH HOH . F 3 HOH B 98 398 213 HOH HOH . F 3 HOH B 99 399 291 HOH HOH . F 3 HOH B 100 400 185 HOH HOH . F 3 HOH B 101 401 153 HOH HOH . F 3 HOH B 102 402 175 HOH HOH . F 3 HOH B 103 403 215 HOH HOH . F 3 HOH B 104 404 192 HOH HOH . F 3 HOH B 105 405 159 HOH HOH . F 3 HOH B 106 406 251 HOH HOH . F 3 HOH B 107 407 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C23 SYW . . . D 2 -24.434 12.972 32.108 1 27.67 ? C23 SYW 201 B 1 HETATM 2 C C29 SYW . . . D 2 -25.982 8.644 31.559 1 35.37 ? C29 SYW 201 B 1 HETATM 3 C C28 SYW . . . D 2 -27.288 9.298 29.455 1 32.54 ? C28 SYW 201 B 1 HETATM 4 C C26 SYW . . . D 2 -25.857 10.82 30.96 1 29.8 ? C26 SYW 201 B 1 HETATM 5 C C25 SYW . . . D 2 -25.947 12.042 30.349 1 30.04 ? C25 SYW 201 B 1 HETATM 6 C C11 SYW . . . D 2 -17.744 15.449 31.693 1 17.73 ? C11 SYW 201 B 1 HETATM 7 C C20 SYW . . . D 2 -17.483 14.083 31.723 1 16.77 ? C20 SYW 201 B 1 HETATM 8 C C21 SYW . . . D 2 -23.789 14.172 32.634 1 29.68 ? C21 SYW 201 B 1 HETATM 9 C C12 SYW . . . D 2 -17.161 16.276 32.68 1 16.04 ? C12 SYW 201 B 1 HETATM 10 C C16 SYW . . . D 2 -15.468 12.187 34.089 1 18.03 ? C16 SYW 201 B 1 HETATM 11 C C14 SYW . . . D 2 -16.044 14.404 33.686 1 16.93 ? C14 SYW 201 B 1 HETATM 12 C C13 SYW . . . D 2 -16.356 15.768 33.733 1 16.63 ? C13 SYW 201 B 1 HETATM 13 C C01 SYW . . . D 2 -20.498 15.104 33.558 1 24.83 ? C01 SYW 201 B 1 HETATM 14 C C02 SYW . . . D 2 -20.859 16.055 32.472 1 21.23 ? C02 SYW 201 B 1 HETATM 15 C C03 SYW . . . D 2 -22.384 16.17 32.257 1 22.11 ? C03 SYW 201 B 1 HETATM 16 N N04 SYW . . . D 2 -22.994 14.969 31.788 1 23.19 ? N04 SYW 201 B 1 HETATM 17 C C05 SYW . . . D 2 -22.569 14.495 30.452 1 21.43 ? C05 SYW 201 B 1 HETATM 18 C C06 SYW . . . D 2 -20.953 14.366 30.613 1 18.64 ? C06 SYW 201 B 1 HETATM 19 N N07 SYW . . . D 2 -20.348 15.621 31.098 1 19.12 ? N07 SYW 201 B 1 HETATM 20 S S08 SYW . . . D 2 -18.851 16.112 30.636 1 18.6 ? S08 SYW 201 B 1 HETATM 21 O O09 SYW . . . D 2 -18.826 17.56 30.847 1 18.49 ? O09 SYW 201 B 1 HETATM 22 O O10 SYW . . . D 2 -18.687 15.608 29.276 1 17.26 ? O10 SYW 201 B 1 HETATM 23 N N15 SYW . . . D 2 -15.363 13.584 34.55 1 17.36 ? N15 SYW 201 B 1 HETATM 24 O O17 SYW . . . D 2 -14.987 11.208 34.555 1 22.66 ? O17 SYW 201 B 1 HETATM 25 O O18 SYW . . . D 2 -16.278 12.272 32.89 1 17.24 ? O18 SYW 201 B 1 HETATM 26 C C19 SYW . . . D 2 -16.692 13.558 32.712 1 16.96 ? C19 SYW 201 B 1 HETATM 27 O O22 SYW . . . D 2 -24.014 14.643 33.726 1 34.38 ? O22 SYW 201 B 1 HETATM 28 C C24 SYW . . . D 2 -25.254 13.15 30.917 1 29.48 ? C24 SYW 201 B 1 HETATM 29 N N27 SYW . . . D 2 -26.413 9.543 30.638 1 32.36 ? N27 SYW 201 B 1 HETATM 30 C C30 SYW . . . D 2 -25.164 9.269 32.513 1 34.37 ? C30 SYW 201 B 1 HETATM 31 C C31 SYW . . . D 2 -25.047 10.63 32.204 1 30.06 ? C31 SYW 201 B 1 HETATM 32 C C32 SYW . . . D 2 -24.372 11.736 32.725 1 28.68 ? C32 SYW 201 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #