data_7BCP # _model_server_result.job_id RhfZOLccoRJ6Isj4A5rWmg _model_server_result.datetime_utc '2024-11-08 12:00:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bcp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7BCP # _exptl.entry_id 7BCP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 196.155 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'D-gluconic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BCP _cell.length_a 57.931 _cell.length_b 62.312 _cell.length_c 98.193 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BCP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H12 O7' _chem_comp.formula_weight 196.155 _chem_comp.id GCO _chem_comp.mon_nstd_flag . _chem_comp.name 'D-gluconic acid' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'GLUCONIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GCO sing 70 n n C1 O1A GCO doub 71 n n C1 O1B GCO sing 72 n n C2 C3 GCO sing 73 n n C2 O2 GCO sing 74 n n C2 H2 GCO sing 75 n n C3 C4 GCO sing 76 n n C3 O3 GCO sing 77 n n C3 H3 GCO sing 78 n n C4 C5 GCO sing 79 n n C4 O4 GCO sing 80 n n C4 H4 GCO sing 81 n n C5 C6 GCO sing 82 n n C5 O5 GCO sing 83 n n C5 H5 GCO sing 84 n n C6 O6 GCO sing 85 n n C6 H61 GCO sing 86 n n C6 H62 GCO sing 87 n n O1B HO1B GCO sing 88 n n O2 HO2 GCO sing 89 n n O3 HO3 GCO sing 90 n n O4 HO4 GCO sing 91 n n O5 HO5 GCO sing 92 n n O6 HO6 GCO sing 93 n n # _atom_sites.entry_id 7BCP _atom_sites.fract_transf_matrix[1][1] 0.017262 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016048 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010184 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GCO A 1 401 1 GCO LIG . C 3 HOH A 1 501 135 HOH HOH . C 3 HOH A 2 502 116 HOH HOH . C 3 HOH A 3 503 61 HOH HOH . C 3 HOH A 4 504 227 HOH HOH . C 3 HOH A 5 505 49 HOH HOH . C 3 HOH A 6 506 239 HOH HOH . C 3 HOH A 7 507 187 HOH HOH . C 3 HOH A 8 508 120 HOH HOH . C 3 HOH A 9 509 12 HOH HOH . C 3 HOH A 10 510 110 HOH HOH . C 3 HOH A 11 511 244 HOH HOH . C 3 HOH A 12 512 211 HOH HOH . C 3 HOH A 13 513 34 HOH HOH . C 3 HOH A 14 514 82 HOH HOH . C 3 HOH A 15 515 220 HOH HOH . C 3 HOH A 16 516 164 HOH HOH . C 3 HOH A 17 517 104 HOH HOH . C 3 HOH A 18 518 161 HOH HOH . C 3 HOH A 19 519 231 HOH HOH . C 3 HOH A 20 520 93 HOH HOH . C 3 HOH A 21 521 122 HOH HOH . C 3 HOH A 22 522 200 HOH HOH . C 3 HOH A 23 523 180 HOH HOH . C 3 HOH A 24 524 153 HOH HOH . C 3 HOH A 25 525 192 HOH HOH . C 3 HOH A 26 526 88 HOH HOH . C 3 HOH A 27 527 69 HOH HOH . C 3 HOH A 28 528 149 HOH HOH . C 3 HOH A 29 529 206 HOH HOH . C 3 HOH A 30 530 36 HOH HOH . C 3 HOH A 31 531 225 HOH HOH . C 3 HOH A 32 532 32 HOH HOH . C 3 HOH A 33 533 140 HOH HOH . C 3 HOH A 34 534 86 HOH HOH . C 3 HOH A 35 535 182 HOH HOH . C 3 HOH A 36 536 167 HOH HOH . C 3 HOH A 37 537 58 HOH HOH . C 3 HOH A 38 538 155 HOH HOH . C 3 HOH A 39 539 111 HOH HOH . C 3 HOH A 40 540 28 HOH HOH . C 3 HOH A 41 541 79 HOH HOH . C 3 HOH A 42 542 38 HOH HOH . C 3 HOH A 43 543 4 HOH HOH . C 3 HOH A 44 544 35 HOH HOH . C 3 HOH A 45 545 16 HOH HOH . C 3 HOH A 46 546 191 HOH HOH . C 3 HOH A 47 547 8 HOH HOH . C 3 HOH A 48 548 100 HOH HOH . C 3 HOH A 49 549 172 HOH HOH . C 3 HOH A 50 550 62 HOH HOH . C 3 HOH A 51 551 50 HOH HOH . C 3 HOH A 52 552 101 HOH HOH . C 3 HOH A 53 553 217 HOH HOH . C 3 HOH A 54 554 199 HOH HOH . C 3 HOH A 55 555 107 HOH HOH . C 3 HOH A 56 556 66 HOH HOH . C 3 HOH A 57 557 18 HOH HOH . C 3 HOH A 58 558 94 HOH HOH . C 3 HOH A 59 559 98 HOH HOH . C 3 HOH A 60 560 248 HOH HOH . C 3 HOH A 61 561 123 HOH HOH . C 3 HOH A 62 562 87 HOH HOH . C 3 HOH A 63 563 57 HOH HOH . C 3 HOH A 64 564 71 HOH HOH . C 3 HOH A 65 565 189 HOH HOH . C 3 HOH A 66 566 127 HOH HOH . C 3 HOH A 67 567 148 HOH HOH . C 3 HOH A 68 568 19 HOH HOH . C 3 HOH A 69 569 1 HOH HOH . C 3 HOH A 70 570 73 HOH HOH . C 3 HOH A 71 571 96 HOH HOH . C 3 HOH A 72 572 118 HOH HOH . C 3 HOH A 73 573 11 HOH HOH . C 3 HOH A 74 574 3 HOH HOH . C 3 HOH A 75 575 56 HOH HOH . C 3 HOH A 76 576 147 HOH HOH . C 3 HOH A 77 577 184 HOH HOH . C 3 HOH A 78 578 74 HOH HOH . C 3 HOH A 79 579 55 HOH HOH . C 3 HOH A 80 580 130 HOH HOH . C 3 HOH A 81 581 230 HOH HOH . C 3 HOH A 82 582 212 HOH HOH . C 3 HOH A 83 583 234 HOH HOH . C 3 HOH A 84 584 24 HOH HOH . C 3 HOH A 85 585 105 HOH HOH . C 3 HOH A 86 586 6 HOH HOH . C 3 HOH A 87 587 84 HOH HOH . C 3 HOH A 88 588 102 HOH HOH . C 3 HOH A 89 589 90 HOH HOH . C 3 HOH A 90 590 183 HOH HOH . C 3 HOH A 91 591 170 HOH HOH . C 3 HOH A 92 592 171 HOH HOH . C 3 HOH A 93 593 114 HOH HOH . C 3 HOH A 94 594 13 HOH HOH . C 3 HOH A 95 595 64 HOH HOH . C 3 HOH A 96 596 44 HOH HOH . C 3 HOH A 97 597 237 HOH HOH . C 3 HOH A 98 598 124 HOH HOH . C 3 HOH A 99 599 15 HOH HOH . C 3 HOH A 100 600 229 HOH HOH . C 3 HOH A 101 601 48 HOH HOH . C 3 HOH A 102 602 215 HOH HOH . C 3 HOH A 103 603 139 HOH HOH . C 3 HOH A 104 604 51 HOH HOH . C 3 HOH A 105 605 2 HOH HOH . C 3 HOH A 106 606 213 HOH HOH . C 3 HOH A 107 607 43 HOH HOH . C 3 HOH A 108 608 10 HOH HOH . C 3 HOH A 109 609 54 HOH HOH . C 3 HOH A 110 610 17 HOH HOH . C 3 HOH A 111 611 9 HOH HOH . C 3 HOH A 112 612 163 HOH HOH . C 3 HOH A 113 613 33 HOH HOH . C 3 HOH A 114 614 232 HOH HOH . C 3 HOH A 115 615 26 HOH HOH . C 3 HOH A 116 616 89 HOH HOH . C 3 HOH A 117 617 128 HOH HOH . C 3 HOH A 118 618 76 HOH HOH . C 3 HOH A 119 619 23 HOH HOH . C 3 HOH A 120 620 131 HOH HOH . C 3 HOH A 121 621 80 HOH HOH . C 3 HOH A 122 622 207 HOH HOH . C 3 HOH A 123 623 117 HOH HOH . C 3 HOH A 124 624 223 HOH HOH . C 3 HOH A 125 625 242 HOH HOH . C 3 HOH A 126 626 29 HOH HOH . C 3 HOH A 127 627 129 HOH HOH . C 3 HOH A 128 628 5 HOH HOH . C 3 HOH A 129 629 40 HOH HOH . C 3 HOH A 130 630 154 HOH HOH . C 3 HOH A 131 631 197 HOH HOH . C 3 HOH A 132 632 45 HOH HOH . C 3 HOH A 133 633 83 HOH HOH . C 3 HOH A 134 634 166 HOH HOH . C 3 HOH A 135 635 169 HOH HOH . C 3 HOH A 136 636 144 HOH HOH . C 3 HOH A 137 637 22 HOH HOH . C 3 HOH A 138 638 142 HOH HOH . C 3 HOH A 139 639 158 HOH HOH . C 3 HOH A 140 640 46 HOH HOH . C 3 HOH A 141 641 193 HOH HOH . C 3 HOH A 142 642 137 HOH HOH . C 3 HOH A 143 643 59 HOH HOH . C 3 HOH A 144 644 174 HOH HOH . C 3 HOH A 145 645 81 HOH HOH . C 3 HOH A 146 646 30 HOH HOH . C 3 HOH A 147 647 138 HOH HOH . C 3 HOH A 148 648 85 HOH HOH . C 3 HOH A 149 649 14 HOH HOH . C 3 HOH A 150 650 99 HOH HOH . C 3 HOH A 151 651 31 HOH HOH . C 3 HOH A 152 652 7 HOH HOH . C 3 HOH A 153 653 37 HOH HOH . C 3 HOH A 154 654 39 HOH HOH . C 3 HOH A 155 655 143 HOH HOH . C 3 HOH A 156 656 243 HOH HOH . C 3 HOH A 157 657 177 HOH HOH . C 3 HOH A 158 658 47 HOH HOH . C 3 HOH A 159 659 20 HOH HOH . C 3 HOH A 160 660 168 HOH HOH . C 3 HOH A 161 661 224 HOH HOH . C 3 HOH A 162 662 162 HOH HOH . C 3 HOH A 163 663 65 HOH HOH . C 3 HOH A 164 664 188 HOH HOH . C 3 HOH A 165 665 42 HOH HOH . C 3 HOH A 166 666 126 HOH HOH . C 3 HOH A 167 667 25 HOH HOH . C 3 HOH A 168 668 190 HOH HOH . C 3 HOH A 169 669 221 HOH HOH . C 3 HOH A 170 670 132 HOH HOH . C 3 HOH A 171 671 60 HOH HOH . C 3 HOH A 172 672 245 HOH HOH . C 3 HOH A 173 673 113 HOH HOH . C 3 HOH A 174 674 136 HOH HOH . C 3 HOH A 175 675 77 HOH HOH . C 3 HOH A 176 676 63 HOH HOH . C 3 HOH A 177 677 21 HOH HOH . C 3 HOH A 178 678 157 HOH HOH . C 3 HOH A 179 679 218 HOH HOH . C 3 HOH A 180 680 236 HOH HOH . C 3 HOH A 181 681 115 HOH HOH . C 3 HOH A 182 682 152 HOH HOH . C 3 HOH A 183 683 226 HOH HOH . C 3 HOH A 184 684 222 HOH HOH . C 3 HOH A 185 685 146 HOH HOH . C 3 HOH A 186 686 210 HOH HOH . C 3 HOH A 187 687 41 HOH HOH . C 3 HOH A 188 688 216 HOH HOH . C 3 HOH A 189 689 121 HOH HOH . C 3 HOH A 190 690 68 HOH HOH . C 3 HOH A 191 691 119 HOH HOH . C 3 HOH A 192 692 195 HOH HOH . C 3 HOH A 193 693 125 HOH HOH . C 3 HOH A 194 694 165 HOH HOH . C 3 HOH A 195 695 181 HOH HOH . C 3 HOH A 196 696 159 HOH HOH . C 3 HOH A 197 697 214 HOH HOH . C 3 HOH A 198 698 202 HOH HOH . C 3 HOH A 199 699 196 HOH HOH . C 3 HOH A 200 700 238 HOH HOH . C 3 HOH A 201 701 97 HOH HOH . C 3 HOH A 202 702 52 HOH HOH . C 3 HOH A 203 703 203 HOH HOH . C 3 HOH A 204 704 179 HOH HOH . C 3 HOH A 205 705 145 HOH HOH . C 3 HOH A 206 706 194 HOH HOH . C 3 HOH A 207 707 186 HOH HOH . C 3 HOH A 208 708 246 HOH HOH . C 3 HOH A 209 709 133 HOH HOH . C 3 HOH A 210 710 247 HOH HOH . C 3 HOH A 211 711 27 HOH HOH . C 3 HOH A 212 712 150 HOH HOH . C 3 HOH A 213 713 103 HOH HOH . C 3 HOH A 214 714 205 HOH HOH . C 3 HOH A 215 715 185 HOH HOH . C 3 HOH A 216 716 156 HOH HOH . C 3 HOH A 217 717 176 HOH HOH . C 3 HOH A 218 718 241 HOH HOH . C 3 HOH A 219 719 178 HOH HOH . C 3 HOH A 220 720 95 HOH HOH . C 3 HOH A 221 721 240 HOH HOH . C 3 HOH A 222 722 70 HOH HOH . C 3 HOH A 223 723 201 HOH HOH . C 3 HOH A 224 724 219 HOH HOH . C 3 HOH A 225 725 92 HOH HOH . C 3 HOH A 226 726 249 HOH HOH . C 3 HOH A 227 727 151 HOH HOH . C 3 HOH A 228 728 173 HOH HOH . C 3 HOH A 229 729 235 HOH HOH . C 3 HOH A 230 730 175 HOH HOH . C 3 HOH A 231 731 112 HOH HOH . C 3 HOH A 232 732 53 HOH HOH . C 3 HOH A 233 733 228 HOH HOH . C 3 HOH A 234 734 160 HOH HOH . C 3 HOH A 235 735 106 HOH HOH . C 3 HOH A 236 736 78 HOH HOH . C 3 HOH A 237 737 109 HOH HOH . C 3 HOH A 238 738 209 HOH HOH . C 3 HOH A 239 739 72 HOH HOH . C 3 HOH A 240 740 233 HOH HOH . C 3 HOH A 241 741 204 HOH HOH . C 3 HOH A 242 742 208 HOH HOH . C 3 HOH A 243 743 134 HOH HOH . C 3 HOH A 244 744 141 HOH HOH . C 3 HOH A 245 745 75 HOH HOH . C 3 HOH A 246 746 67 HOH HOH . C 3 HOH A 247 747 91 HOH HOH . C 3 HOH A 248 748 198 HOH HOH . C 3 HOH A 249 749 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GCO . . . B 2 -22.098 2.797 -2.874 1 20.6 ? C1 GCO 401 A 1 HETATM 2 C C2 GCO . . . B 2 -21.511 3.393 -4.145 1 20.09 ? C2 GCO 401 A 1 HETATM 3 C C3 GCO . . . B 2 -20.112 4.003 -4.033 1 21.83 ? C3 GCO 401 A 1 HETATM 4 C C4 GCO . . . B 2 -20.322 5.393 -3.418 1 21.61 ? C4 GCO 401 A 1 HETATM 5 C C5 GCO . . . B 2 -18.966 6.04 -3.156 1 21.35 ? C5 GCO 401 A 1 HETATM 6 C C6 GCO . . . B 2 -18.461 6.642 -4.458 1 18.09 ? C6 GCO 401 A 1 HETATM 7 O O1A GCO . . . B 2 -22.043 1.539 -2.692 1 21.04 ? O1A GCO 401 A 1 HETATM 8 O O1B GCO . . . B 2 -22.629 3.547 -2.025 1 20.56 ? O1B GCO 401 A 1 HETATM 9 O O2 GCO . . . B 2 -21.517 2.287 -5.038 1 21.28 ? O2 GCO 401 A 1 HETATM 10 O O3 GCO . . . B 2 -19.629 4.073 -5.346 1 20.37 ? O3 GCO 401 A 1 HETATM 11 O O4 GCO . . . B 2 -21.169 6.197 -4.23 1 22.55 ? O4 GCO 401 A 1 HETATM 12 O O5 GCO . . . B 2 -19.076 7.133 -2.241 1 18.43 ? O5 GCO 401 A 1 HETATM 13 O O6 GCO . . . B 2 -17.182 7.169 -4.162 1 22.35 ? O6 GCO 401 A 1 HETATM 14 H H2 GCO . . . B 2 -22.033 4.161 -4.424 1 24.11 ? H2 GCO 401 A 1 HETATM 15 H H3 GCO . . . B 2 -19.481 3.505 -3.489 1 26.19 ? H3 GCO 401 A 1 HETATM 16 H H4 GCO . . . B 2 -20.781 5.305 -2.567 1 25.93 ? H4 GCO 401 A 1 HETATM 17 H H5 GCO . . . B 2 -18.377 5.358 -2.798 1 25.61 ? H5 GCO 401 A 1 HETATM 18 H H61 GCO . . . B 2 -18.394 5.959 -5.143 1 21.7 ? H61 GCO 401 A 1 HETATM 19 H H62 GCO . . . B 2 -19.055 7.348 -4.757 1 21.7 ? H62 GCO 401 A 1 HETATM 20 H HO2 GCO . . . B 2 -22.065 2.377 -5.684 1 25.53 ? HO2 GCO 401 A 1 HETATM 21 H HO3 GCO . . . B 2 -19.228 3.351 -5.548 1 24.44 ? HO3 GCO 401 A 1 HETATM 22 H HO4 GCO . . . B 2 -21.923 6.334 -3.84 1 27.06 ? HO4 GCO 401 A 1 HETATM 23 H HO5 GCO . . . B 2 -18.893 6.876 -1.457 1 22.12 ? HO5 GCO 401 A 1 HETATM 24 H HO6 GCO . . . B 2 -16.712 7.248 -4.869 1 26.82 ? HO6 GCO 401 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #