data_7BAY # _model_server_result.job_id 67d2TKmCiAntE-k9btjnWA _model_server_result.datetime_utc '2025-07-08 01:29:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bay # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1409}' # _entry.id 7BAY # _exptl.entry_id 7BAY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BAY _cell.length_a 114.904 _cell.length_b 52.207 _cell.length_c 73.99 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BAY _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 J N N ? 4 K N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 136 n n C1 C2 GOL sing 137 n n C1 H11 GOL sing 138 n n C1 H12 GOL sing 139 n n O1 HO1 GOL sing 140 n n C2 O2 GOL sing 141 n n C2 C3 GOL sing 142 n n C2 H2 GOL sing 143 n n O2 HO2 GOL sing 144 n n C3 O3 GOL sing 145 n n C3 H31 GOL sing 146 n n C3 H32 GOL sing 147 n n O3 HO3 GOL sing 148 n n # _atom_sites.entry_id 7BAY _atom_sites.fract_transf_matrix[1][1] 0.008703 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019155 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013515 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CHT AA 1 1401 1401 CHT CHT . C 2 CHT AA 1 1402 1501 CHT CHT . D 2 CHT AA 1 1403 1701 CHT CHT . E 3 PGE AA 1 1404 1801 PGE PGE . F 2 CHT AA 1 1405 1901 CHT CHT . G 2 CHT AA 1 1406 2001 CHT CHT . H 4 GOL AA 1 1407 2101 GOL GOL . I 2 CHT AA 1 1408 2201 CHT CHT . J 4 GOL AA 1 1409 2301 GOL GOL . K 4 GOL AA 1 1410 2401 GOL GOL . L 5 T7K AA 1 1411 2501 T7K 201 . M 6 HOH AA 1 1501 38 HOH HOH . M 6 HOH AA 2 1502 9 HOH HOH . M 6 HOH AA 3 1503 27 HOH HOH . M 6 HOH AA 4 1504 28 HOH HOH . M 6 HOH AA 5 1505 41 HOH HOH . M 6 HOH AA 6 1506 1 HOH HOH . M 6 HOH AA 7 1507 11 HOH HOH . M 6 HOH AA 8 1508 2 HOH HOH . M 6 HOH AA 9 1509 3 HOH HOH . M 6 HOH AA 10 1510 7 HOH HOH . M 6 HOH AA 11 1511 13 HOH HOH . M 6 HOH AA 12 1512 39 HOH HOH . M 6 HOH AA 13 1513 16 HOH HOH . M 6 HOH AA 14 1514 6 HOH HOH . M 6 HOH AA 15 1515 4 HOH HOH . M 6 HOH AA 16 1516 36 HOH HOH . M 6 HOH AA 17 1517 5 HOH HOH . M 6 HOH AA 18 1518 8 HOH HOH . M 6 HOH AA 19 1519 24 HOH HOH . M 6 HOH AA 20 1520 19 HOH HOH . M 6 HOH AA 21 1521 10 HOH HOH . M 6 HOH AA 22 1522 17 HOH HOH . M 6 HOH AA 23 1523 18 HOH HOH . M 6 HOH AA 24 1524 33 HOH HOH . M 6 HOH AA 25 1525 22 HOH HOH . M 6 HOH AA 26 1526 14 HOH HOH . M 6 HOH AA 27 1527 37 HOH HOH . M 6 HOH AA 28 1528 43 HOH HOH . M 6 HOH AA 29 1529 12 HOH HOH . M 6 HOH AA 30 1530 47 HOH HOH . M 6 HOH AA 31 1531 31 HOH HOH . M 6 HOH AA 32 1532 46 HOH HOH . M 6 HOH AA 33 1533 44 HOH HOH . M 6 HOH AA 34 1534 23 HOH HOH . M 6 HOH AA 35 1535 29 HOH HOH . M 6 HOH AA 36 1536 25 HOH HOH . M 6 HOH AA 37 1537 32 HOH HOH . M 6 HOH AA 38 1538 26 HOH HOH . M 6 HOH AA 39 1539 42 HOH HOH . M 6 HOH AA 40 1540 48 HOH HOH . M 6 HOH AA 41 1541 15 HOH HOH . M 6 HOH AA 42 1542 35 HOH HOH . M 6 HOH AA 43 1543 45 HOH HOH . M 6 HOH AA 44 1544 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . J 4 26 -14.869 38.39 1 55.79 ? C1 GOL 1409 AA 1 HETATM 2 O O1 GOL . . . J 4 26.898 -13.834 38.644 1 61.52 ? O1 GOL 1409 AA 1 HETATM 3 C C2 GOL . . . J 4 26.802 -16.013 37.757 1 62.98 ? C2 GOL 1409 AA 1 HETATM 4 O O2 GOL . . . J 4 26.24 -17.249 38.055 1 71.19 ? O2 GOL 1409 AA 1 HETATM 5 C C3 GOL . . . J 4 26.776 -15.71 36.261 1 72.75 ? C3 GOL 1409 AA 1 HETATM 6 O O3 GOL . . . J 4 27.296 -14.411 36.088 1 62.87 ? O3 GOL 1409 AA 1 HETATM 7 H H11 GOL . . . J 4 25.287 -14.606 37.788 1 67.26 ? H11 GOL 1409 AA 1 HETATM 8 H H12 GOL . . . J 4 25.564 -15.19 39.195 1 67.26 ? H12 GOL 1409 AA 1 HETATM 9 H HO1 GOL . . . J 4 26.734 -13.226 38.065 1 74.13 ? HO1 GOL 1409 AA 1 HETATM 10 H H2 GOL . . . J 4 27.711 -16.039 38.094 1 75.88 ? H2 GOL 1409 AA 1 HETATM 11 H HO2 GOL . . . J 4 26.673 -17.587 38.704 1 85.73 ? HO2 GOL 1409 AA 1 HETATM 12 H H31 GOL . . . J 4 25.866 -15.805 35.939 1 87.6 ? H31 GOL 1409 AA 1 HETATM 13 H H32 GOL . . . J 4 27.285 -16.392 35.795 1 87.6 ? H32 GOL 1409 AA 1 HETATM 14 H HO3 GOL . . . J 4 26.856 -14.053 35.446 1 75.75 ? HO3 GOL 1409 AA 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #