data_7BDQ
#
_model_server_result.job_id            vPuN8t-_kk8AUNtqCCjgAA 
_model_server_result.datetime_utc      '2025-01-10 16:22:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bdq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    7BDQ 
#
_exptl.entry_id    7BDQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              672.84 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[(2~{S})-4-cyclohexyl-1-[[(3~{R})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]-4-[[(1-phenylpyrazolo[3,4-d]pyrimidin-4-yl)amino]methyl]benzamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7BDQ 
_cell.length_a            65.027 
_cell.length_b            73.041 
_cell.length_c            74.347 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BDQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C35 H44 N8 O4 S' 
_chem_comp.formula_weight    672.84 
_chem_comp.id                TJZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[(2~{S})-4-cyclohexyl-1-[[(3~{R})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]-4-[[(1-phenylpyrazolo[3,4-d]pyrimidin-4-yl)amino]methyl]benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O2 S TJZ doub 340 n n 
C5 S TJZ sing 341 n n 
S O1 TJZ doub 342 n n 
S N2 TJZ sing 343 n n 
C6 N2 TJZ sing 344 n n 
C6 C7 TJZ sing 345 n n 
N2 C4 TJZ sing 346 n n 
C7 C8 TJZ sing 347 n n 
C4 C3 TJZ sing 348 n n 
C8 C3 TJZ sing 349 n n 
C3 N1 TJZ sing 350 n n 
O3 C2 TJZ doub 351 n n 
N1 C2 TJZ sing 352 n n 
C2 C1 TJZ sing 353 n n 
C1 C9 TJZ sing 354 n n 
C1 N TJZ sing 355 n n 
C10 C9 TJZ sing 356 n n 
C10 C11 TJZ sing 357 n n 
C16 C11 TJZ sing 358 n n 
C16 C15 TJZ sing 359 n n 
N C TJZ sing 360 n n 
C11 C12 TJZ sing 361 n n 
C15 C14 TJZ sing 362 n n 
C O TJZ doub 363 n n 
C C17 TJZ sing 364 n n 
C12 C13 TJZ sing 365 n n 
C20 C17 TJZ doub 366 n y 
C20 C21 TJZ sing 367 n y 
C17 C18 TJZ sing 368 n y 
C14 C13 TJZ sing 369 n n 
C21 C22 TJZ doub 370 n y 
C18 C19 TJZ doub 371 n y 
C25 N4 TJZ doub 372 n y 
C25 N5 TJZ sing 373 n y 
C22 C19 TJZ sing 374 n y 
C22 C23 TJZ sing 375 n n 
N4 C24 TJZ sing 376 n y 
C23 N3 TJZ sing 377 n n 
N5 C26 TJZ doub 378 n y 
C24 N3 TJZ sing 379 n n 
C24 C27 TJZ doub 380 n y 
C26 C27 TJZ sing 381 n y 
C26 N7 TJZ sing 382 n y 
C34 C33 TJZ doub 383 n y 
C34 C29 TJZ sing 384 n y 
C33 C32 TJZ sing 385 n y 
C27 C28 TJZ sing 386 n y 
N7 C29 TJZ sing 387 n n 
N7 N6 TJZ sing 388 n y 
C29 C30 TJZ doub 389 n y 
C32 C31 TJZ doub 390 n y 
C28 N6 TJZ doub 391 n y 
C30 C31 TJZ sing 392 n y 
C1 H1 TJZ sing 393 n n 
N1 H2 TJZ sing 394 n n 
C3 H3 TJZ sing 395 n n 
C4 H4 TJZ sing 396 n n 
C4 H5 TJZ sing 397 n n 
C5 H6 TJZ sing 398 n n 
C5 H7 TJZ sing 399 n n 
C5 H8 TJZ sing 400 n n 
C6 H9 TJZ sing 401 n n 
C6 H10 TJZ sing 402 n n 
C7 H11 TJZ sing 403 n n 
C7 H12 TJZ sing 404 n n 
C8 H13 TJZ sing 405 n n 
C8 H14 TJZ sing 406 n n 
C9 H15 TJZ sing 407 n n 
C9 H16 TJZ sing 408 n n 
C10 H17 TJZ sing 409 n n 
C10 H18 TJZ sing 410 n n 
C11 H19 TJZ sing 411 n n 
C12 H20 TJZ sing 412 n n 
C12 H21 TJZ sing 413 n n 
C13 H22 TJZ sing 414 n n 
C13 H23 TJZ sing 415 n n 
C14 H24 TJZ sing 416 n n 
C14 H25 TJZ sing 417 n n 
C15 H26 TJZ sing 418 n n 
C15 H27 TJZ sing 419 n n 
C16 H28 TJZ sing 420 n n 
C16 H29 TJZ sing 421 n n 
C18 H30 TJZ sing 422 n n 
C19 H31 TJZ sing 423 n n 
C20 H32 TJZ sing 424 n n 
C21 H33 TJZ sing 425 n n 
C23 H34 TJZ sing 426 n n 
C23 H35 TJZ sing 427 n n 
C25 H36 TJZ sing 428 n n 
C28 H37 TJZ sing 429 n n 
N H38 TJZ sing 430 n n 
N3 H39 TJZ sing 431 n n 
C34 H40 TJZ sing 432 n n 
C33 H41 TJZ sing 433 n n 
C32 H42 TJZ sing 434 n n 
C31 H43 TJZ sing 435 n n 
C30 H44 TJZ sing 436 n n 
#
_atom_sites.entry_id                     7BDQ 
_atom_sites.fract_transf_matrix[1][1]    0.015378 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013691 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01345 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 TJZ A 1 401 401 TJZ 470 . 
C 3 EDO A 1 402 402 EDO EDO . 
D 3 EDO A 1 403 403 EDO EDO . 
E 4 MES A 1 404 404 MES MES . 
F 5 HOH A 1 501 12 HOH HOH . 
F 5 HOH A 2 502 18 HOH HOH . 
F 5 HOH A 3 503 26 HOH HOH . 
F 5 HOH A 4 504 31 HOH HOH . 
F 5 HOH A 5 505 27 HOH HOH . 
F 5 HOH A 6 506 7 HOH HOH . 
F 5 HOH A 7 507 24 HOH HOH . 
F 5 HOH A 8 508 2 HOH HOH . 
F 5 HOH A 9 509 8 HOH HOH . 
F 5 HOH A 10 510 6 HOH HOH . 
F 5 HOH A 11 511 11 HOH HOH . 
F 5 HOH A 12 512 15 HOH HOH . 
F 5 HOH A 13 513 9 HOH HOH . 
F 5 HOH A 14 514 4 HOH HOH . 
F 5 HOH A 15 515 33 HOH HOH . 
F 5 HOH A 16 516 14 HOH HOH . 
F 5 HOH A 17 517 10 HOH HOH . 
F 5 HOH A 18 518 20 HOH HOH . 
F 5 HOH A 19 519 17 HOH HOH . 
F 5 HOH A 20 520 28 HOH HOH . 
F 5 HOH A 21 521 30 HOH HOH . 
F 5 HOH A 22 522 3 HOH HOH . 
F 5 HOH A 23 523 5 HOH HOH . 
F 5 HOH A 24 524 29 HOH HOH . 
F 5 HOH A 25 525 22 HOH HOH . 
F 5 HOH A 26 526 32 HOH HOH . 
F 5 HOH A 27 527 25 HOH HOH . 
F 5 HOH A 28 528 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 TJZ . . . B 2 16.249 29.89 16.858 1 41.31 ? C1 TJZ 401 A 1 
HETATM 2 N N1 TJZ . . . B 2 15.938 31.115 14.781 1 50.24 ? N1 TJZ 401 A 1 
HETATM 3 C C2 TJZ . . . B 2 15.948 29.911 15.363 1 45.17 ? C2 TJZ 401 A 1 
HETATM 4 C C3 TJZ . . . B 2 16.492 31.372 13.454 1 58.91 ? C3 TJZ 401 A 1 
HETATM 5 C C4 TJZ . . . B 2 16.017 30.299 12.491 1 67.1 ? C4 TJZ 401 A 1 
HETATM 6 C C5 TJZ . . . B 2 17.852 28.552 9.919 1 86.67 ? C5 TJZ 401 A 1 
HETATM 7 C C6 TJZ . . . B 2 16.058 31.887 10.605 1 68.99 ? C6 TJZ 401 A 1 
HETATM 8 C C7 TJZ . . . B 2 16.57 32.971 11.529 1 63.45 ? C7 TJZ 401 A 1 
HETATM 9 C C8 TJZ . . . B 2 16.072 32.74 12.949 1 61.21 ? C8 TJZ 401 A 1 
HETATM 10 C C9 TJZ . . . B 2 16.286 28.472 17.423 1 41.15 ? C9 TJZ 401 A 1 
HETATM 11 C C10 TJZ . . . B 2 17.573 27.75 17.03 1 41.82 ? C10 TJZ 401 A 1 
HETATM 12 C C11 TJZ . . . B 2 18.654 27.628 18.11 1 40.96 ? C11 TJZ 401 A 1 
HETATM 13 C C12 TJZ . . . B 2 18.901 28.941 18.848 1 40.17 ? C12 TJZ 401 A 1 
HETATM 14 C C13 TJZ . . . B 2 20.017 28.811 19.876 1 39.78 ? C13 TJZ 401 A 1 
HETATM 15 C C14 TJZ . . . B 2 21.293 28.355 19.225 1 40.52 ? C14 TJZ 401 A 1 
HETATM 16 C C15 TJZ . . . B 2 21.089 27.034 18.533 1 40.37 ? C15 TJZ 401 A 1 
HETATM 17 C C16 TJZ . . . B 2 19.968 27.13 17.505 1 41.26 ? C16 TJZ 401 A 1 
HETATM 18 C C17 TJZ . . . B 2 14.342 32.192 19.155 1 37.75 ? C17 TJZ 401 A 1 
HETATM 19 C C18 TJZ . . . B 2 14.549 33.382 19.839 1 36.1 ? C18 TJZ 401 A 1 
HETATM 20 C C19 TJZ . . . B 2 13.486 34.071 20.39 1 35.38 ? C19 TJZ 401 A 1 
HETATM 21 C C20 TJZ . . . B 2 13.039 31.72 19.029 1 38 ? C20 TJZ 401 A 1 
HETATM 22 C C21 TJZ . . . B 2 11.98 32.415 19.582 1 36.64 ? C21 TJZ 401 A 1 
HETATM 23 C C22 TJZ . . . B 2 12.188 33.593 20.275 1 34.86 ? C22 TJZ 401 A 1 
HETATM 24 C C23 TJZ . . . B 2 11.039 34.293 20.949 1 33.16 ? C23 TJZ 401 A 1 
HETATM 25 C C24 TJZ . . . B 2 11.865 36.476 21.667 1 31.65 ? C24 TJZ 401 A 1 
HETATM 26 C C25 TJZ . . . B 2 12.097 38.145 20.135 1 33.37 ? C25 TJZ 401 A 1 
HETATM 27 C C26 TJZ . . . B 2 12.51 38.682 22.252 1 33.81 ? C26 TJZ 401 A 1 
HETATM 28 C C27 TJZ . . . B 2 12.267 37.381 22.689 1 32.61 ? C27 TJZ 401 A 1 
HETATM 29 C C28 TJZ . . . B 2 12.516 37.417 24.081 1 33.68 ? C28 TJZ 401 A 1 
HETATM 30 O O3 TJZ . . . B 2 15.701 28.871 14.76 1 47.22 ? O3 TJZ 401 A 1 
HETATM 31 N N2 TJZ . . . B 2 16.426 30.545 11.097 1 74.48 ? N2 TJZ 401 A 1 
HETATM 32 S S TJZ . . . B 2 16.273 29.305 10.047 1 84.83 ? S TJZ 401 A 1 
HETATM 33 O O2 TJZ . . . B 2 15.939 29.87 8.779 1 82.56 ? O2 TJZ 401 A 1 
HETATM 34 O O1 TJZ . . . B 2 15.372 28.366 10.638 1 82.69 ? O1 TJZ 401 A 1 
HETATM 35 N N TJZ . . . B 2 15.223 30.665 17.518 1 40.95 ? N TJZ 401 A 1 
HETATM 36 C C TJZ . . . B 2 15.492 31.442 18.57 1 39.29 ? C TJZ 401 A 1 
HETATM 37 O O TJZ . . . B 2 16.622 31.552 19.029 1 40.1 ? O TJZ 401 A 1 
HETATM 38 N N3 TJZ . . . B 2 11.487 35.228 21.959 1 32.36 ? N3 TJZ 401 A 1 
HETATM 39 N N6 TJZ . . . B 2 12.857 38.624 24.476 1 35.83 ? N6 TJZ 401 A 1 
HETATM 40 N N7 TJZ . . . B 2 12.844 39.423 23.351 1 36.26 ? N7 TJZ 401 A 1 
HETATM 41 N N5 TJZ . . . B 2 12.443 39.114 20.991 1 33.58 ? N5 TJZ 401 A 1 
HETATM 42 N N4 TJZ . . . B 2 11.792 36.871 20.388 1 31.55 ? N4 TJZ 401 A 1 
HETATM 43 C C29 TJZ . . . B 2 13.119 40.813 23.48 1 39.29 ? C29 TJZ 401 A 1 
HETATM 44 C C34 TJZ . . . B 2 13.539 41.549 22.373 1 41.48 ? C34 TJZ 401 A 1 
HETATM 45 C C33 TJZ . . . B 2 13.865 42.888 22.523 1 44.47 ? C33 TJZ 401 A 1 
HETATM 46 C C32 TJZ . . . B 2 13.774 43.497 23.763 1 45.15 ? C32 TJZ 401 A 1 
HETATM 47 C C31 TJZ . . . B 2 13.344 42.77 24.858 1 43.95 ? C31 TJZ 401 A 1 
HETATM 48 C C30 TJZ . . . B 2 13.014 41.43 24.724 1 41.41 ? C30 TJZ 401 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           48 
#