data_7B7S
#
_model_server_result.job_id            Yt8TRb-UPP50bfmSx-6P5Q 
_model_server_result.datetime_utc      '2024-11-28 18:56:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7b7s 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":601}' 
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_entry.id    7B7S 
#
_exptl.entry_id    7B7S 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              108.159 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            MONOTHIOGLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          106.28 
_cell.angle_gamma         90 
_cell.entry_id            7B7S 
_cell.length_a            70.077 
_cell.length_b            164.7 
_cell.length_c            73.411 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 7B7S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
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loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L 1 1 
C,D,H,I,J,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C TYR 160 A TYR 159 1_555 A N TPO 161 A TPO 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale2 A C TPO 161 A TPO 160 1_555 A N HIS 162 A HIS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
covale ? covale3 C C TYR 160 C TYR 159 1_555 C N TPO 161 C TPO 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 C C TPO 161 C TPO 160 1_555 C N HIS 162 C HIS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? 
#
_chem_comp.formula           'C3 H8 O2 S' 
_chem_comp.formula_weight    108.159 
_chem_comp.id                SGM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              MONOTHIOGLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 SGM sing 293 n n 
C1 S1 SGM sing 294 n n 
C1 H11 SGM sing 295 n n 
C1 H12 SGM sing 296 n n 
C2 O2 SGM sing 297 n n 
C2 C3 SGM sing 298 n n 
C2 H2 SGM sing 299 n n 
O2 HO2 SGM sing 300 n n 
C3 O3 SGM sing 301 n n 
C3 H31 SGM sing 302 n n 
C3 H32 SGM sing 303 n n 
O3 HO3 SGM sing 304 n n 
S1 HS1 SGM sing 305 n n 
#
_atom_sites.entry_id                     7B7S 
_atom_sites.fract_transf_matrix[1][1]    0.01427 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004167 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006072 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014191 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 T1T A 1 301 301 T1T DRG . 
F 4 NO3 A 1 302 401 NO3 NO3 . 
G 5 SO4 A 1 303 2 SO4 SO4 . 
H 3 T1T C 1 301 301 T1T DRG . 
I 4 NO3 C 1 302 401 NO3 NO3 . 
J 6 SGM D 1 601 601 SGM SGM . 
K 7 HOH A 1 401 30 HOH HOH . 
K 7 HOH A 2 402 35 HOH HOH . 
K 7 HOH A 3 403 15 HOH HOH . 
K 7 HOH A 4 404 61 HOH HOH . 
K 7 HOH A 5 405 62 HOH HOH . 
K 7 HOH A 6 406 66 HOH HOH . 
K 7 HOH A 7 407 64 HOH HOH . 
K 7 HOH A 8 408 63 HOH HOH . 
K 7 HOH A 9 409 19 HOH HOH . 
K 7 HOH A 10 410 49 HOH HOH . 
K 7 HOH A 11 411 54 HOH HOH . 
K 7 HOH A 12 412 9 HOH HOH . 
K 7 HOH A 13 413 22 HOH HOH . 
K 7 HOH A 14 414 21 HOH HOH . 
K 7 HOH A 15 415 44 HOH HOH . 
K 7 HOH A 16 416 65 HOH HOH . 
K 7 HOH A 17 417 11 HOH HOH . 
L 7 HOH B 1 501 14 HOH HOH . 
L 7 HOH B 2 502 55 HOH HOH . 
L 7 HOH B 3 503 7 HOH HOH . 
L 7 HOH B 4 504 33 HOH HOH . 
L 7 HOH B 5 505 31 HOH HOH . 
L 7 HOH B 6 506 27 HOH HOH . 
L 7 HOH B 7 507 58 HOH HOH . 
L 7 HOH B 8 508 20 HOH HOH . 
L 7 HOH B 9 509 6 HOH HOH . 
L 7 HOH B 10 510 28 HOH HOH . 
L 7 HOH B 11 511 42 HOH HOH . 
L 7 HOH B 12 512 47 HOH HOH . 
L 7 HOH B 13 513 37 HOH HOH . 
L 7 HOH B 14 514 5 HOH HOH . 
L 7 HOH B 15 515 24 HOH HOH . 
L 7 HOH B 16 516 25 HOH HOH . 
L 7 HOH B 17 517 16 HOH HOH . 
L 7 HOH B 18 518 12 HOH HOH . 
L 7 HOH B 19 519 46 HOH HOH . 
L 7 HOH B 20 520 3 HOH HOH . 
M 7 HOH C 1 401 70 HOH HOH . 
M 7 HOH C 2 402 73 HOH HOH . 
M 7 HOH C 3 403 26 HOH HOH . 
M 7 HOH C 4 404 1 HOH HOH . 
M 7 HOH C 5 405 59 HOH HOH . 
M 7 HOH C 6 406 76 HOH HOH . 
M 7 HOH C 7 407 75 HOH HOH . 
M 7 HOH C 8 408 53 HOH HOH . 
M 7 HOH C 9 409 68 HOH HOH . 
M 7 HOH C 10 410 43 HOH HOH . 
M 7 HOH C 11 411 29 HOH HOH . 
M 7 HOH C 12 412 74 HOH HOH . 
M 7 HOH C 13 413 39 HOH HOH . 
M 7 HOH C 14 414 17 HOH HOH . 
M 7 HOH C 15 415 38 HOH HOH . 
M 7 HOH C 16 416 36 HOH HOH . 
M 7 HOH C 17 417 32 HOH HOH . 
M 7 HOH C 18 418 57 HOH HOH . 
M 7 HOH C 19 419 71 HOH HOH . 
M 7 HOH C 20 420 77 HOH HOH . 
M 7 HOH C 21 421 41 HOH HOH . 
M 7 HOH C 22 422 60 HOH HOH . 
M 7 HOH C 23 423 56 HOH HOH . 
M 7 HOH C 24 424 45 HOH HOH . 
M 7 HOH C 25 425 72 HOH HOH . 
M 7 HOH C 26 426 69 HOH HOH . 
N 7 HOH D 1 701 4 HOH HOH . 
N 7 HOH D 2 702 40 HOH HOH . 
N 7 HOH D 3 703 51 HOH HOH . 
N 7 HOH D 4 704 67 HOH HOH . 
N 7 HOH D 5 705 23 HOH HOH . 
N 7 HOH D 6 706 52 HOH HOH . 
N 7 HOH D 7 707 10 HOH HOH . 
N 7 HOH D 8 708 2 HOH HOH . 
N 7 HOH D 9 709 48 HOH HOH . 
N 7 HOH D 10 710 18 HOH HOH . 
N 7 HOH D 11 711 34 HOH HOH . 
N 7 HOH D 12 712 13 HOH HOH . 
N 7 HOH D 13 713 8 HOH HOH . 
N 7 HOH D 14 714 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 SGM . . . J 6 13.655 9.5 14.962 1 59.97 ? C1 SGM 601 D 1 
HETATM 2 C C2 SGM . . . J 6 13.568 9.755 13.462 1 60.07 ? C2 SGM 601 D 1 
HETATM 3 O O2 SGM . . . J 6 13.319 8.519 12.782 1 56.04 ? O2 SGM 601 D 1 
HETATM 4 C C3 SGM . . . J 6 14.881 10.35 12.97 1 62.95 ? C3 SGM 601 D 1 
HETATM 5 O O3 SGM . . . J 6 14.983 10.176 11.552 1 65.16 ? O3 SGM 601 D 1 
HETATM 6 S S1 SGM . . . J 6 13.845 11.028 15.914 1 62.62 ? S1 SGM 601 D 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
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