data_7B9N # _model_server_result.job_id 5pueTXyBtCfWTdYO8edoRg _model_server_result.datetime_utc '2024-11-22 19:23:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7b9n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":511}' # _entry.id 7B9N # _exptl.entry_id 7B9N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 167.162 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'benzyl hydroxycarbamate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7B9N _cell.length_a 60.016 _cell.length_b 73.227 _cell.length_c 78.74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7B9N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 L N N ? 5 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf4 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf5 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 C C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? # _chem_comp.formula 'C8 H9 N O3' _chem_comp.formula_weight 167.162 _chem_comp.id N9J _chem_comp.mon_nstd_flag . _chem_comp.name 'benzyl hydroxycarbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAD CAC N9J doub 246 n y CAD CAE N9J sing 247 n y CAC CAB N9J sing 248 n y CAG CAE N9J sing 249 n n CAG OAH N9J sing 250 n n NAK OAL N9J sing 251 n n NAK CAI N9J sing 252 n n CAE CAF N9J doub 253 n y OAH CAI N9J sing 254 n n CAB CAA N9J doub 255 n y CAI OAJ N9J doub 256 n n CAF CAA N9J sing 257 n y CAA H1 N9J sing 258 n n CAB H2 N9J sing 259 n n CAC H3 N9J sing 260 n n CAD H4 N9J sing 261 n n CAF H5 N9J sing 262 n n CAG H6 N9J sing 263 n n CAG H7 N9J sing 264 n n NAK H8 N9J sing 265 n n OAL H9 N9J sing 266 n n # _atom_sites.entry_id 7B9N _atom_sites.fract_transf_matrix[1][1] 0.016662 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013656 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0127 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 501 602 SO4 SO4 . C 3 NAG A 1 502 1452 NAG NAG . D 4 DMS A 1 503 1501 DMS DMS . E 4 DMS A 1 504 1601 DMS DMS . F 4 DMS A 1 505 1701 DMS DMS . G 2 SO4 A 1 506 1 SO4 SO4 . H 2 SO4 A 1 507 8 SO4 SO4 . I 2 SO4 A 1 508 10 SO4 SO4 . J 2 SO4 A 1 509 11 SO4 SO4 . K 2 SO4 A 1 510 12 SO4 SO4 . L 5 N9J A 1 511 1 N9J LIG . M 5 N9J A 1 512 2 N9J LIG . N 6 HOH A 1 601 1086 HOH HOH . N 6 HOH A 2 602 1050 HOH HOH . N 6 HOH A 3 603 1047 HOH HOH . N 6 HOH A 4 604 22 HOH HOH . N 6 HOH A 5 605 1046 HOH HOH . N 6 HOH A 6 606 23 HOH HOH . N 6 HOH A 7 607 1027 HOH HOH . N 6 HOH A 8 608 1082 HOH HOH . N 6 HOH A 9 609 1033 HOH HOH . N 6 HOH A 10 610 32 HOH HOH . N 6 HOH A 11 611 1008 HOH HOH . N 6 HOH A 12 612 1118 HOH HOH . N 6 HOH A 13 613 1059 HOH HOH . N 6 HOH A 14 614 1087 HOH HOH . N 6 HOH A 15 615 1031 HOH HOH . N 6 HOH A 16 616 1091 HOH HOH . N 6 HOH A 17 617 1196 HOH HOH . N 6 HOH A 18 618 1123 HOH HOH . N 6 HOH A 19 619 1036 HOH HOH . N 6 HOH A 20 620 1003 HOH HOH . N 6 HOH A 21 621 1001 HOH HOH . N 6 HOH A 22 622 1016 HOH HOH . N 6 HOH A 23 623 50 HOH HOH . N 6 HOH A 24 624 1197 HOH HOH . N 6 HOH A 25 625 1040 HOH HOH . N 6 HOH A 26 626 1070 HOH HOH . N 6 HOH A 27 627 33 HOH HOH . N 6 HOH A 28 628 1004 HOH HOH . N 6 HOH A 29 629 1073 HOH HOH . N 6 HOH A 30 630 1048 HOH HOH . N 6 HOH A 31 631 12 HOH HOH . N 6 HOH A 32 632 1043 HOH HOH . N 6 HOH A 33 633 1018 HOH HOH . N 6 HOH A 34 634 1045 HOH HOH . N 6 HOH A 35 635 1058 HOH HOH . N 6 HOH A 36 636 18 HOH HOH . N 6 HOH A 37 637 36 HOH HOH . N 6 HOH A 38 638 48 HOH HOH . N 6 HOH A 39 639 1191 HOH HOH . N 6 HOH A 40 640 1119 HOH HOH . N 6 HOH A 41 641 1063 HOH HOH . N 6 HOH A 42 642 1052 HOH HOH . N 6 HOH A 43 643 1029 HOH HOH . N 6 HOH A 44 644 1051 HOH HOH . N 6 HOH A 45 645 1010 HOH HOH . N 6 HOH A 46 646 1064 HOH HOH . N 6 HOH A 47 647 1074 HOH HOH . N 6 HOH A 48 648 1109 HOH HOH . N 6 HOH A 49 649 1054 HOH HOH . N 6 HOH A 50 650 11 HOH HOH . N 6 HOH A 51 651 1011 HOH HOH . N 6 HOH A 52 652 21 HOH HOH . N 6 HOH A 53 653 1017 HOH HOH . N 6 HOH A 54 654 1002 HOH HOH . N 6 HOH A 55 655 1149 HOH HOH . N 6 HOH A 56 656 1007 HOH HOH . N 6 HOH A 57 657 7 HOH HOH . N 6 HOH A 58 658 1012 HOH HOH . N 6 HOH A 59 659 1037 HOH HOH . N 6 HOH A 60 660 1038 HOH HOH . N 6 HOH A 61 661 1081 HOH HOH . N 6 HOH A 62 662 1190 HOH HOH . N 6 HOH A 63 663 1114 HOH HOH . N 6 HOH A 64 664 1019 HOH HOH . N 6 HOH A 65 665 1039 HOH HOH . N 6 HOH A 66 666 26 HOH HOH . N 6 HOH A 67 667 1020 HOH HOH . N 6 HOH A 68 668 1065 HOH HOH . N 6 HOH A 69 669 1035 HOH HOH . N 6 HOH A 70 670 1098 HOH HOH . N 6 HOH A 71 671 1106 HOH HOH . N 6 HOH A 72 672 1150 HOH HOH . N 6 HOH A 73 673 1068 HOH HOH . N 6 HOH A 74 674 1085 HOH HOH . N 6 HOH A 75 675 1062 HOH HOH . N 6 HOH A 76 676 1133 HOH HOH . N 6 HOH A 77 677 1026 HOH HOH . N 6 HOH A 78 678 1041 HOH HOH . N 6 HOH A 79 679 1078 HOH HOH . N 6 HOH A 80 680 1093 HOH HOH . N 6 HOH A 81 681 1092 HOH HOH . N 6 HOH A 82 682 1006 HOH HOH . N 6 HOH A 83 683 1005 HOH HOH . N 6 HOH A 84 684 1124 HOH HOH . N 6 HOH A 85 685 1015 HOH HOH . N 6 HOH A 86 686 1077 HOH HOH . N 6 HOH A 87 687 1014 HOH HOH . N 6 HOH A 88 688 1023 HOH HOH . N 6 HOH A 89 689 1067 HOH HOH . N 6 HOH A 90 690 30 HOH HOH . N 6 HOH A 91 691 1030 HOH HOH . N 6 HOH A 92 692 40 HOH HOH . N 6 HOH A 93 693 4 HOH HOH . N 6 HOH A 94 694 1079 HOH HOH . N 6 HOH A 95 695 1013 HOH HOH . N 6 HOH A 96 696 1199 HOH HOH . N 6 HOH A 97 697 1049 HOH HOH . N 6 HOH A 98 698 1115 HOH HOH . N 6 HOH A 99 699 1083 HOH HOH . N 6 HOH A 100 700 1120 HOH HOH . N 6 HOH A 101 701 1057 HOH HOH . N 6 HOH A 102 702 1042 HOH HOH . N 6 HOH A 103 703 1140 HOH HOH . N 6 HOH A 104 704 1142 HOH HOH . N 6 HOH A 105 705 1198 HOH HOH . N 6 HOH A 106 706 1155 HOH HOH . N 6 HOH A 107 707 1132 HOH HOH . N 6 HOH A 108 708 1162 HOH HOH . N 6 HOH A 109 709 42 HOH HOH . N 6 HOH A 110 710 1153 HOH HOH . N 6 HOH A 111 711 1152 HOH HOH . N 6 HOH A 112 712 1112 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA N9J . . . L 5 -0.915 -5.619 4.09 1 21 ? CAA N9J 511 A 1 HETATM 2 C CAB N9J . . . L 5 -1.599 -5.92 5.253 1 24.98 ? CAB N9J 511 A 1 HETATM 3 C CAC N9J . . . L 5 -1.126 -5.453 6.464 1 30.66 ? CAC N9J 511 A 1 HETATM 4 C CAD N9J . . . L 5 0.018 -4.677 6.522 1 26.79 ? CAD N9J 511 A 1 HETATM 5 C CAE N9J . . . L 5 0.697 -4.379 5.354 1 26.85 ? CAE N9J 511 A 1 HETATM 6 C CAF N9J . . . L 5 0.24 -4.859 4.139 1 24.48 ? CAF N9J 511 A 1 HETATM 7 C CAG N9J . . . L 5 1.972 -3.548 5.427 1 34.34 ? CAG N9J 511 A 1 HETATM 8 C CAI N9J . . . L 5 4.19 -4.077 5.955 1 30.09 ? CAI N9J 511 A 1 HETATM 9 N NAK N9J . . . L 5 5.09 -5.215 5.836 1 31.94 ? NAK N9J 511 A 1 HETATM 10 O OAH N9J . . . L 5 2.842 -4.286 6.241 1 36.96 ? OAH N9J 511 A 1 HETATM 11 O OAJ N9J . . . L 5 4.583 -2.966 5.811 1 29.3 ? OAJ N9J 511 A 1 HETATM 12 O OAL N9J . . . L 5 6.225 -5.138 5.008 1 43.57 ? OAL N9J 511 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #