data_7B7H
#
_model_server_result.job_id            2B3xwbRR9rrEEOJnTigtoQ 
_model_server_result.datetime_utc      '2024-11-13 10:02:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7b7h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":516}' 
#
_entry.id    7B7H 
#
_exptl.entry_id    7B7H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         61.947 
_cell.angle_beta          67.92 
_cell.angle_gamma         88.272 
_cell.entry_id            7B7H 
_cell.length_a            47.333 
_cell.length_b            47.298 
_cell.length_c            51.112 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7B7H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 P N N 
? 5 Q N N 
? 5 R N N 
? 5 S N N 
? 5 T N N 
? 5 U N N 
? 5 V N N 
? 5 W N N 
? 5 X N N 
? 5 Y N N 
? 5 Z N N 
? 5 AA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O LEU 239 A LEU 250 1_555 N NA NA . A NA 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? 
metalc ? metalc2 A O ASP 242 A ASP 253 1_555 N NA NA . A NA 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
metalc ? metalc3 A O VAL 245 A VAL 256 1_555 N NA NA . A NA 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc4 A O HIS 292 A HIS 303 1_555 O NA NA . A NA 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc5 A O GLU 294 A GLU 305 1_555 O NA NA . A NA 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc6 N NA NA . A NA 513 1_555 Y O1 EDO . A EDO 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc7 N NA NA . A NA 513 1_555 EA OXT GLY . A GLY 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
metalc ? metalc8 O NA NA . A NA 514 1_555 FA O HOH . A HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? 
metalc ? metalc9 O NA NA . A NA 514 1_555 FA O HOH . A HOH 679 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc10 O NA NA . A NA 514 1_555 FA O HOH . A HOH 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 92 n n 
C1 C2 EDO sing 93 n n 
C1 H11 EDO sing 94 n n 
C1 H12 EDO sing 95 n n 
O1 HO1 EDO sing 96 n n 
C2 O2 EDO sing 97 n n 
C2 H21 EDO sing 98 n n 
C2 H22 EDO sing 99 n n 
O2 HO2 EDO sing 100 n n 
#
_atom_sites.entry_id                     7B7H 
_atom_sites.fract_transf_matrix[1][1]    0.021127 
_atom_sites.fract_transf_matrix[1][2]    -0.000637 
_atom_sites.fract_transf_matrix[1][3]    -0.009503 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021152 
_atom_sites.fract_transf_matrix[2][3]    -0.012066 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024307 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GCU A 1 501 501 GCU GCU . 
C 3 DMS A 1 502 1 DMS DMS . 
D 3 DMS A 1 503 2 DMS DMS . 
E 3 DMS A 1 504 3 DMS DMS . 
F 3 DMS A 1 505 5 DMS DMS . 
G 3 DMS A 1 506 6 DMS DMS . 
H 3 DMS A 1 507 7 DMS DMS . 
I 3 DMS A 1 508 8 DMS DMS . 
J 3 DMS A 1 509 9 DMS DMS . 
K 3 DMS A 1 510 10 DMS DMS . 
L 3 DMS A 1 511 11 DMS DMS . 
M 3 DMS A 1 512 12 DMS DMS . 
N 4 NA A 1 513 2 NA NA . 
O 4 NA A 1 514 3 NA NA . 
P 5 EDO A 1 515 2 EDO EDO . 
Q 5 EDO A 1 516 3 EDO EDO . 
R 5 EDO A 1 517 4 EDO EDO . 
S 5 EDO A 1 518 5 EDO EDO . 
T 5 EDO A 1 519 6 EDO EDO . 
U 5 EDO A 1 520 7 EDO EDO . 
V 5 EDO A 1 521 9 EDO EDO . 
W 5 EDO A 1 522 12 EDO EDO . 
X 5 EDO A 1 523 13 EDO EDO . 
Y 5 EDO A 1 524 15 EDO EDO . 
Z 5 EDO A 1 525 17 EDO EDO . 
AA 5 EDO A 1 526 18 EDO EDO . 
BA 6 GLY A 1 527 601 GLY GLY . 
CA 6 GLY A 1 528 701 GLY GLY . 
DA 6 GLY A 1 529 801 GLY GLY . 
EA 6 GLY A 1 530 901 GLY GLY . 
FA 7 HOH A 1 601 77 HOH HOH . 
FA 7 HOH A 2 602 74 HOH HOH . 
FA 7 HOH A 3 603 34 HOH HOH . 
FA 7 HOH A 4 604 53 HOH HOH . 
FA 7 HOH A 5 605 115 HOH HOH . 
FA 7 HOH A 6 606 109 HOH HOH . 
FA 7 HOH A 7 607 47 HOH HOH . 
FA 7 HOH A 8 608 126 HOH HOH . 
FA 7 HOH A 9 609 114 HOH HOH . 
FA 7 HOH A 10 610 72 HOH HOH . 
FA 7 HOH A 11 611 111 HOH HOH . 
FA 7 HOH A 12 612 122 HOH HOH . 
FA 7 HOH A 13 613 100 HOH HOH . 
FA 7 HOH A 14 614 61 HOH HOH . 
FA 7 HOH A 15 615 112 HOH HOH . 
FA 7 HOH A 16 616 55 HOH HOH . 
FA 7 HOH A 17 617 98 HOH HOH . 
FA 7 HOH A 18 618 10 HOH HOH . 
FA 7 HOH A 19 619 69 HOH HOH . 
FA 7 HOH A 20 620 57 HOH HOH . 
FA 7 HOH A 21 621 51 HOH HOH . 
FA 7 HOH A 22 622 49 HOH HOH . 
FA 7 HOH A 23 623 22 HOH HOH . 
FA 7 HOH A 24 624 40 HOH HOH . 
FA 7 HOH A 25 625 20 HOH HOH . 
FA 7 HOH A 26 626 96 HOH HOH . 
FA 7 HOH A 27 627 70 HOH HOH . 
FA 7 HOH A 28 628 36 HOH HOH . 
FA 7 HOH A 29 629 117 HOH HOH . 
FA 7 HOH A 30 630 16 HOH HOH . 
FA 7 HOH A 31 631 56 HOH HOH . 
FA 7 HOH A 32 632 44 HOH HOH . 
FA 7 HOH A 33 633 25 HOH HOH . 
FA 7 HOH A 34 634 12 HOH HOH . 
FA 7 HOH A 35 635 21 HOH HOH . 
FA 7 HOH A 36 636 45 HOH HOH . 
FA 7 HOH A 37 637 32 HOH HOH . 
FA 7 HOH A 38 638 3 HOH HOH . 
FA 7 HOH A 39 639 54 HOH HOH . 
FA 7 HOH A 40 640 5 HOH HOH . 
FA 7 HOH A 41 641 27 HOH HOH . 
FA 7 HOH A 42 642 37 HOH HOH . 
FA 7 HOH A 43 643 14 HOH HOH . 
FA 7 HOH A 44 644 58 HOH HOH . 
FA 7 HOH A 45 645 24 HOH HOH . 
FA 7 HOH A 46 646 93 HOH HOH . 
FA 7 HOH A 47 647 30 HOH HOH . 
FA 7 HOH A 48 648 82 HOH HOH . 
FA 7 HOH A 49 649 39 HOH HOH . 
FA 7 HOH A 50 650 60 HOH HOH . 
FA 7 HOH A 51 651 62 HOH HOH . 
FA 7 HOH A 52 652 41 HOH HOH . 
FA 7 HOH A 53 653 59 HOH HOH . 
FA 7 HOH A 54 654 125 HOH HOH . 
FA 7 HOH A 55 655 48 HOH HOH . 
FA 7 HOH A 56 656 46 HOH HOH . 
FA 7 HOH A 57 657 38 HOH HOH . 
FA 7 HOH A 58 658 63 HOH HOH . 
FA 7 HOH A 59 659 7 HOH HOH . 
FA 7 HOH A 60 660 13 HOH HOH . 
FA 7 HOH A 61 661 23 HOH HOH . 
FA 7 HOH A 62 662 33 HOH HOH . 
FA 7 HOH A 63 663 4 HOH HOH . 
FA 7 HOH A 64 664 31 HOH HOH . 
FA 7 HOH A 65 665 29 HOH HOH . 
FA 7 HOH A 66 666 9 HOH HOH . 
FA 7 HOH A 67 667 101 HOH HOH . 
FA 7 HOH A 68 668 83 HOH HOH . 
FA 7 HOH A 69 669 43 HOH HOH . 
FA 7 HOH A 70 670 28 HOH HOH . 
FA 7 HOH A 71 671 65 HOH HOH . 
FA 7 HOH A 72 672 18 HOH HOH . 
FA 7 HOH A 73 673 64 HOH HOH . 
FA 7 HOH A 74 674 102 HOH HOH . 
FA 7 HOH A 75 675 15 HOH HOH . 
FA 7 HOH A 76 676 73 HOH HOH . 
FA 7 HOH A 77 677 105 HOH HOH . 
FA 7 HOH A 78 678 6 HOH HOH . 
FA 7 HOH A 79 679 8 HOH HOH . 
FA 7 HOH A 80 680 107 HOH HOH . 
FA 7 HOH A 81 681 76 HOH HOH . 
FA 7 HOH A 82 682 11 HOH HOH . 
FA 7 HOH A 83 683 68 HOH HOH . 
FA 7 HOH A 84 684 88 HOH HOH . 
FA 7 HOH A 85 685 26 HOH HOH . 
FA 7 HOH A 86 686 52 HOH HOH . 
FA 7 HOH A 87 687 1 HOH HOH . 
FA 7 HOH A 88 688 66 HOH HOH . 
FA 7 HOH A 89 689 78 HOH HOH . 
FA 7 HOH A 90 690 35 HOH HOH . 
FA 7 HOH A 91 691 17 HOH HOH . 
FA 7 HOH A 92 692 19 HOH HOH . 
FA 7 HOH A 93 693 97 HOH HOH . 
FA 7 HOH A 94 694 67 HOH HOH . 
FA 7 HOH A 95 695 79 HOH HOH . 
FA 7 HOH A 96 696 42 HOH HOH . 
FA 7 HOH A 97 697 118 HOH HOH . 
FA 7 HOH A 98 698 90 HOH HOH . 
FA 7 HOH A 99 699 92 HOH HOH . 
FA 7 HOH A 100 700 71 HOH HOH . 
FA 7 HOH A 101 701 119 HOH HOH . 
FA 7 HOH A 102 702 2 HOH HOH . 
FA 7 HOH A 103 703 113 HOH HOH . 
FA 7 HOH A 104 704 50 HOH HOH . 
FA 7 HOH A 105 705 121 HOH HOH . 
FA 7 HOH A 106 706 123 HOH HOH . 
FA 7 HOH A 107 707 86 HOH HOH . 
FA 7 HOH A 108 708 120 HOH HOH . 
FA 7 HOH A 109 709 104 HOH HOH . 
FA 7 HOH A 110 710 94 HOH HOH . 
FA 7 HOH A 111 711 87 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . Q 5 -10.011 33.677 27.229 1 45.92 ? C1 EDO 516 A 1 
HETATM 2 O O1 EDO . . . Q 5 -9.638 32.468 26.556 1 41.88 ? O1 EDO 516 A 1 
HETATM 3 C C2 EDO . . . Q 5 -9.906 34.77 26.18 1 44.83 ? C2 EDO 516 A 1 
HETATM 4 O O2 EDO . . . Q 5 -9.122 34.235 25.1 1 44.73 ? O2 EDO 516 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#