data_7B8C # _model_server_result.job_id 60whdD9AODqQ5b-BGJhk8w _model_server_result.datetime_utc '2024-11-26 18:57:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b8c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":511}' # _entry.id 7B8C # _exptl.entry_id 7B8C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 231.294 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-methyl-~{N}-(2-methylpropyl)imidazo[1,2-a]pyridine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7B8C _cell.length_a 60.63 _cell.length_b 72.387 _cell.length_c 78.763 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B8C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.065 ? disulf ? disulf4 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.996 ? disulf ? disulf5 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? disulf ? disulf6 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf7 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf8 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 C C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? # _chem_comp.formula 'C13 H17 N3 O' _chem_comp.formula_weight 231.294 _chem_comp.id GRV _chem_comp.mon_nstd_flag . _chem_comp.name 2-methyl-~{N}-(2-methylpropyl)imidazo[1,2-a]pyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C5 GRV sing 147 n y C6 C7 GRV doub 148 n y C5 C4 GRV doub 149 n y C7 C8 GRV sing 150 n y C4 N1 GRV sing 151 n y C8 N1 GRV sing 152 n y C8 N2 GRV doub 153 n y N1 C3 GRV sing 154 n y N2 C2 GRV sing 155 n y C3 C2 GRV doub 156 n y C3 C9 GRV sing 157 n n C2 C1 GRV sing 158 n n O1 C9 GRV doub 159 n n C9 N3 GRV sing 160 n n N3 C10 GRV sing 161 n n C10 C11 GRV sing 162 n n C11 C13 GRV sing 163 n n C11 C12 GRV sing 164 n n N3 H1 GRV sing 165 n n C4 H2 GRV sing 166 n n C5 H3 GRV sing 167 n n C6 H4 GRV sing 168 n n C7 H5 GRV sing 169 n n C10 H6 GRV sing 170 n n C10 H7 GRV sing 171 n n C13 H8 GRV sing 172 n n C13 H9 GRV sing 173 n n C13 H10 GRV sing 174 n n C1 H11 GRV sing 175 n n C1 H12 GRV sing 176 n n C1 H13 GRV sing 177 n n C11 H14 GRV sing 178 n n C12 H15 GRV sing 179 n n C12 H16 GRV sing 180 n n C12 H17 GRV sing 181 n n # _atom_sites.entry_id 7B8C _atom_sites.fract_transf_matrix[1][1] 0.016493 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013815 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012696 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 501 602 SO4 SO4 . C 3 NAG A 1 502 1452 NAG NAG . D 4 DMS A 1 503 1501 DMS DMS . E 2 SO4 A 1 504 1 SO4 SO4 . F 2 SO4 A 1 505 8 SO4 SO4 . G 2 SO4 A 1 506 9 SO4 SO4 . H 2 SO4 A 1 507 10 SO4 SO4 . I 2 SO4 A 1 508 11 SO4 SO4 . J 2 SO4 A 1 509 12 SO4 SO4 . K 5 EDO A 1 510 5 EDO EDO . L 6 GRV A 1 511 1 GRV LIG . M 7 HOH A 1 601 1081 HOH HOH . M 7 HOH A 2 602 23 HOH HOH . M 7 HOH A 3 603 1033 HOH HOH . M 7 HOH A 4 604 1027 HOH HOH . M 7 HOH A 5 605 1086 HOH HOH . M 7 HOH A 6 606 1045 HOH HOH . M 7 HOH A 7 607 1047 HOH HOH . M 7 HOH A 8 608 1016 HOH HOH . M 7 HOH A 9 609 1046 HOH HOH . M 7 HOH A 10 610 1118 HOH HOH . M 7 HOH A 11 611 1197 HOH HOH . M 7 HOH A 12 612 1093 HOH HOH . M 7 HOH A 13 613 1159 HOH HOH . M 7 HOH A 14 614 1149 HOH HOH . M 7 HOH A 15 615 54 HOH HOH . M 7 HOH A 16 616 1001 HOH HOH . M 7 HOH A 17 617 36 HOH HOH . M 7 HOH A 18 618 1043 HOH HOH . M 7 HOH A 19 619 1169 HOH HOH . M 7 HOH A 20 620 27 HOH HOH . M 7 HOH A 21 621 1070 HOH HOH . M 7 HOH A 22 622 1036 HOH HOH . M 7 HOH A 23 623 1098 HOH HOH . M 7 HOH A 24 624 1048 HOH HOH . M 7 HOH A 25 625 1051 HOH HOH . M 7 HOH A 26 626 19 HOH HOH . M 7 HOH A 27 627 25 HOH HOH . M 7 HOH A 28 628 1004 HOH HOH . M 7 HOH A 29 629 1082 HOH HOH . M 7 HOH A 30 630 1059 HOH HOH . M 7 HOH A 31 631 1029 HOH HOH . M 7 HOH A 32 632 1041 HOH HOH . M 7 HOH A 33 633 1019 HOH HOH . M 7 HOH A 34 634 1133 HOH HOH . M 7 HOH A 35 635 32 HOH HOH . M 7 HOH A 36 636 1012 HOH HOH . M 7 HOH A 37 637 1008 HOH HOH . M 7 HOH A 38 638 57 HOH HOH . M 7 HOH A 39 639 1148 HOH HOH . M 7 HOH A 40 640 1196 HOH HOH . M 7 HOH A 41 641 1145 HOH HOH . M 7 HOH A 42 642 1123 HOH HOH . M 7 HOH A 43 643 1085 HOH HOH . M 7 HOH A 44 644 1068 HOH HOH . M 7 HOH A 45 645 1054 HOH HOH . M 7 HOH A 46 646 56 HOH HOH . M 7 HOH A 47 647 1154 HOH HOH . M 7 HOH A 48 648 12 HOH HOH . M 7 HOH A 49 649 1080 HOH HOH . M 7 HOH A 50 650 1040 HOH HOH . M 7 HOH A 51 651 20 HOH HOH . M 7 HOH A 52 652 1003 HOH HOH . M 7 HOH A 53 653 40 HOH HOH . M 7 HOH A 54 654 1199 HOH HOH . M 7 HOH A 55 655 1031 HOH HOH . M 7 HOH A 56 656 43 HOH HOH . M 7 HOH A 57 657 14 HOH HOH . M 7 HOH A 58 658 18 HOH HOH . M 7 HOH A 59 659 1058 HOH HOH . M 7 HOH A 60 660 1114 HOH HOH . M 7 HOH A 61 661 1018 HOH HOH . M 7 HOH A 62 662 1073 HOH HOH . M 7 HOH A 63 663 1063 HOH HOH . M 7 HOH A 64 664 1007 HOH HOH . M 7 HOH A 65 665 1057 HOH HOH . M 7 HOH A 66 666 59 HOH HOH . M 7 HOH A 67 667 1190 HOH HOH . M 7 HOH A 68 668 1109 HOH HOH . M 7 HOH A 69 669 11 HOH HOH . M 7 HOH A 70 670 1011 HOH HOH . M 7 HOH A 71 671 4 HOH HOH . M 7 HOH A 72 672 1064 HOH HOH . M 7 HOH A 73 673 1002 HOH HOH . M 7 HOH A 74 674 1015 HOH HOH . M 7 HOH A 75 675 37 HOH HOH . M 7 HOH A 76 676 1065 HOH HOH . M 7 HOH A 77 677 1006 HOH HOH . M 7 HOH A 78 678 1062 HOH HOH . M 7 HOH A 79 679 1077 HOH HOH . M 7 HOH A 80 680 29 HOH HOH . M 7 HOH A 81 681 13 HOH HOH . M 7 HOH A 82 682 1005 HOH HOH . M 7 HOH A 83 683 1091 HOH HOH . M 7 HOH A 84 684 15 HOH HOH . M 7 HOH A 85 685 1020 HOH HOH . M 7 HOH A 86 686 1037 HOH HOH . M 7 HOH A 87 687 1150 HOH HOH . M 7 HOH A 88 688 21 HOH HOH . M 7 HOH A 89 689 1026 HOH HOH . M 7 HOH A 90 690 1125 HOH HOH . M 7 HOH A 91 691 1038 HOH HOH . M 7 HOH A 92 692 1124 HOH HOH . M 7 HOH A 93 693 1013 HOH HOH . M 7 HOH A 94 694 1014 HOH HOH . M 7 HOH A 95 695 1067 HOH HOH . M 7 HOH A 96 696 7 HOH HOH . M 7 HOH A 97 697 1142 HOH HOH . M 7 HOH A 98 698 30 HOH HOH . M 7 HOH A 99 699 26 HOH HOH . M 7 HOH A 100 700 1071 HOH HOH . M 7 HOH A 101 701 1074 HOH HOH . M 7 HOH A 102 702 17 HOH HOH . M 7 HOH A 103 703 1052 HOH HOH . M 7 HOH A 104 704 1030 HOH HOH . M 7 HOH A 105 705 34 HOH HOH . M 7 HOH A 106 706 1039 HOH HOH . M 7 HOH A 107 707 1023 HOH HOH . M 7 HOH A 108 708 1017 HOH HOH . M 7 HOH A 109 709 1079 HOH HOH . M 7 HOH A 110 710 35 HOH HOH . M 7 HOH A 111 711 1140 HOH HOH . M 7 HOH A 112 712 1035 HOH HOH . M 7 HOH A 113 713 1078 HOH HOH . M 7 HOH A 114 714 1049 HOH HOH . M 7 HOH A 115 715 1042 HOH HOH . M 7 HOH A 116 716 1010 HOH HOH . M 7 HOH A 117 717 1106 HOH HOH . M 7 HOH A 118 718 1115 HOH HOH . M 7 HOH A 119 719 1092 HOH HOH . M 7 HOH A 120 720 39 HOH HOH . M 7 HOH A 121 721 1120 HOH HOH . M 7 HOH A 122 722 16 HOH HOH . M 7 HOH A 123 723 1113 HOH HOH . M 7 HOH A 124 724 1066 HOH HOH . M 7 HOH A 125 725 47 HOH HOH . M 7 HOH A 126 726 1191 HOH HOH . M 7 HOH A 127 727 1180 HOH HOH . M 7 HOH A 128 728 1155 HOH HOH . M 7 HOH A 129 729 1132 HOH HOH . M 7 HOH A 130 730 1162 HOH HOH . M 7 HOH A 131 731 1153 HOH HOH . M 7 HOH A 132 732 42 HOH HOH . M 7 HOH A 133 733 1129 HOH HOH . M 7 HOH A 134 734 1112 HOH HOH . M 7 HOH A 135 735 1152 HOH HOH . M 7 HOH A 136 736 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GRV . . . L 6 4.959 -5.618 7.759 1 34.09 ? N1 GRV 511 A 1 HETATM 2 N N3 GRV . . . L 6 1.598 -5.859 6.034 1 24.34 ? N3 GRV 511 A 1 HETATM 3 C C4 GRV . . . L 6 5.17 -6.717 8.543 1 36.74 ? C4 GRV 511 A 1 HETATM 4 C C5 GRV . . . L 6 6.437 -6.952 9.08 1 44.19 ? C5 GRV 511 A 1 HETATM 5 C C6 GRV . . . L 6 7.479 -6.05 8.836 1 44.49 ? C6 GRV 511 A 1 HETATM 6 C C7 GRV . . . L 6 7.219 -4.934 8.03 1 43.8 ? C7 GRV 511 A 1 HETATM 7 C C8 GRV . . . L 6 5.898 -4.745 7.492 1 37.35 ? C8 GRV 511 A 1 HETATM 8 C C10 GRV . . . L 6 0.313 -6.6 6.023 1 28.59 ? C10 GRV 511 A 1 HETATM 9 C C13 GRV . . . L 6 -0.681 -4.385 5.154 1 32.28 ? C13 GRV 511 A 1 HETATM 10 C C1 GRV . . . L 6 3.096 -3.161 5.614 1 31.74 ? C1 GRV 511 A 1 HETATM 11 C C2 GRV . . . L 6 4.069 -4.013 6.457 1 25.47 ? C2 GRV 511 A 1 HETATM 12 C C3 GRV . . . L 6 3.816 -5.203 7.164 1 25.54 ? C3 GRV 511 A 1 HETATM 13 N N2 GRV . . . L 6 5.363 -3.744 6.707 1 32.42 ? N2 GRV 511 A 1 HETATM 14 C C9 GRV . . . L 6 2.475 -5.943 7.225 1 24.88 ? C9 GRV 511 A 1 HETATM 15 O O1 GRV . . . L 6 2.155 -6.533 8.221 1 22.67 ? O1 GRV 511 A 1 HETATM 16 C C11 GRV . . . L 6 -0.72 -5.923 5.087 1 32.26 ? C11 GRV 511 A 1 HETATM 17 C C12 GRV . . . L 6 -0.656 -6.367 3.651 1 38.07 ? C12 GRV 511 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #