data_7B81
#
_model_server_result.job_id            aguc6nw3veShv2PVXrofVw 
_model_server_result.datetime_utc      '2025-03-13 19:22:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7b81 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    7B81 
#
_exptl.entry_id    7B81 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7B81 
_cell.length_a            68.507 
_cell.length_b            95.5 
_cell.length_c            70.934 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7B81 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 237 n n 
PA O2A NAD sing 238 n n 
PA O5B NAD sing 239 n n 
PA O3 NAD sing 240 n n 
O2A HOA2 NAD sing 241 n n 
O5B C5B NAD sing 242 n n 
C5B C4B NAD sing 243 n n 
C5B H51A NAD sing 244 n n 
C5B H52A NAD sing 245 n n 
C4B O4B NAD sing 246 n n 
C4B C3B NAD sing 247 n n 
C4B H4B NAD sing 248 n n 
O4B C1B NAD sing 249 n n 
C3B O3B NAD sing 250 n n 
C3B C2B NAD sing 251 n n 
C3B H3B NAD sing 252 n n 
O3B HO3A NAD sing 253 n n 
C2B O2B NAD sing 254 n n 
C2B C1B NAD sing 255 n n 
C2B H2B NAD sing 256 n n 
O2B HO2A NAD sing 257 n n 
C1B N9A NAD sing 258 n n 
C1B H1B NAD sing 259 n n 
N9A C8A NAD sing 260 n y 
N9A C4A NAD sing 261 n y 
C8A N7A NAD doub 262 n y 
C8A H8A NAD sing 263 n n 
N7A C5A NAD sing 264 n y 
C5A C6A NAD sing 265 n y 
C5A C4A NAD doub 266 n y 
C6A N6A NAD sing 267 n n 
C6A N1A NAD doub 268 n y 
N6A H61A NAD sing 269 n n 
N6A H62A NAD sing 270 n n 
N1A C2A NAD sing 271 n y 
C2A N3A NAD doub 272 n y 
C2A H2A NAD sing 273 n n 
N3A C4A NAD sing 274 n y 
O3 PN NAD sing 275 n n 
PN O1N NAD doub 276 n n 
PN O2N NAD sing 277 n n 
PN O5D NAD sing 278 n n 
O5D C5D NAD sing 279 n n 
C5D C4D NAD sing 280 n n 
C5D H51N NAD sing 281 n n 
C5D H52N NAD sing 282 n n 
C4D O4D NAD sing 283 n n 
C4D C3D NAD sing 284 n n 
C4D H4D NAD sing 285 n n 
O4D C1D NAD sing 286 n n 
C3D O3D NAD sing 287 n n 
C3D C2D NAD sing 288 n n 
C3D H3D NAD sing 289 n n 
O3D HO3N NAD sing 290 n n 
C2D O2D NAD sing 291 n n 
C2D C1D NAD sing 292 n n 
C2D H2D NAD sing 293 n n 
O2D HO2N NAD sing 294 n n 
C1D N1N NAD sing 295 n n 
C1D H1D NAD sing 296 n n 
N1N C2N NAD sing 297 n y 
N1N C6N NAD doub 298 n y 
C2N C3N NAD doub 299 n y 
C2N H2N NAD sing 300 n n 
C3N C7N NAD sing 301 n n 
C3N C4N NAD sing 302 n y 
C7N O7N NAD doub 303 n n 
C7N N7N NAD sing 304 n n 
N7N H71N NAD sing 305 n n 
N7N H72N NAD sing 306 n n 
C4N C5N NAD doub 307 n y 
C4N H4N NAD sing 308 n n 
C5N C6N NAD sing 309 n y 
C5N H5N NAD sing 310 n n 
C6N H6N NAD sing 311 n n 
#
_atom_sites.entry_id                     7B81 
_atom_sites.fract_transf_matrix[1][1]    0.014597 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010471 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014098 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAD A 1 301 301 NAD NAD . 
D 2 NAD B 1 301 301 NAD NAD . 
E 3 HOH A 1 401 6 HOH HOH . 
E 3 HOH A 2 402 1 HOH HOH . 
E 3 HOH A 3 403 3 HOH HOH . 
E 3 HOH A 4 404 14 HOH HOH . 
E 3 HOH A 5 405 8 HOH HOH . 
E 3 HOH A 6 406 22 HOH HOH . 
E 3 HOH A 7 407 12 HOH HOH . 
E 3 HOH A 8 408 16 HOH HOH . 
E 3 HOH A 9 409 13 HOH HOH . 
E 3 HOH A 10 410 9 HOH HOH . 
E 3 HOH A 11 411 18 HOH HOH . 
F 3 HOH B 1 401 4 HOH HOH . 
F 3 HOH B 2 402 7 HOH HOH . 
F 3 HOH B 3 403 19 HOH HOH . 
F 3 HOH B 4 404 2 HOH HOH . 
F 3 HOH B 5 405 20 HOH HOH . 
F 3 HOH B 6 406 11 HOH HOH . 
F 3 HOH B 7 407 10 HOH HOH . 
F 3 HOH B 8 408 17 HOH HOH . 
F 3 HOH B 9 409 5 HOH HOH . 
F 3 HOH B 10 410 21 HOH HOH . 
F 3 HOH B 11 411 23 HOH HOH . 
F 3 HOH B 12 412 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . D 2 16.135 16.894 -30.93 1 88.98 ? PA NAD 301 B 1 
HETATM 2 O O1A NAD . . . D 2 15.818 18.331 -31.221 1 83.92 ? O1A NAD 301 B 1 
HETATM 3 O O2A NAD . . . D 2 17.13 16.383 -31.942 1 86.76 ? O2A NAD 301 B 1 
HETATM 4 O O5B NAD . . . D 2 16.779 16.754 -29.41 1 80.85 ? O5B NAD 301 B 1 
HETATM 5 C C5B NAD . . . D 2 16.39 17.692 -28.438 1 78.3 ? C5B NAD 301 B 1 
HETATM 6 C C4B NAD . . . D 2 17.631 18.255 -27.664 1 77.32 ? C4B NAD 301 B 1 
HETATM 7 O O4B NAD . . . D 2 18.338 17.313 -27.13 1 73.47 ? O4B NAD 301 B 1 
HETATM 8 C C3B NAD . . . D 2 18.579 18.98 -28.64 1 74.75 ? C3B NAD 301 B 1 
HETATM 9 O O3B NAD . . . D 2 18.596 20.309 -28.369 1 71.82 ? O3B NAD 301 B 1 
HETATM 10 C C2B NAD . . . D 2 19.964 18.347 -28.355 1 76.86 ? C2B NAD 301 B 1 
HETATM 11 O O2B NAD . . . D 2 21.074 19.388 -28.503 1 75.66 ? O2B NAD 301 B 1 
HETATM 12 C C1B NAD . . . D 2 19.829 17.971 -27.138 1 75.62 ? C1B NAD 301 B 1 
HETATM 13 N N9A NAD . . . D 2 20.869 17.051 -26.735 1 73.33 ? N9A NAD 301 B 1 
HETATM 14 C C8A NAD . . . D 2 21.189 15.866 -27.286 1 72.99 ? C8A NAD 301 B 1 
HETATM 15 N N7A NAD . . . D 2 22.222 15.362 -26.596 1 68.62 ? N7A NAD 301 B 1 
HETATM 16 C C5A NAD . . . D 2 22.541 16.231 -25.625 1 71.74 ? C5A NAD 301 B 1 
HETATM 17 C C6A NAD . . . D 2 23.502 16.214 -24.65 1 72.37 ? C6A NAD 301 B 1 
HETATM 18 N N6A NAD . . . D 2 24.522 15.218 -24.337 1 72.73 ? N6A NAD 301 B 1 
HETATM 19 N N1A NAD . . . D 2 23.602 17.236 -23.792 1 73.29 ? N1A NAD 301 B 1 
HETATM 20 C C2A NAD . . . D 2 22.761 18.291 -23.877 1 73.06 ? C2A NAD 301 B 1 
HETATM 21 N N3A NAD . . . D 2 21.811 18.314 -24.838 1 74.31 ? N3A NAD 301 B 1 
HETATM 22 C C4A NAD . . . D 2 21.706 17.276 -25.712 1 73.01 ? C4A NAD 301 B 1 
HETATM 23 O O3 NAD . . . D 2 14.752 16.009 -31.021 1 91.01 ? O3 NAD 301 B 1 
HETATM 24 P PN NAD . . . D 2 13.553 16.008 -29.848 1 86.18 ? PN NAD 301 B 1 
HETATM 25 O O1N NAD . . . D 2 12.326 15.286 -30.38 1 78.57 ? O1N NAD 301 B 1 
HETATM 26 O O2N NAD . . . D 2 13.187 17.418 -29.489 1 71.96 ? O2N NAD 301 B 1 
HETATM 27 O O5D NAD . . . D 2 14.09 15.242 -28.519 1 78.24 ? O5D NAD 301 B 1 
HETATM 28 C C5D NAD . . . D 2 13.763 15.799 -27.252 1 72.32 ? C5D NAD 301 B 1 
HETATM 29 C C4D NAD . . . D 2 13.495 14.676 -26.23 1 68.98 ? C4D NAD 301 B 1 
HETATM 30 O O4D NAD . . . D 2 12.28 14.201 -26.416 1 65.39 ? O4D NAD 301 B 1 
HETATM 31 C C3D NAD . . . D 2 14.48 13.496 -26.44 1 69.32 ? C3D NAD 301 B 1 
HETATM 32 O O3D NAD . . . D 2 15.012 13.124 -25.262 1 69.69 ? O3D NAD 301 B 1 
HETATM 33 C C2D NAD . . . D 2 13.609 12.354 -27.036 1 68.83 ? C2D NAD 301 B 1 
HETATM 34 O O2D NAD . . . D 2 14.121 11.016 -26.564 1 66.66 ? O2D NAD 301 B 1 
HETATM 35 C C1D NAD . . . D 2 12.411 12.588 -26.548 1 66.73 ? C1D NAD 301 B 1 
HETATM 36 N N1N NAD . . . D 2 11.376 12.105 -27.382 1 68.71 ? N1N NAD 301 B 1 
HETATM 37 C C2N NAD . . . D 2 11.319 12.426 -28.733 1 65.36 ? C2N NAD 301 B 1 
HETATM 38 C C3N NAD . . . D 2 10.259 11.925 -29.519 1 65.8 ? C3N NAD 301 B 1 
HETATM 39 C C7N NAD . . . D 2 10.158 12.244 -30.991 1 67.39 ? C7N NAD 301 B 1 
HETATM 40 O O7N NAD . . . D 2 9.087 12.297 -31.492 1 65.06 ? O7N NAD 301 B 1 
HETATM 41 N N7N NAD . . . D 2 11.391 12.476 -31.807 1 77.06 ? N7N NAD 301 B 1 
HETATM 42 C C4N NAD . . . D 2 9.295 11.131 -28.965 1 58.74 ? C4N NAD 301 B 1 
HETATM 43 C C5N NAD . . . D 2 9.351 10.818 -27.626 1 61.02 ? C5N NAD 301 B 1 
HETATM 44 C C6N NAD . . . D 2 10.413 11.32 -26.834 1 61.25 ? C6N NAD 301 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           510 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           44 
#