data_7BDD
#
_model_server_result.job_id            BJGST0ZYlEwdauLUS9TuYw 
_model_server_result.datetime_utc      '2024-11-23 03:36:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bdd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":506}' 
#
_entry.id    7BDD 
#
_exptl.entry_id    7BDD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              242.27 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{R})-2-(4-phenylphenoxy)propanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7BDD 
_cell.length_a            59.8 
_cell.length_b            73.8 
_cell.length_c            78.71 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BDD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
disulf ? disulf4 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf5 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf6 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 C C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
#
_chem_comp.formula           'C15 H14 O3' 
_chem_comp.formula_weight    242.27 
_chem_comp.id                TE8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{R})-2-(4-phenylphenoxy)propanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C08 C09 TE8 doub 333 n y 
C08 C07 TE8 sing 334 n y 
C09 C10 TE8 sing 335 n y 
C14 C15 TE8 doub 336 n y 
C14 C13 TE8 sing 337 n y 
C15 C16 TE8 sing 338 n y 
O06 C07 TE8 sing 339 n n 
O06 C02 TE8 sing 340 n n 
C07 C12 TE8 doub 341 n y 
C10 C13 TE8 sing 342 n n 
C10 C11 TE8 doub 343 n y 
C13 C18 TE8 doub 344 n y 
O04 C03 TE8 doub 345 n n 
C16 C17 TE8 doub 346 n y 
C02 C03 TE8 sing 347 n n 
C02 C01 TE8 sing 348 n n 
C03 O05 TE8 sing 349 n n 
C18 C17 TE8 sing 350 n y 
C12 C11 TE8 sing 351 n y 
C15 H1 TE8 sing 352 n n 
C17 H2 TE8 sing 353 n n 
C01 H3 TE8 sing 354 n n 
C01 H4 TE8 sing 355 n n 
C01 H5 TE8 sing 356 n n 
C02 H6 TE8 sing 357 n n 
C08 H7 TE8 sing 358 n n 
C09 H8 TE8 sing 359 n n 
C11 H9 TE8 sing 360 n n 
C12 H10 TE8 sing 361 n n 
C14 H11 TE8 sing 362 n n 
C16 H12 TE8 sing 363 n n 
C18 H13 TE8 sing 364 n n 
O05 H14 TE8 sing 365 n n 
#
_atom_sites.entry_id                     7BDD 
_atom_sites.fract_transf_matrix[1][1]    0.016722 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01355 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012705 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 501 602 SO4 SO4 . 
C 3 NAG A 1 502 1452 NAG NAG . 
D 4 DMS A 1 503 1501 DMS DMS . 
E 2 SO4 A 1 504 8 SO4 SO4 . 
F 2 SO4 A 1 505 10 SO4 SO4 . 
G 5 TE8 A 1 506 1 TE8 LIG . 
H 6 HOH A 1 601 1086 HOH HOH . 
H 6 HOH A 2 602 36 HOH HOH . 
H 6 HOH A 3 603 1050 HOH HOH . 
H 6 HOH A 4 604 1118 HOH HOH . 
H 6 HOH A 5 605 1031 HOH HOH . 
H 6 HOH A 6 606 1036 HOH HOH . 
H 6 HOH A 7 607 13 HOH HOH . 
H 6 HOH A 8 608 1003 HOH HOH . 
H 6 HOH A 9 609 1047 HOH HOH . 
H 6 HOH A 10 610 1070 HOH HOH . 
H 6 HOH A 11 611 1123 HOH HOH . 
H 6 HOH A 12 612 1196 HOH HOH . 
H 6 HOH A 13 613 1008 HOH HOH . 
H 6 HOH A 14 614 54 HOH HOH . 
H 6 HOH A 15 615 1081 HOH HOH . 
H 6 HOH A 16 616 1001 HOH HOH . 
H 6 HOH A 17 617 1045 HOH HOH . 
H 6 HOH A 18 618 23 HOH HOH . 
H 6 HOH A 19 619 1083 HOH HOH . 
H 6 HOH A 20 620 1046 HOH HOH . 
H 6 HOH A 21 621 1059 HOH HOH . 
H 6 HOH A 22 622 1082 HOH HOH . 
H 6 HOH A 23 623 1027 HOH HOH . 
H 6 HOH A 24 624 1018 HOH HOH . 
H 6 HOH A 25 625 1004 HOH HOH . 
H 6 HOH A 26 626 1033 HOH HOH . 
H 6 HOH A 27 627 1091 HOH HOH . 
H 6 HOH A 28 628 1029 HOH HOH . 
H 6 HOH A 29 629 1038 HOH HOH . 
H 6 HOH A 30 630 1048 HOH HOH . 
H 6 HOH A 31 631 1016 HOH HOH . 
H 6 HOH A 32 632 1019 HOH HOH . 
H 6 HOH A 33 633 1051 HOH HOH . 
H 6 HOH A 34 634 22 HOH HOH . 
H 6 HOH A 35 635 14 HOH HOH . 
H 6 HOH A 36 636 1064 HOH HOH . 
H 6 HOH A 37 637 1058 HOH HOH . 
H 6 HOH A 38 638 1040 HOH HOH . 
H 6 HOH A 39 639 1190 HOH HOH . 
H 6 HOH A 40 640 1043 HOH HOH . 
H 6 HOH A 41 641 1063 HOH HOH . 
H 6 HOH A 42 642 1007 HOH HOH . 
H 6 HOH A 43 643 1114 HOH HOH . 
H 6 HOH A 44 644 1002 HOH HOH . 
H 6 HOH A 45 645 1012 HOH HOH . 
H 6 HOH A 46 646 28 HOH HOH . 
H 6 HOH A 47 647 56 HOH HOH . 
H 6 HOH A 48 648 1052 HOH HOH . 
H 6 HOH A 49 649 1054 HOH HOH . 
H 6 HOH A 50 650 11 HOH HOH . 
H 6 HOH A 51 651 1073 HOH HOH . 
H 6 HOH A 52 652 12 HOH HOH . 
H 6 HOH A 53 653 1085 HOH HOH . 
H 6 HOH A 54 654 1065 HOH HOH . 
H 6 HOH A 55 655 1010 HOH HOH . 
H 6 HOH A 56 656 1106 HOH HOH . 
H 6 HOH A 57 657 1035 HOH HOH . 
H 6 HOH A 58 658 1149 HOH HOH . 
H 6 HOH A 59 659 1017 HOH HOH . 
H 6 HOH A 60 660 1125 HOH HOH . 
H 6 HOH A 61 661 1074 HOH HOH . 
H 6 HOH A 62 662 50 HOH HOH . 
H 6 HOH A 63 663 1098 HOH HOH . 
H 6 HOH A 64 664 7 HOH HOH . 
H 6 HOH A 65 665 29 HOH HOH . 
H 6 HOH A 66 666 1006 HOH HOH . 
H 6 HOH A 67 667 1015 HOH HOH . 
H 6 HOH A 68 668 1023 HOH HOH . 
H 6 HOH A 69 669 1041 HOH HOH . 
H 6 HOH A 70 670 1022 HOH HOH . 
H 6 HOH A 71 671 1039 HOH HOH . 
H 6 HOH A 72 672 1191 HOH HOH . 
H 6 HOH A 73 673 1037 HOH HOH . 
H 6 HOH A 74 674 1124 HOH HOH . 
H 6 HOH A 75 675 26 HOH HOH . 
H 6 HOH A 76 676 1030 HOH HOH . 
H 6 HOH A 77 677 1078 HOH HOH . 
H 6 HOH A 78 678 1026 HOH HOH . 
H 6 HOH A 79 679 1014 HOH HOH . 
H 6 HOH A 80 680 1068 HOH HOH . 
H 6 HOH A 81 681 1005 HOH HOH . 
H 6 HOH A 82 682 1020 HOH HOH . 
H 6 HOH A 83 683 1120 HOH HOH . 
H 6 HOH A 84 684 1062 HOH HOH . 
H 6 HOH A 85 685 1013 HOH HOH . 
H 6 HOH A 86 686 34 HOH HOH . 
H 6 HOH A 87 687 30 HOH HOH . 
H 6 HOH A 88 688 1080 HOH HOH . 
H 6 HOH A 89 689 35 HOH HOH . 
H 6 HOH A 90 690 1011 HOH HOH . 
H 6 HOH A 91 691 1042 HOH HOH . 
H 6 HOH A 92 692 4 HOH HOH . 
H 6 HOH A 93 693 1067 HOH HOH . 
H 6 HOH A 94 694 1140 HOH HOH . 
H 6 HOH A 95 695 1079 HOH HOH . 
H 6 HOH A 96 696 1049 HOH HOH . 
H 6 HOH A 97 697 1092 HOH HOH . 
H 6 HOH A 98 698 1142 HOH HOH . 
H 6 HOH A 99 699 1155 HOH HOH . 
H 6 HOH A 100 700 1153 HOH HOH . 
H 6 HOH A 101 701 42 HOH HOH . 
H 6 HOH A 102 702 1112 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 TE8 . . . G 5 2.696 -4.541 5.04 1 29.46 ? C10 TE8 506 A 1 
HETATM 2 C C13 TE8 . . . G 5 1.307 -4.602 5.112 1 27.75 ? C13 TE8 506 A 1 
HETATM 3 C C15 TE8 . . . G 5 -0.701 -5.753 4.4 1 28.06 ? C15 TE8 506 A 1 
HETATM 4 C C17 TE8 . . . G 5 -0.827 -3.957 5.999 1 30.31 ? C17 TE8 506 A 1 
HETATM 5 C C01 TE8 . . . G 5 8.169 -5.279 6.461 1 36.05 ? C01 TE8 506 A 1 
HETATM 6 C C02 TE8 . . . G 5 7.972 -4.336 5.291 1 28.3 ? C02 TE8 506 A 1 
HETATM 7 C C03 TE8 . . . G 5 8.089 -2.844 5.59 1 22.8 ? C03 TE8 506 A 1 
HETATM 8 C C07 TE8 . . . G 5 5.484 -4.565 4.797 1 24.77 ? C07 TE8 506 A 1 
HETATM 9 C C08 TE8 . . . G 5 4.665 -4.86 3.724 1 26.29 ? C08 TE8 506 A 1 
HETATM 10 C C09 TE8 . . . G 5 3.287 -4.849 3.833 1 26.4 ? C09 TE8 506 A 1 
HETATM 11 C C11 TE8 . . . G 5 3.507 -4.259 6.142 1 26.16 ? C11 TE8 506 A 1 
HETATM 12 C C12 TE8 . . . G 5 4.904 -4.255 6.027 1 25.92 ? C12 TE8 506 A 1 
HETATM 13 C C14 TE8 . . . G 5 0.675 -5.588 4.357 1 29.23 ? C14 TE8 506 A 1 
HETATM 14 C C16 TE8 . . . G 5 -1.45 -4.928 5.224 1 32.48 ? C16 TE8 506 A 1 
HETATM 15 C C18 TE8 . . . G 5 0.553 -3.802 5.956 1 30.65 ? C18 TE8 506 A 1 
HETATM 16 O O04 TE8 . . . G 5 7.205 -2.046 5.16 1 16.66 ? O04 TE8 506 A 1 
HETATM 17 O O05 TE8 . . . G 5 9.112 -2.417 6.197 1 27.76 -1 O05 TE8 506 A 1 
HETATM 18 O O06 TE8 . . . G 5 6.853 -4.637 4.489 1 28.61 ? O06 TE8 506 A 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           18 
#