data_7B6J # _model_server_result.job_id mZvBoPV6YWMWJrJHt2L4-A _model_server_result.datetime_utc '2024-11-23 00:46:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 7B6J # _exptl.entry_id 7B6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 96.824 _cell.angle_beta 91.36 _cell.angle_gamma 104.993 _cell.entry_id 7B6J _cell.length_a 58.258 _cell.length_b 58.291 _cell.length_c 74.633 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id 'PISA and gel filtration' monomer 1 author_and_software_defined_assembly 1 'PISA and gel filtration' monomer 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7B6J _atom_sites.fract_transf_matrix[1][1] 0.017165 _atom_sites.fract_transf_matrix[1][2] 0.004597 _atom_sites.fract_transf_matrix[1][3] 0.001011 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01776 _atom_sites.fract_transf_matrix[2][3] 0.002318 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013516 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 501 497 EDO EDO . D 3 SZB A 1 502 701 SZB LIG . E 3 SZB A 1 503 702 SZB LIG . F 4 IPA A 1 504 703 IPA IPA . G 2 EDO B 1 501 496 EDO EDO . H 3 SZB B 1 502 701 SZB LIG . I 4 IPA B 1 503 703 IPA IPA . J 5 HOH A 1 601 574 HOH HOH . J 5 HOH A 2 602 607 HOH HOH . J 5 HOH A 3 603 600 HOH HOH . J 5 HOH A 4 604 687 HOH HOH . J 5 HOH A 5 605 596 HOH HOH . J 5 HOH A 6 606 625 HOH HOH . J 5 HOH A 7 607 547 HOH HOH . J 5 HOH A 8 608 681 HOH HOH . J 5 HOH A 9 609 553 HOH HOH . J 5 HOH A 10 610 526 HOH HOH . J 5 HOH A 11 611 585 HOH HOH . J 5 HOH A 12 612 622 HOH HOH . J 5 HOH A 13 613 586 HOH HOH . J 5 HOH A 14 614 540 HOH HOH . J 5 HOH A 15 615 649 HOH HOH . J 5 HOH A 16 616 630 HOH HOH . J 5 HOH A 17 617 519 HOH HOH . J 5 HOH A 18 618 555 HOH HOH . J 5 HOH A 19 619 593 HOH HOH . J 5 HOH A 20 620 592 HOH HOH . J 5 HOH A 21 621 516 HOH HOH . J 5 HOH A 22 622 570 HOH HOH . J 5 HOH A 23 623 529 HOH HOH . J 5 HOH A 24 624 584 HOH HOH . J 5 HOH A 25 625 675 HOH HOH . J 5 HOH A 26 626 541 HOH HOH . J 5 HOH A 27 627 507 HOH HOH . J 5 HOH A 28 628 582 HOH HOH . J 5 HOH A 29 629 511 HOH HOH . J 5 HOH A 30 630 606 HOH HOH . J 5 HOH A 31 631 514 HOH HOH . J 5 HOH A 32 632 638 HOH HOH . J 5 HOH A 33 633 528 HOH HOH . J 5 HOH A 34 634 598 HOH HOH . J 5 HOH A 35 635 611 HOH HOH . J 5 HOH A 36 636 542 HOH HOH . J 5 HOH A 37 637 617 HOH HOH . J 5 HOH A 38 638 506 HOH HOH . J 5 HOH A 39 639 579 HOH HOH . J 5 HOH A 40 640 673 HOH HOH . J 5 HOH A 41 641 666 HOH HOH . J 5 HOH A 42 642 509 HOH HOH . J 5 HOH A 43 643 505 HOH HOH . J 5 HOH A 44 644 517 HOH HOH . J 5 HOH A 45 645 530 HOH HOH . J 5 HOH A 46 646 628 HOH HOH . J 5 HOH A 47 647 558 HOH HOH . J 5 HOH A 48 648 536 HOH HOH . J 5 HOH A 49 649 508 HOH HOH . J 5 HOH A 50 650 559 HOH HOH . J 5 HOH A 51 651 571 HOH HOH . J 5 HOH A 52 652 575 HOH HOH . J 5 HOH A 53 653 532 HOH HOH . J 5 HOH A 54 654 525 HOH HOH . J 5 HOH A 55 655 510 HOH HOH . J 5 HOH A 56 656 500 HOH HOH . J 5 HOH A 57 657 498 HOH HOH . J 5 HOH A 58 658 523 HOH HOH . J 5 HOH A 59 659 590 HOH HOH . J 5 HOH A 60 660 572 HOH HOH . J 5 HOH A 61 661 634 HOH HOH . J 5 HOH A 62 662 563 HOH HOH . J 5 HOH A 63 663 503 HOH HOH . J 5 HOH A 64 664 619 HOH HOH . J 5 HOH A 65 665 661 HOH HOH . J 5 HOH A 66 666 520 HOH HOH . J 5 HOH A 67 667 554 HOH HOH . J 5 HOH A 68 668 605 HOH HOH . J 5 HOH A 69 669 587 HOH HOH . J 5 HOH A 70 670 539 HOH HOH . J 5 HOH A 71 671 604 HOH HOH . J 5 HOH A 72 672 502 HOH HOH . J 5 HOH A 73 673 648 HOH HOH . J 5 HOH A 74 674 537 HOH HOH . J 5 HOH A 75 675 650 HOH HOH . J 5 HOH A 76 676 627 HOH HOH . J 5 HOH A 77 677 589 HOH HOH . J 5 HOH A 78 678 639 HOH HOH . J 5 HOH A 79 679 566 HOH HOH . J 5 HOH A 80 680 499 HOH HOH . J 5 HOH A 81 681 552 HOH HOH . J 5 HOH A 82 682 549 HOH HOH . J 5 HOH A 83 683 581 HOH HOH . J 5 HOH A 84 684 501 HOH HOH . J 5 HOH A 85 685 504 HOH HOH . J 5 HOH A 86 686 533 HOH HOH . J 5 HOH A 87 687 522 HOH HOH . J 5 HOH A 88 688 637 HOH HOH . J 5 HOH A 89 689 591 HOH HOH . J 5 HOH A 90 690 2 HOH HOH . J 5 HOH A 91 691 531 HOH HOH . J 5 HOH A 92 692 513 HOH HOH . J 5 HOH A 93 693 518 HOH HOH . J 5 HOH A 94 694 614 HOH HOH . J 5 HOH A 95 695 556 HOH HOH . J 5 HOH A 96 696 534 HOH HOH . J 5 HOH A 97 697 515 HOH HOH . J 5 HOH A 98 698 527 HOH HOH . J 5 HOH A 99 699 669 HOH HOH . J 5 HOH A 100 700 599 HOH HOH . J 5 HOH A 101 701 657 HOH HOH . J 5 HOH A 102 702 545 HOH HOH . J 5 HOH A 103 703 578 HOH HOH . J 5 HOH A 104 704 620 HOH HOH . J 5 HOH A 105 705 560 HOH HOH . J 5 HOH A 106 706 609 HOH HOH . J 5 HOH A 107 707 544 HOH HOH . J 5 HOH A 108 708 551 HOH HOH . J 5 HOH A 109 709 595 HOH HOH . J 5 HOH A 110 710 538 HOH HOH . J 5 HOH A 111 711 646 HOH HOH . J 5 HOH A 112 712 543 HOH HOH . J 5 HOH A 113 713 546 HOH HOH . J 5 HOH A 114 714 561 HOH HOH . J 5 HOH A 115 715 583 HOH HOH . J 5 HOH A 116 716 674 HOH HOH . J 5 HOH A 117 717 524 HOH HOH . J 5 HOH A 118 718 659 HOH HOH . J 5 HOH A 119 719 562 HOH HOH . J 5 HOH A 120 720 588 HOH HOH . J 5 HOH A 121 721 601 HOH HOH . J 5 HOH A 122 722 512 HOH HOH . J 5 HOH A 123 723 615 HOH HOH . J 5 HOH A 124 724 667 HOH HOH . J 5 HOH A 125 725 618 HOH HOH . J 5 HOH A 126 726 565 HOH HOH . J 5 HOH A 127 727 682 HOH HOH . J 5 HOH A 128 728 608 HOH HOH . J 5 HOH A 129 729 603 HOH HOH . J 5 HOH A 130 730 610 HOH HOH . J 5 HOH A 131 731 602 HOH HOH . J 5 HOH A 132 732 653 HOH HOH . J 5 HOH A 133 733 678 HOH HOH . J 5 HOH A 134 734 564 HOH HOH . J 5 HOH A 135 735 4 HOH HOH . J 5 HOH A 136 736 6 HOH HOH . J 5 HOH A 137 737 651 HOH HOH . J 5 HOH A 138 738 624 HOH HOH . J 5 HOH A 139 739 676 HOH HOH . J 5 HOH A 140 740 685 HOH HOH . J 5 HOH A 141 741 662 HOH HOH . J 5 HOH A 142 742 679 HOH HOH . J 5 HOH A 143 743 568 HOH HOH . J 5 HOH A 144 744 640 HOH HOH . J 5 HOH A 145 745 663 HOH HOH . J 5 HOH A 146 746 686 HOH HOH . J 5 HOH A 147 747 653 HOH HOH . J 5 HOH A 148 748 680 HOH HOH . J 5 HOH A 149 749 677 HOH HOH . J 5 HOH A 150 750 616 HOH HOH . J 5 HOH A 151 751 557 HOH HOH . J 5 HOH A 152 752 573 HOH HOH . J 5 HOH A 153 753 569 HOH HOH . J 5 HOH A 154 754 577 HOH HOH . K 5 HOH B 1 601 684 HOH HOH . K 5 HOH B 2 602 601 HOH HOH . K 5 HOH B 3 603 630 HOH HOH . K 5 HOH B 4 604 528 HOH HOH . K 5 HOH B 5 605 533 HOH HOH . K 5 HOH B 6 606 628 HOH HOH . K 5 HOH B 7 607 641 HOH HOH . K 5 HOH B 8 608 670 HOH HOH . K 5 HOH B 9 609 543 HOH HOH . K 5 HOH B 10 610 575 HOH HOH . K 5 HOH B 11 611 583 HOH HOH . K 5 HOH B 12 612 561 HOH HOH . K 5 HOH B 13 613 553 HOH HOH . K 5 HOH B 14 614 655 HOH HOH . K 5 HOH B 15 615 612 HOH HOH . K 5 HOH B 16 616 536 HOH HOH . K 5 HOH B 17 617 672 HOH HOH . K 5 HOH B 18 618 594 HOH HOH . K 5 HOH B 19 619 593 HOH HOH . K 5 HOH B 20 620 524 HOH HOH . K 5 HOH B 21 621 522 HOH HOH . K 5 HOH B 22 622 565 HOH HOH . K 5 HOH B 23 623 592 HOH HOH . K 5 HOH B 24 624 589 HOH HOH . K 5 HOH B 25 625 502 HOH HOH . K 5 HOH B 26 626 542 HOH HOH . K 5 HOH B 27 627 619 HOH HOH . K 5 HOH B 28 628 595 HOH HOH . K 5 HOH B 29 629 556 HOH HOH . K 5 HOH B 30 630 548 HOH HOH . K 5 HOH B 31 631 557 HOH HOH . K 5 HOH B 32 632 508 HOH HOH . K 5 HOH B 33 633 519 HOH HOH . K 5 HOH B 34 634 639 HOH HOH . K 5 HOH B 35 635 549 HOH HOH . K 5 HOH B 36 636 514 HOH HOH . K 5 HOH B 37 637 513 HOH HOH . K 5 HOH B 38 638 507 HOH HOH . K 5 HOH B 39 639 510 HOH HOH . K 5 HOH B 40 640 498 HOH HOH . K 5 HOH B 41 641 503 HOH HOH . K 5 HOH B 42 642 590 HOH HOH . K 5 HOH B 43 643 529 HOH HOH . K 5 HOH B 44 644 582 HOH HOH . K 5 HOH B 45 645 558 HOH HOH . K 5 HOH B 46 646 573 HOH HOH . K 5 HOH B 47 647 532 HOH HOH . K 5 HOH B 48 648 660 HOH HOH . K 5 HOH B 49 649 499 HOH HOH . K 5 HOH B 50 650 527 HOH HOH . K 5 HOH B 51 651 546 HOH HOH . K 5 HOH B 52 652 559 HOH HOH . K 5 HOH B 53 653 550 HOH HOH . K 5 HOH B 54 654 541 HOH HOH . K 5 HOH B 55 655 501 HOH HOH . K 5 HOH B 56 656 618 HOH HOH . K 5 HOH B 57 657 564 HOH HOH . K 5 HOH B 58 658 517 HOH HOH . K 5 HOH B 59 659 530 HOH HOH . K 5 HOH B 60 660 511 HOH HOH . K 5 HOH B 61 661 535 HOH HOH . K 5 HOH B 62 662 649 HOH HOH . K 5 HOH B 63 663 520 HOH HOH . K 5 HOH B 64 664 641 HOH HOH . K 5 HOH B 65 665 506 HOH HOH . K 5 HOH B 66 666 538 HOH HOH . K 5 HOH B 67 667 659 HOH HOH . K 5 HOH B 68 668 585 HOH HOH . K 5 HOH B 69 669 580 HOH HOH . K 5 HOH B 70 670 545 HOH HOH . K 5 HOH B 71 671 631 HOH HOH . K 5 HOH B 72 672 567 HOH HOH . K 5 HOH B 73 673 586 HOH HOH . K 5 HOH B 74 674 566 HOH HOH . K 5 HOH B 75 675 554 HOH HOH . K 5 HOH B 76 676 651 HOH HOH . K 5 HOH B 77 677 516 HOH HOH . K 5 HOH B 78 678 515 HOH HOH . K 5 HOH B 79 679 604 HOH HOH . K 5 HOH B 80 680 505 HOH HOH . K 5 HOH B 81 681 588 HOH HOH . K 5 HOH B 82 682 555 HOH HOH . K 5 HOH B 83 683 624 HOH HOH . K 5 HOH B 84 684 512 HOH HOH . K 5 HOH B 85 685 616 HOH HOH . K 5 HOH B 86 686 642 HOH HOH . K 5 HOH B 87 687 629 HOH HOH . K 5 HOH B 88 688 526 HOH HOH . K 5 HOH B 89 689 578 HOH HOH . K 5 HOH B 90 690 625 HOH HOH . K 5 HOH B 91 691 675 HOH HOH . K 5 HOH B 92 692 500 HOH HOH . K 5 HOH B 93 693 509 HOH HOH . K 5 HOH B 94 694 547 HOH HOH . K 5 HOH B 95 695 551 HOH HOH . K 5 HOH B 96 696 539 HOH HOH . K 5 HOH B 97 697 598 HOH HOH . K 5 HOH B 98 698 5 HOH HOH . K 5 HOH B 99 699 614 HOH HOH . K 5 HOH B 100 700 569 HOH HOH . K 5 HOH B 101 701 605 HOH HOH . K 5 HOH B 102 702 581 HOH HOH . K 5 HOH B 103 703 540 HOH HOH . K 5 HOH B 104 704 597 HOH HOH . K 5 HOH B 105 705 591 HOH HOH . K 5 HOH B 106 706 504 HOH HOH . K 5 HOH B 107 707 523 HOH HOH . K 5 HOH B 108 708 666 HOH HOH . K 5 HOH B 109 709 544 HOH HOH . K 5 HOH B 110 710 663 HOH HOH . K 5 HOH B 111 711 571 HOH HOH . K 5 HOH B 112 712 560 HOH HOH . K 5 HOH B 113 713 568 HOH HOH . K 5 HOH B 114 714 611 HOH HOH . K 5 HOH B 115 715 518 HOH HOH . K 5 HOH B 116 716 576 HOH HOH . K 5 HOH B 117 717 617 HOH HOH . K 5 HOH B 118 718 534 HOH HOH . K 5 HOH B 119 719 615 HOH HOH . K 5 HOH B 120 720 658 HOH HOH . K 5 HOH B 121 721 579 HOH HOH . K 5 HOH B 122 722 688 HOH HOH . K 5 HOH B 123 723 660 HOH HOH . K 5 HOH B 124 724 620 HOH HOH . K 5 HOH B 125 725 668 HOH HOH . K 5 HOH B 126 726 610 HOH HOH . K 5 HOH B 127 727 3 HOH HOH . K 5 HOH B 128 728 622 HOH HOH . K 5 HOH B 129 729 552 HOH HOH . K 5 HOH B 130 730 683 HOH HOH . K 5 HOH B 131 731 531 HOH HOH . K 5 HOH B 132 732 608 HOH HOH . K 5 HOH B 133 733 621 HOH HOH . K 5 HOH B 134 734 537 HOH HOH . K 5 HOH B 135 735 572 HOH HOH . K 5 HOH B 136 736 563 HOH HOH . K 5 HOH B 137 737 525 HOH HOH . K 5 HOH B 138 738 621 HOH HOH . K 5 HOH B 139 739 633 HOH HOH . K 5 HOH B 140 740 673 HOH HOH . K 5 HOH B 141 741 521 HOH HOH . K 5 HOH B 142 742 648 HOH HOH . K 5 HOH B 143 743 632 HOH HOH . K 5 HOH B 144 744 626 HOH HOH . K 5 HOH B 145 745 600 HOH HOH . K 5 HOH B 146 746 627 HOH HOH . K 5 HOH B 147 747 661 HOH HOH . K 5 HOH B 148 748 603 HOH HOH . K 5 HOH B 149 749 677 HOH HOH . K 5 HOH B 150 750 690 HOH HOH . K 5 HOH B 151 751 596 HOH HOH . K 5 HOH B 152 752 643 HOH HOH . K 5 HOH B 153 753 577 HOH HOH . K 5 HOH B 154 754 678 HOH HOH . K 5 HOH B 155 755 584 HOH HOH . K 5 HOH B 156 756 650 HOH HOH . K 5 HOH B 157 757 562 HOH HOH . K 5 HOH B 158 758 679 HOH HOH . K 5 HOH B 159 759 654 HOH HOH . K 5 HOH B 160 760 647 HOH HOH . K 5 HOH B 161 761 640 HOH HOH . K 5 HOH B 162 762 607 HOH HOH . K 5 HOH B 163 763 606 HOH HOH . K 5 HOH B 164 764 645 HOH HOH . K 5 HOH B 165 765 638 HOH HOH . K 5 HOH B 166 766 587 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -47.195 17.235 -26.869 1 52.16 0 C1 EDO 501 A 1 HETATM 2 O O1 EDO . . . C 2 -45.929 16.684 -26.587 1 61.23 0 O1 EDO 501 A 1 HETATM 3 C C2 EDO . . . C 2 -47.078 18.671 -27.091 1 54.58 0 C2 EDO 501 A 1 HETATM 4 O O2 EDO . . . C 2 -47.773 19.445 -26.15 1 56.07 0 O2 EDO 501 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #