data_7BBT # _model_server_result.job_id 4aZM0F9FJ0iI5ZO3_io2mA _model_server_result.datetime_utc '2024-12-26 21:12:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bbt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":201}' # _entry.id 7BBT # _exptl.entry_id 7BBT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.93 _cell.angle_gamma 90 _cell.entry_id 7BBT _cell.length_a 120.851 _cell.length_b 70.215 _cell.length_c 70.175 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BBT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 19 A CYS 14 1_555 E CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? covale ? covale2 A SG CYS 22 A CYS 17 1_555 E CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? covale ? covale3 B SG CYS 19 B CYS 14 1_555 F CAB HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale4 B SG CYS 22 B CYS 17 1_555 F CAC HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? covale ? covale5 C SG CYS 19 C CYS 14 1_555 G CAB HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.818 ? covale ? covale6 C SG CYS 22 C CYS 17 1_555 G CAC HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? covale ? covale7 D SG CYS 19 D CYS 14 1_555 J CAB HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? covale ? covale8 D SG CYS 22 D CYS 17 1_555 J CAC HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? metalc ? metalc1 A NE2 HIS 23 A HIS 18 1_555 E FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? metalc ? metalc2 A SD MET 85 A MET 80 1_555 E FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc3 B NE2 HIS 23 B HIS 18 1_555 F FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc4 B SD MET 85 B MET 80 1_555 F FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc5 C NE2 HIS 23 C HIS 18 1_555 G FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc6 C SD MET 85 C MET 80 1_555 G FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc7 D NE2 HIS 23 D HIS 18 1_555 J FE HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc8 D SD MET 85 D MET 80 1_555 J FE HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 372 n n FE NB HEC sing 373 n n FE NC HEC sing 374 n n FE ND HEC sing 375 n n CHA C1A HEC doub 376 n n CHA C4D HEC sing 377 n n CHA HHA HEC sing 378 n n CHB C4A HEC doub 379 n n CHB C1B HEC sing 380 n n CHB HHB HEC sing 381 n n CHC C4B HEC doub 382 n n CHC C1C HEC sing 383 n n CHC HHC HEC sing 384 n n CHD C4C HEC doub 385 n n CHD C1D HEC sing 386 n n CHD HHD HEC sing 387 n n NA C1A HEC sing 388 n y NA C4A HEC sing 389 n y C1A C2A HEC sing 390 n y C2A C3A HEC doub 391 n y C2A CAA HEC sing 392 n n C3A C4A HEC sing 393 n y C3A CMA HEC sing 394 n n CMA HMA1 HEC sing 395 n n CMA HMA2 HEC sing 396 n n CMA HMA3 HEC sing 397 n n CAA CBA HEC sing 398 n n CAA HAA1 HEC sing 399 n n CAA HAA2 HEC sing 400 n n CBA CGA HEC sing 401 n n CBA HBA1 HEC sing 402 n n CBA HBA2 HEC sing 403 n n CGA O1A HEC doub 404 n n CGA O2A HEC sing 405 n n O2A H2A HEC sing 406 n n NB C1B HEC sing 407 n y NB C4B HEC sing 408 n y C1B C2B HEC doub 409 n y C2B C3B HEC sing 410 n y C2B CMB HEC sing 411 n n C3B C4B HEC sing 412 n y C3B CAB HEC doub 413 e n CMB HMB1 HEC sing 414 n n CMB HMB2 HEC sing 415 n n CMB HMB3 HEC sing 416 n n CAB CBB HEC sing 417 n n CAB HAB HEC sing 418 n n CBB HBB1 HEC sing 419 n n CBB HBB2 HEC sing 420 n n CBB HBB3 HEC sing 421 n n NC C1C HEC sing 422 n y NC C4C HEC sing 423 n y C1C C2C HEC doub 424 n y C2C C3C HEC sing 425 n y C2C CMC HEC sing 426 n n C3C C4C HEC sing 427 n y C3C CAC HEC doub 428 e n CMC HMC1 HEC sing 429 n n CMC HMC2 HEC sing 430 n n CMC HMC3 HEC sing 431 n n CAC CBC HEC sing 432 n n CAC HAC HEC sing 433 n n CBC HBC1 HEC sing 434 n n CBC HBC2 HEC sing 435 n n CBC HBC3 HEC sing 436 n n ND C1D HEC sing 437 n y ND C4D HEC sing 438 n y C1D C2D HEC doub 439 n y C2D C3D HEC sing 440 n y C2D CMD HEC sing 441 n n C3D C4D HEC doub 442 n y C3D CAD HEC sing 443 n n CMD HMD1 HEC sing 444 n n CMD HMD2 HEC sing 445 n n CMD HMD3 HEC sing 446 n n CAD CBD HEC sing 447 n n CAD HAD1 HEC sing 448 n n CAD HAD2 HEC sing 449 n n CBD CGD HEC sing 450 n n CBD HBD1 HEC sing 451 n n CBD HBD2 HEC sing 452 n n CGD O1D HEC doub 453 n n CGD O2D HEC sing 454 n n O2D H2D HEC sing 455 n n # _atom_sites.entry_id 7BBT _atom_sites.fract_transf_matrix[1][1] 0.008275 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0019 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014621 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HEC A 1 201 201 HEC HEC . F 2 HEC B 1 201 201 HEC HEC . G 2 HEC C 1 201 201 HEC HEC . H 3 T8W C 1 202 301 T8W 6VE . I 3 T8W C 1 203 401 T8W 6VE . J 2 HEC D 1 201 201 HEC HEC . K 3 T8W D 1 202 501 T8W 6VE . L 4 15P D 1 203 601 15P 15P . M 5 HOH A 1 301 15 HOH HOH . M 5 HOH A 2 302 27 HOH HOH . M 5 HOH A 3 303 19 HOH HOH . M 5 HOH A 4 304 28 HOH HOH . M 5 HOH A 5 305 25 HOH HOH . M 5 HOH A 6 306 29 HOH HOH . M 5 HOH A 7 307 9 HOH HOH . M 5 HOH A 8 308 33 HOH HOH . M 5 HOH A 9 309 4 HOH HOH . M 5 HOH A 10 310 23 HOH HOH . M 5 HOH A 11 311 18 HOH HOH . M 5 HOH A 12 312 3 HOH HOH . N 5 HOH B 1 301 36 HOH HOH . N 5 HOH B 2 302 32 HOH HOH . N 5 HOH B 3 303 17 HOH HOH . N 5 HOH B 4 304 34 HOH HOH . O 5 HOH C 1 301 22 HOH HOH . O 5 HOH C 2 302 31 HOH HOH . O 5 HOH C 3 303 30 HOH HOH . O 5 HOH C 4 304 1 HOH HOH . O 5 HOH C 5 305 7 HOH HOH . O 5 HOH C 6 306 12 HOH HOH . O 5 HOH C 7 307 40 HOH HOH . O 5 HOH C 8 308 37 HOH HOH . O 5 HOH C 9 309 2 HOH HOH . O 5 HOH C 10 310 11 HOH HOH . O 5 HOH C 11 311 14 HOH HOH . O 5 HOH C 12 312 21 HOH HOH . O 5 HOH C 13 313 35 HOH HOH . O 5 HOH C 14 314 16 HOH HOH . O 5 HOH C 15 315 41 HOH HOH . P 5 HOH D 1 301 6 HOH HOH . P 5 HOH D 2 302 38 HOH HOH . P 5 HOH D 3 303 8 HOH HOH . P 5 HOH D 4 304 20 HOH HOH . P 5 HOH D 5 305 24 HOH HOH . P 5 HOH D 6 306 39 HOH HOH . P 5 HOH D 7 307 5 HOH HOH . P 5 HOH D 8 308 26 HOH HOH . P 5 HOH D 9 309 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . J 2 16.427 54.815 22 1 87.27 ? FE HEC 201 D 1 HETATM 2 C CHA HEC . . . J 2 16.644 52.836 24.788 1 87.47 ? CHA HEC 201 D 1 HETATM 3 C CHB HEC . . . J 2 13.11 55.277 22.59 1 87 ? CHB HEC 201 D 1 HETATM 4 C CHC HEC . . . J 2 16.195 56.788 19.193 1 87.04 ? CHC HEC 201 D 1 HETATM 5 C CHD HEC . . . J 2 19.491 53.722 20.971 1 87.69 ? CHD HEC 201 D 1 HETATM 6 N NA HEC . . . J 2 15.104 54.116 23.379 1 87.29 ? NA HEC 201 D 1 HETATM 7 C C1A HEC . . . J 2 15.428 53.423 24.534 1 87.36 ? C1A HEC 201 D 1 HETATM 8 C C2A HEC . . . J 2 14.28 53.385 25.432 1 87.34 ? C2A HEC 201 D 1 HETATM 9 C C3A HEC . . . J 2 13.271 54.063 24.801 1 87.17 ? C3A HEC 201 D 1 HETATM 10 C C4A HEC . . . J 2 13.813 54.511 23.529 1 87.21 ? C4A HEC 201 D 1 HETATM 11 C CMA HEC . . . J 2 11.866 54.282 25.281 1 86.93 ? CMA HEC 201 D 1 HETATM 12 C CAA HEC . . . J 2 14.19 52.727 26.784 1 87.43 ? CAA HEC 201 D 1 HETATM 13 C CBA HEC . . . J 2 13.653 51.307 26.701 1 87.44 ? CBA HEC 201 D 1 HETATM 14 C CGA HEC . . . J 2 13.582 50.575 28.027 1 87.51 ? CGA HEC 201 D 1 HETATM 15 O O1A HEC . . . J 2 12.97 49.478 28.054 1 87.54 ? O1A HEC 201 D 1 HETATM 16 O O2A HEC . . . J 2 14.154 51.081 29.018 1 87.57 ? O2A HEC 201 D 1 HETATM 17 N NB HEC . . . J 2 14.913 55.806 21.033 1 86.91 ? NB HEC 201 D 1 HETATM 18 C C1B HEC . . . J 2 13.606 55.882 21.456 1 86.76 ? C1B HEC 201 D 1 HETATM 19 C C2B HEC . . . J 2 12.847 56.749 20.574 1 86.39 ? C2B HEC 201 D 1 HETATM 20 C C3B HEC . . . J 2 13.714 57.204 19.65 1 86.07 ? C3B HEC 201 D 1 HETATM 21 C C4B HEC . . . J 2 15.019 56.598 19.933 1 86.69 ? C4B HEC 201 D 1 HETATM 22 C CMB HEC . . . J 2 11.364 56.969 20.682 1 86.39 ? CMB HEC 201 D 1 HETATM 23 C CAB HEC . . . J 2 13.529 58.155 18.531 1 85.09 ? CAB HEC 201 D 1 HETATM 24 C CBB HEC . . . J 2 13.071 59.559 18.935 1 85.12 ? CBB HEC 201 D 1 HETATM 25 N NC HEC . . . J 2 17.615 55.185 20.377 1 87.31 ? NC HEC 201 D 1 HETATM 26 C C1C HEC . . . J 2 17.385 56.105 19.37 1 87.25 ? C1C HEC 201 D 1 HETATM 27 C C2C HEC . . . J 2 18.537 56.147 18.477 1 87.31 ? C2C HEC 201 D 1 HETATM 28 C C3C HEC . . . J 2 19.41 55.229 18.947 1 87.11 ? C3C HEC 201 D 1 HETATM 29 C C4C HEC . . . J 2 18.843 54.657 20.144 1 87.39 ? C4C HEC 201 D 1 HETATM 30 C CMC HEC . . . J 2 18.686 57.096 17.333 1 87.36 ? CMC HEC 201 D 1 HETATM 31 C CAC HEC . . . J 2 20.628 54.633 18.351 1 86.49 ? CAC HEC 201 D 1 HETATM 32 C CBC HEC . . . J 2 21.805 55.574 18.1 1 86.65 ? CBC HEC 201 D 1 HETATM 33 N ND HEC . . . J 2 17.782 53.434 22.684 1 87.64 ? ND HEC 201 D 1 HETATM 34 C C1D HEC . . . J 2 19.038 53.214 22.164 1 87.8 ? C1D HEC 201 D 1 HETATM 35 C C2D HEC . . . J 2 19.843 52.461 23.1 1 87.86 ? C2D HEC 201 D 1 HETATM 36 C C3D HEC . . . J 2 19.045 52.238 24.197 1 87.9 ? C3D HEC 201 D 1 HETATM 37 C C4D HEC . . . J 2 17.76 52.85 23.912 1 87.72 ? C4D HEC 201 D 1 HETATM 38 C CMD HEC . . . J 2 21.27 52.067 22.899 1 87.79 ? CMD HEC 201 D 1 HETATM 39 C CAD HEC . . . J 2 19.476 51.55 25.466 1 87.89 ? CAD HEC 201 D 1 HETATM 40 C CBD HEC . . . J 2 19.595 52.521 26.623 1 87.77 ? CBD HEC 201 D 1 HETATM 41 C CGD HEC . . . J 2 20.424 52.034 27.792 1 87.72 ? CGD HEC 201 D 1 HETATM 42 O O1D HEC . . . J 2 20.276 50.858 28.173 1 87.52 ? O1D HEC 201 D 1 HETATM 43 O O2D HEC . . . J 2 21.222 52.851 28.308 1 87.88 ? O2D HEC 201 D 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #