data_7BDI
#
_model_server_result.job_id            i0_IJvJATEFBmIoIyTCn4w 
_model_server_result.datetime_utc      '2024-10-11 05:26:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bdi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":2204}' 
#
_entry.id    7BDI 
#
_exptl.entry_id    7BDI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7BDI 
_cell.length_a            99.729 
_cell.length_b            118.65 
_cell.length_c            187.202 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BDI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 226 B ASP 615 1_555 F MG MG . B MG 2204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.723 ? 
metalc ? metalc2 A OE1 GLU 227 B GLU 616 1_555 F MG MG . B MG 2204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
metalc ? metalc3 A OD1 ASP 1065 B ASP 1454 1_555 E MG MG . B MG 2203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
metalc ? metalc4 A OE2 GLU 1066 B GLU 1455 1_555 E MG MG . B MG 2203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? 
metalc ? metalc5 C O2G AGS . B AGS 2201 1_555 F MG MG . B MG 2204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? 
metalc ? metalc6 C O3G AGS . B AGS 2201 1_555 F MG MG . B MG 2204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
metalc ? metalc7 D O2G AGS . B AGS 2202 1_555 E MG MG . B MG 2203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc8 D O3G AGS . B AGS 2202 1_555 E MG MG . B MG 2203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7BDI 
_atom_sites.fract_transf_matrix[1][1]    0.010027 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008428 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005342 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 AGS B 1 2201 1 AGS AGS . 
D 3 AGS B 1 2202 1 AGS AGS . 
E 4 MG B 1 2203 1 MG MG . 
F 4 MG B 1 2204 1 MG MG . 
G 5 HOH B 1 2301 240 HOH HOH . 
G 5 HOH B 2 2302 284 HOH HOH . 
G 5 HOH B 3 2303 110 HOH HOH . 
G 5 HOH B 4 2304 311 HOH HOH . 
G 5 HOH B 5 2305 191 HOH HOH . 
G 5 HOH B 6 2306 88 HOH HOH . 
G 5 HOH B 7 2307 282 HOH HOH . 
G 5 HOH B 8 2308 6 HOH HOH . 
G 5 HOH B 9 2309 192 HOH HOH . 
G 5 HOH B 10 2310 145 HOH HOH . 
G 5 HOH B 11 2311 19 HOH HOH . 
G 5 HOH B 12 2312 265 HOH HOH . 
G 5 HOH B 13 2313 137 HOH HOH . 
G 5 HOH B 14 2314 238 HOH HOH . 
G 5 HOH B 15 2315 186 HOH HOH . 
G 5 HOH B 16 2316 227 HOH HOH . 
G 5 HOH B 17 2317 257 HOH HOH . 
G 5 HOH B 18 2318 210 HOH HOH . 
G 5 HOH B 19 2319 84 HOH HOH . 
G 5 HOH B 20 2320 148 HOH HOH . 
G 5 HOH B 21 2321 258 HOH HOH . 
G 5 HOH B 22 2322 111 HOH HOH . 
G 5 HOH B 23 2323 292 HOH HOH . 
G 5 HOH B 24 2324 103 HOH HOH . 
G 5 HOH B 25 2325 159 HOH HOH . 
G 5 HOH B 26 2326 211 HOH HOH . 
G 5 HOH B 27 2327 10 HOH HOH . 
G 5 HOH B 28 2328 267 HOH HOH . 
G 5 HOH B 29 2329 46 HOH HOH . 
G 5 HOH B 30 2330 58 HOH HOH . 
G 5 HOH B 31 2331 136 HOH HOH . 
G 5 HOH B 32 2332 38 HOH HOH . 
G 5 HOH B 33 2333 285 HOH HOH . 
G 5 HOH B 34 2334 146 HOH HOH . 
G 5 HOH B 35 2335 287 HOH HOH . 
G 5 HOH B 36 2336 204 HOH HOH . 
G 5 HOH B 37 2337 50 HOH HOH . 
G 5 HOH B 38 2338 280 HOH HOH . 
G 5 HOH B 39 2339 179 HOH HOH . 
G 5 HOH B 40 2340 45 HOH HOH . 
G 5 HOH B 41 2341 273 HOH HOH . 
G 5 HOH B 42 2342 1 HOH HOH . 
G 5 HOH B 43 2343 44 HOH HOH . 
G 5 HOH B 44 2344 279 HOH HOH . 
G 5 HOH B 45 2345 224 HOH HOH . 
G 5 HOH B 46 2346 290 HOH HOH . 
G 5 HOH B 47 2347 244 HOH HOH . 
G 5 HOH B 48 2348 91 HOH HOH . 
G 5 HOH B 49 2349 178 HOH HOH . 
G 5 HOH B 50 2350 259 HOH HOH . 
G 5 HOH B 51 2351 272 HOH HOH . 
G 5 HOH B 52 2352 72 HOH HOH . 
G 5 HOH B 53 2353 5 HOH HOH . 
G 5 HOH B 54 2354 261 HOH HOH . 
G 5 HOH B 55 2355 3 HOH HOH . 
G 5 HOH B 56 2356 78 HOH HOH . 
G 5 HOH B 57 2357 85 HOH HOH . 
G 5 HOH B 58 2358 100 HOH HOH . 
G 5 HOH B 59 2359 89 HOH HOH . 
G 5 HOH B 60 2360 8 HOH HOH . 
G 5 HOH B 61 2361 271 HOH HOH . 
G 5 HOH B 62 2362 31 HOH HOH . 
G 5 HOH B 63 2363 222 HOH HOH . 
G 5 HOH B 64 2364 232 HOH HOH . 
G 5 HOH B 65 2365 138 HOH HOH . 
G 5 HOH B 66 2366 60 HOH HOH . 
G 5 HOH B 67 2367 314 HOH HOH . 
G 5 HOH B 68 2368 206 HOH HOH . 
G 5 HOH B 69 2369 40 HOH HOH . 
G 5 HOH B 70 2370 312 HOH HOH . 
G 5 HOH B 71 2371 171 HOH HOH . 
G 5 HOH B 72 2372 101 HOH HOH . 
G 5 HOH B 73 2373 202 HOH HOH . 
G 5 HOH B 74 2374 143 HOH HOH . 
G 5 HOH B 75 2375 59 HOH HOH . 
G 5 HOH B 76 2376 247 HOH HOH . 
G 5 HOH B 77 2377 262 HOH HOH . 
G 5 HOH B 78 2378 217 HOH HOH . 
G 5 HOH B 79 2379 185 HOH HOH . 
G 5 HOH B 80 2380 49 HOH HOH . 
G 5 HOH B 81 2381 160 HOH HOH . 
G 5 HOH B 82 2382 170 HOH HOH . 
G 5 HOH B 83 2383 97 HOH HOH . 
G 5 HOH B 84 2384 18 HOH HOH . 
G 5 HOH B 85 2385 301 HOH HOH . 
G 5 HOH B 86 2386 268 HOH HOH . 
G 5 HOH B 87 2387 174 HOH HOH . 
G 5 HOH B 88 2388 288 HOH HOH . 
G 5 HOH B 89 2389 39 HOH HOH . 
G 5 HOH B 90 2390 173 HOH HOH . 
G 5 HOH B 91 2391 114 HOH HOH . 
G 5 HOH B 92 2392 176 HOH HOH . 
G 5 HOH B 93 2393 48 HOH HOH . 
G 5 HOH B 94 2394 163 HOH HOH . 
G 5 HOH B 95 2395 118 HOH HOH . 
G 5 HOH B 96 2396 92 HOH HOH . 
G 5 HOH B 97 2397 196 HOH HOH . 
G 5 HOH B 98 2398 298 HOH HOH . 
G 5 HOH B 99 2399 239 HOH HOH . 
G 5 HOH B 100 2400 197 HOH HOH . 
G 5 HOH B 101 2401 35 HOH HOH . 
G 5 HOH B 102 2402 161 HOH HOH . 
G 5 HOH B 103 2403 27 HOH HOH . 
G 5 HOH B 104 2404 252 HOH HOH . 
G 5 HOH B 105 2405 98 HOH HOH . 
G 5 HOH B 106 2406 87 HOH HOH . 
G 5 HOH B 107 2407 99 HOH HOH . 
G 5 HOH B 108 2408 94 HOH HOH . 
G 5 HOH B 109 2409 293 HOH HOH . 
G 5 HOH B 110 2410 216 HOH HOH . 
G 5 HOH B 111 2411 201 HOH HOH . 
G 5 HOH B 112 2412 200 HOH HOH . 
G 5 HOH B 113 2413 29 HOH HOH . 
G 5 HOH B 114 2414 181 HOH HOH . 
G 5 HOH B 115 2415 215 HOH HOH . 
G 5 HOH B 116 2416 220 HOH HOH . 
G 5 HOH B 117 2417 278 HOH HOH . 
G 5 HOH B 118 2418 81 HOH HOH . 
G 5 HOH B 119 2419 274 HOH HOH . 
G 5 HOH B 120 2420 243 HOH HOH . 
G 5 HOH B 121 2421 77 HOH HOH . 
G 5 HOH B 122 2422 102 HOH HOH . 
G 5 HOH B 123 2423 223 HOH HOH . 
G 5 HOH B 124 2424 194 HOH HOH . 
G 5 HOH B 125 2425 62 HOH HOH . 
G 5 HOH B 126 2426 150 HOH HOH . 
G 5 HOH B 127 2427 80 HOH HOH . 
G 5 HOH B 128 2428 184 HOH HOH . 
G 5 HOH B 129 2429 307 HOH HOH . 
G 5 HOH B 130 2430 73 HOH HOH . 
G 5 HOH B 131 2431 266 HOH HOH . 
G 5 HOH B 132 2432 230 HOH HOH . 
G 5 HOH B 133 2433 309 HOH HOH . 
G 5 HOH B 134 2434 21 HOH HOH . 
G 5 HOH B 135 2435 155 HOH HOH . 
G 5 HOH B 136 2436 153 HOH HOH . 
G 5 HOH B 137 2437 225 HOH HOH . 
G 5 HOH B 138 2438 157 HOH HOH . 
G 5 HOH B 139 2439 236 HOH HOH . 
G 5 HOH B 140 2440 249 HOH HOH . 
G 5 HOH B 141 2441 56 HOH HOH . 
G 5 HOH B 142 2442 275 HOH HOH . 
G 5 HOH B 143 2443 47 HOH HOH . 
G 5 HOH B 144 2444 2 HOH HOH . 
G 5 HOH B 145 2445 198 HOH HOH . 
G 5 HOH B 146 2446 106 HOH HOH . 
G 5 HOH B 147 2447 74 HOH HOH . 
G 5 HOH B 148 2448 310 HOH HOH . 
G 5 HOH B 149 2449 42 HOH HOH . 
G 5 HOH B 150 2450 166 HOH HOH . 
G 5 HOH B 151 2451 270 HOH HOH . 
G 5 HOH B 152 2452 209 HOH HOH . 
G 5 HOH B 153 2453 264 HOH HOH . 
G 5 HOH B 154 2454 55 HOH HOH . 
G 5 HOH B 155 2455 303 HOH HOH . 
G 5 HOH B 156 2456 134 HOH HOH . 
G 5 HOH B 157 2457 250 HOH HOH . 
G 5 HOH B 158 2458 7 HOH HOH . 
G 5 HOH B 159 2459 208 HOH HOH . 
G 5 HOH B 160 2460 226 HOH HOH . 
G 5 HOH B 161 2461 299 HOH HOH . 
G 5 HOH B 162 2462 32 HOH HOH . 
G 5 HOH B 163 2463 207 HOH HOH . 
G 5 HOH B 164 2464 133 HOH HOH . 
G 5 HOH B 165 2465 105 HOH HOH . 
G 5 HOH B 166 2466 158 HOH HOH . 
G 5 HOH B 167 2467 93 HOH HOH . 
G 5 HOH B 168 2468 269 HOH HOH . 
G 5 HOH B 169 2469 83 HOH HOH . 
G 5 HOH B 170 2470 96 HOH HOH . 
G 5 HOH B 171 2471 286 HOH HOH . 
G 5 HOH B 172 2472 30 HOH HOH . 
G 5 HOH B 173 2473 156 HOH HOH . 
G 5 HOH B 174 2474 205 HOH HOH . 
G 5 HOH B 175 2475 235 HOH HOH . 
G 5 HOH B 176 2476 113 HOH HOH . 
G 5 HOH B 177 2477 313 HOH HOH . 
G 5 HOH B 178 2478 203 HOH HOH . 
G 5 HOH B 179 2479 253 HOH HOH . 
G 5 HOH B 180 2480 193 HOH HOH . 
G 5 HOH B 181 2481 86 HOH HOH . 
G 5 HOH B 182 2482 305 HOH HOH . 
G 5 HOH B 183 2483 82 HOH HOH . 
G 5 HOH B 184 2484 25 HOH HOH . 
G 5 HOH B 185 2485 26 HOH HOH . 
G 5 HOH B 186 2486 231 HOH HOH . 
G 5 HOH B 187 2487 276 HOH HOH . 
G 5 HOH B 188 2488 182 HOH HOH . 
G 5 HOH B 189 2489 237 HOH HOH . 
G 5 HOH B 190 2490 152 HOH HOH . 
G 5 HOH B 191 2491 308 HOH HOH . 
G 5 HOH B 192 2492 172 HOH HOH . 
G 5 HOH B 193 2493 28 HOH HOH . 
H 5 HOH J 1 2401 52 HOH HOH . 
H 5 HOH J 2 2402 54 HOH HOH . 
H 5 HOH J 3 2403 129 HOH HOH . 
H 5 HOH J 4 2404 132 HOH HOH . 
H 5 HOH J 5 2405 126 HOH HOH . 
H 5 HOH J 6 2406 51 HOH HOH . 
H 5 HOH J 7 2407 147 HOH HOH . 
H 5 HOH J 8 2408 4 HOH HOH . 
H 5 HOH J 9 2409 124 HOH HOH . 
H 5 HOH J 10 2410 300 HOH HOH . 
H 5 HOH J 11 2411 131 HOH HOH . 
H 5 HOH J 12 2412 122 HOH HOH . 
H 5 HOH J 13 2413 144 HOH HOH . 
H 5 HOH J 14 2414 304 HOH HOH . 
H 5 HOH J 15 2415 130 HOH HOH . 
H 5 HOH J 16 2416 127 HOH HOH . 
H 5 HOH J 17 2417 128 HOH HOH . 
H 5 HOH J 18 2418 294 HOH HOH . 
H 5 HOH J 19 2419 167 HOH HOH . 
H 5 HOH J 20 2420 123 HOH HOH . 
H 5 HOH J 21 2421 183 HOH HOH . 
H 5 HOH J 22 2422 295 HOH HOH . 
H 5 HOH J 23 2423 296 HOH HOH . 
H 5 HOH J 24 2424 180 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -9.004 
_atom_site.Cartn_y               -24.386 
_atom_site.Cartn_z               2.546 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        46.7 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           2204 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           340 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#