data_7BAY # _model_server_result.job_id Sl4UOkvSgEUNC5eTbjqLQg _model_server_result.datetime_utc '2025-07-07 20:50:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bay # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1405}' # _entry.id 7BAY # _exptl.entry_id 7BAY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 104.171 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLINE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BAY _cell.length_a 114.904 _cell.length_b 52.207 _cell.length_c 73.99 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BAY _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N ? 2 I N N # _chem_comp.formula 'C5 H14 N O 1' _chem_comp.formula_weight 104.171 _chem_comp.id CHT _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLINE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 CHT sing 70 n n C4 O6 CHT sing 71 n n C4 HC41 CHT sing 72 n n C4 HC42 CHT sing 73 n n C5 N1 CHT sing 74 n n C5 HC51 CHT sing 75 n n C5 HC52 CHT sing 76 n n C6 N1 CHT sing 77 n n C6 H61 CHT sing 78 n n C6 H62 CHT sing 79 n n C6 H63 CHT sing 80 n n C7 N1 CHT sing 81 n n C7 H71 CHT sing 82 n n C7 H72 CHT sing 83 n n C7 H73 CHT sing 84 n n C8 N1 CHT sing 85 n n C8 H81 CHT sing 86 n n C8 H82 CHT sing 87 n n C8 H83 CHT sing 88 n n O6 HO6 CHT sing 89 n n # _atom_sites.entry_id 7BAY _atom_sites.fract_transf_matrix[1][1] 0.008703 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019155 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013515 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CHT AA 1 1401 1401 CHT CHT . C 2 CHT AA 1 1402 1501 CHT CHT . D 2 CHT AA 1 1403 1701 CHT CHT . E 3 PGE AA 1 1404 1801 PGE PGE . F 2 CHT AA 1 1405 1901 CHT CHT . G 2 CHT AA 1 1406 2001 CHT CHT . H 4 GOL AA 1 1407 2101 GOL GOL . I 2 CHT AA 1 1408 2201 CHT CHT . J 4 GOL AA 1 1409 2301 GOL GOL . K 4 GOL AA 1 1410 2401 GOL GOL . L 5 T7K AA 1 1411 2501 T7K 201 . M 6 HOH AA 1 1501 38 HOH HOH . M 6 HOH AA 2 1502 9 HOH HOH . M 6 HOH AA 3 1503 27 HOH HOH . M 6 HOH AA 4 1504 28 HOH HOH . M 6 HOH AA 5 1505 41 HOH HOH . M 6 HOH AA 6 1506 1 HOH HOH . M 6 HOH AA 7 1507 11 HOH HOH . M 6 HOH AA 8 1508 2 HOH HOH . M 6 HOH AA 9 1509 3 HOH HOH . M 6 HOH AA 10 1510 7 HOH HOH . M 6 HOH AA 11 1511 13 HOH HOH . M 6 HOH AA 12 1512 39 HOH HOH . M 6 HOH AA 13 1513 16 HOH HOH . M 6 HOH AA 14 1514 6 HOH HOH . M 6 HOH AA 15 1515 4 HOH HOH . M 6 HOH AA 16 1516 36 HOH HOH . M 6 HOH AA 17 1517 5 HOH HOH . M 6 HOH AA 18 1518 8 HOH HOH . M 6 HOH AA 19 1519 24 HOH HOH . M 6 HOH AA 20 1520 19 HOH HOH . M 6 HOH AA 21 1521 10 HOH HOH . M 6 HOH AA 22 1522 17 HOH HOH . M 6 HOH AA 23 1523 18 HOH HOH . M 6 HOH AA 24 1524 33 HOH HOH . M 6 HOH AA 25 1525 22 HOH HOH . M 6 HOH AA 26 1526 14 HOH HOH . M 6 HOH AA 27 1527 37 HOH HOH . M 6 HOH AA 28 1528 43 HOH HOH . M 6 HOH AA 29 1529 12 HOH HOH . M 6 HOH AA 30 1530 47 HOH HOH . M 6 HOH AA 31 1531 31 HOH HOH . M 6 HOH AA 32 1532 46 HOH HOH . M 6 HOH AA 33 1533 44 HOH HOH . M 6 HOH AA 34 1534 23 HOH HOH . M 6 HOH AA 35 1535 29 HOH HOH . M 6 HOH AA 36 1536 25 HOH HOH . M 6 HOH AA 37 1537 32 HOH HOH . M 6 HOH AA 38 1538 26 HOH HOH . M 6 HOH AA 39 1539 42 HOH HOH . M 6 HOH AA 40 1540 48 HOH HOH . M 6 HOH AA 41 1541 15 HOH HOH . M 6 HOH AA 42 1542 35 HOH HOH . M 6 HOH AA 43 1543 45 HOH HOH . M 6 HOH AA 44 1544 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 CHT . . . F 2 20.543 -30.796 45.043 1 85.29 ? C4 CHT 1405 AA 1 HETATM 2 C C5 CHT . . . F 2 20.964 -29.76 46.062 1 80.04 ? C5 CHT 1405 AA 1 HETATM 3 C C6 CHT . . . F 2 18.683 -28.867 46.251 1 68.38 ? C6 CHT 1405 AA 1 HETATM 4 C C7 CHT . . . F 2 20.282 -27.733 44.849 1 55.48 ? C7 CHT 1405 AA 1 HETATM 5 C C8 CHT . . . F 2 20.512 -27.66 47.24 1 62.8 ? C8 CHT 1405 AA 1 HETATM 6 O O6 CHT . . . F 2 21.503 -31.836 44.984 1 79.97 ? O6 CHT 1405 AA 1 HETATM 7 N N1 CHT . . . F 2 20.111 -28.508 46.098 1 64.69 ? N1 CHT 1405 AA 1 HETATM 8 H HC41 CHT . . . F 2 20.457 -30.379 44.163 1 102.66 ? HC41 CHT 1405 AA 1 HETATM 9 H HC42 CHT . . . F 2 19.673 -31.167 45.289 1 102.66 ? HC42 CHT 1405 AA 1 HETATM 10 H HC51 CHT . . . F 2 21.887 -29.497 45.879 1 96.35 ? HC51 CHT 1405 AA 1 HETATM 11 H HC52 CHT . . . F 2 20.948 -30.168 46.95 1 96.35 ? HC52 CHT 1405 AA 1 HETATM 12 H H61 CHT . . . F 2 18.163 -28.056 46.354 1 82.37 ? H61 CHT 1405 AA 1 HETATM 13 H H62 CHT . . . F 2 18.581 -29.427 47.035 1 82.37 ? H62 CHT 1405 AA 1 HETATM 14 H H63 CHT . . . F 2 18.393 -29.348 45.461 1 82.37 ? H63 CHT 1405 AA 1 HETATM 15 H H71 CHT . . . F 2 19.756 -26.921 44.907 1 66.89 ? H71 CHT 1405 AA 1 HETATM 16 H H72 CHT . . . F 2 19.98 -28.27 44.101 1 66.89 ? H72 CHT 1405 AA 1 HETATM 17 H H73 CHT . . . F 2 21.219 -27.513 44.74 1 66.89 ? H73 CHT 1405 AA 1 HETATM 18 H H81 CHT . . . F 2 19.985 -26.847 47.229 1 75.67 ? H81 CHT 1405 AA 1 HETATM 19 H H82 CHT . . . F 2 21.453 -27.446 47.159 1 75.67 ? H82 CHT 1405 AA 1 HETATM 20 H H83 CHT . . . F 2 20.353 -28.145 48.064 1 75.67 ? H83 CHT 1405 AA 1 HETATM 21 H HO6 CHT . . . F 2 21.577 -32.187 45.75 1 96.27 ? HO6 CHT 1405 AA 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #