data_7BDZ
#
_model_server_result.job_id            sbedV_DOD7JnOipBIXMD1w 
_model_server_result.datetime_utc      '2024-11-15 20:17:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bdz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":222}' 
#
_entry.id    7BDZ 
#
_exptl.entry_id    7BDZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              102.906 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Rhodium 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7BDZ 
_cell.length_a            77.964 
_cell.length_b            77.964 
_cell.length_c            37.291 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BDZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 T N N 
? 5 U N N 
? 5 V N N 
? 5 W N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 AAA CYS 6 1_555 A SG CYS 127 AAA CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf2 A SG CYS 30 AAA CYS 30 1_555 A SG CYS 115 AAA CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf3 A SG CYS 64 AAA CYS 64 1_555 A SG CYS 80 AAA CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf4 A SG CYS 76 AAA CYS 76 1_555 A SG CYS 94 AAA CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
metalc ? metalc1 A NZ LYS 13 AAA LYS 13 1_555 U RH1 RH . AAA RH 220 7_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc2 A NH2 ARG 14 AAA ARG 14 1_555 T RH1 RH . AAA RH 219 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.937 ? 
metalc ? metalc3 A NE2 HIS 15 AAA HIS 15 1_555 T RH1 RH . AAA RH 219 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.358 ? 
metalc ? metalc4 A OD2 ASP 18 AAA ASP 18 1_555 V RH1 RH . AAA RH 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc5 A OD2 ASP 18 AAA ASP 18 1_555 W RH1 RH . AAA RH 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? 
metalc ? metalc6 A O LEU 129 AAA LEU 129 1_555 U RH1 RH . AAA RH 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc7 A OXT LEU 129 AAA LEU 129 1_555 U RH1 RH . AAA RH 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? 
metalc ? metalc8 A OXT LEU 129 AAA LEU 129 1_555 U RH1 RH . AAA RH 220 7_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? 
metalc ? metalc9 N O ACT . AAA ACT 213 1_555 U RH1 RH . AAA RH 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? 
metalc ? metalc10 N OXT ACT . AAA ACT 213 1_555 U RH1 RH . AAA RH 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc11 N OXT ACT . AAA ACT 213 1_555 U RH1 RH . AAA RH 220 7_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? 
metalc ? metalc12 Q O ACT . AAA ACT 216 1_555 T RH1 RH . AAA RH 219 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc13 T RH1 RH . AAA RH 219 1_555 X O HOH . AAA HOH 301 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc14 U RH1 RH . AAA RH 220 1_555 X O HOH . AAA HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
#
_chem_comp.formula           'Rh 1' 
_chem_comp.formula_weight    102.906 
_chem_comp.id                RH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Rhodium 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7BDZ 
_atom_sites.fract_transf_matrix[1][1]    0.012826 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012826 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026816 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NO3 AAA 1 201 2 NO3 NO3 . 
C 2 NO3 AAA 1 202 4 NO3 NO3 . 
D 2 NO3 AAA 1 203 5 NO3 NO3 . 
E 2 NO3 AAA 1 204 7 NO3 NO3 . 
F 2 NO3 AAA 1 205 8 NO3 NO3 . 
G 2 NO3 AAA 1 206 10 NO3 NO3 . 
H 2 NO3 AAA 1 207 11 NO3 NO3 . 
I 2 NO3 AAA 1 208 12 NO3 NO3 . 
J 2 NO3 AAA 1 209 13 NO3 NO3 . 
K 3 ACT AAA 1 210 3 ACT ACT . 
L 3 ACT AAA 1 211 5 ACT ACT . 
M 3 ACT AAA 1 212 6 ACT ACT . 
N 3 ACT AAA 1 213 7 ACT ACT . 
O 3 ACT AAA 1 214 8 ACT ACT . 
P 3 ACT AAA 1 215 9 ACT ACT . 
Q 3 ACT AAA 1 216 10 ACT ACT . 
R 4 EDO AAA 1 217 1 EDO EDO . 
S 4 EDO AAA 1 218 2 EDO EDO . 
T 5 RH AAA 1 219 1 RH RH . 
U 5 RH AAA 1 220 2 RH RH . 
V 5 RH AAA 1 221 3 RH RH . 
W 5 RH AAA 1 222 4 RH RH . 
X 6 HOH AAA 1 301 198 HOH HOH . 
X 6 HOH AAA 2 302 103 HOH HOH . 
X 6 HOH AAA 3 303 195 HOH HOH . 
X 6 HOH AAA 4 304 10 HOH HOH . 
X 6 HOH AAA 5 305 151 HOH HOH . 
X 6 HOH AAA 6 306 140 HOH HOH . 
X 6 HOH AAA 7 307 122 HOH HOH . 
X 6 HOH AAA 8 308 58 HOH HOH . 
X 6 HOH AAA 9 309 90 HOH HOH . 
X 6 HOH AAA 10 310 167 HOH HOH . 
X 6 HOH AAA 11 311 116 HOH HOH . 
X 6 HOH AAA 12 312 57 HOH HOH . 
X 6 HOH AAA 13 313 114 HOH HOH . 
X 6 HOH AAA 14 314 18 HOH HOH . 
X 6 HOH AAA 15 315 105 HOH HOH . 
X 6 HOH AAA 16 316 72 HOH HOH . 
X 6 HOH AAA 17 317 16 HOH HOH . 
X 6 HOH AAA 18 318 11 HOH HOH . 
X 6 HOH AAA 19 319 123 HOH HOH . 
X 6 HOH AAA 20 320 170 HOH HOH . 
X 6 HOH AAA 21 321 127 HOH HOH . 
X 6 HOH AAA 22 322 79 HOH HOH . 
X 6 HOH AAA 23 323 155 HOH HOH . 
X 6 HOH AAA 24 324 6 HOH HOH . 
X 6 HOH AAA 25 325 23 HOH HOH . 
X 6 HOH AAA 26 326 176 HOH HOH . 
X 6 HOH AAA 27 327 29 HOH HOH . 
X 6 HOH AAA 28 328 143 HOH HOH . 
X 6 HOH AAA 29 329 80 HOH HOH . 
X 6 HOH AAA 30 330 145 HOH HOH . 
X 6 HOH AAA 31 331 47 HOH HOH . 
X 6 HOH AAA 32 332 135 HOH HOH . 
X 6 HOH AAA 33 333 150 HOH HOH . 
X 6 HOH AAA 34 334 37 HOH HOH . 
X 6 HOH AAA 35 335 141 HOH HOH . 
X 6 HOH AAA 36 336 173 HOH HOH . 
X 6 HOH AAA 37 337 194 HOH HOH . 
X 6 HOH AAA 38 338 117 HOH HOH . 
X 6 HOH AAA 39 339 49 HOH HOH . 
X 6 HOH AAA 40 340 126 HOH HOH . 
X 6 HOH AAA 41 341 134 HOH HOH . 
X 6 HOH AAA 42 342 139 HOH HOH . 
X 6 HOH AAA 43 343 65 HOH HOH . 
X 6 HOH AAA 44 344 119 HOH HOH . 
X 6 HOH AAA 45 345 92 HOH HOH . 
X 6 HOH AAA 46 346 13 HOH HOH . 
X 6 HOH AAA 47 347 83 HOH HOH . 
X 6 HOH AAA 48 348 21 HOH HOH . 
X 6 HOH AAA 49 349 91 HOH HOH . 
X 6 HOH AAA 50 350 125 HOH HOH . 
X 6 HOH AAA 51 351 148 HOH HOH . 
X 6 HOH AAA 52 352 2 HOH HOH . 
X 6 HOH AAA 53 353 133 HOH HOH . 
X 6 HOH AAA 54 354 39 HOH HOH . 
X 6 HOH AAA 55 355 138 HOH HOH . 
X 6 HOH AAA 56 356 4 HOH HOH . 
X 6 HOH AAA 57 357 149 HOH HOH . 
X 6 HOH AAA 58 358 33 HOH HOH . 
X 6 HOH AAA 59 359 51 HOH HOH . 
X 6 HOH AAA 60 360 62 HOH HOH . 
X 6 HOH AAA 61 361 130 HOH HOH . 
X 6 HOH AAA 62 362 180 HOH HOH . 
X 6 HOH AAA 63 363 129 HOH HOH . 
X 6 HOH AAA 64 364 54 HOH HOH . 
X 6 HOH AAA 65 365 162 HOH HOH . 
X 6 HOH AAA 66 366 24 HOH HOH . 
X 6 HOH AAA 67 367 77 HOH HOH . 
X 6 HOH AAA 68 368 190 HOH HOH . 
X 6 HOH AAA 69 369 169 HOH HOH . 
X 6 HOH AAA 70 370 20 HOH HOH . 
X 6 HOH AAA 71 371 184 HOH HOH . 
X 6 HOH AAA 72 372 101 HOH HOH . 
X 6 HOH AAA 73 373 197 HOH HOH . 
X 6 HOH AAA 74 374 185 HOH HOH . 
X 6 HOH AAA 75 375 172 HOH HOH . 
X 6 HOH AAA 76 376 50 HOH HOH . 
X 6 HOH AAA 77 377 84 HOH HOH . 
X 6 HOH AAA 78 378 27 HOH HOH . 
X 6 HOH AAA 79 379 179 HOH HOH . 
X 6 HOH AAA 80 380 110 HOH HOH . 
X 6 HOH AAA 81 381 28 HOH HOH . 
X 6 HOH AAA 82 382 111 HOH HOH . 
X 6 HOH AAA 83 383 174 HOH HOH . 
X 6 HOH AAA 84 384 193 HOH HOH . 
X 6 HOH AAA 85 385 186 HOH HOH . 
X 6 HOH AAA 86 386 161 HOH HOH . 
X 6 HOH AAA 87 387 15 HOH HOH . 
X 6 HOH AAA 88 388 163 HOH HOH . 
X 6 HOH AAA 89 389 146 HOH HOH . 
X 6 HOH AAA 90 390 82 HOH HOH . 
X 6 HOH AAA 91 391 55 HOH HOH . 
X 6 HOH AAA 92 392 159 HOH HOH . 
X 6 HOH AAA 93 393 43 HOH HOH . 
X 6 HOH AAA 94 394 147 HOH HOH . 
X 6 HOH AAA 95 395 53 HOH HOH . 
X 6 HOH AAA 96 396 115 HOH HOH . 
X 6 HOH AAA 97 397 35 HOH HOH . 
X 6 HOH AAA 98 398 73 HOH HOH . 
X 6 HOH AAA 99 399 131 HOH HOH . 
X 6 HOH AAA 100 400 136 HOH HOH . 
X 6 HOH AAA 101 401 102 HOH HOH . 
X 6 HOH AAA 102 402 191 HOH HOH . 
X 6 HOH AAA 103 403 187 HOH HOH . 
X 6 HOH AAA 104 404 78 HOH HOH . 
X 6 HOH AAA 105 405 177 HOH HOH . 
X 6 HOH AAA 106 406 112 HOH HOH . 
X 6 HOH AAA 107 407 118 HOH HOH . 
X 6 HOH AAA 108 408 98 HOH HOH . 
X 6 HOH AAA 109 409 182 HOH HOH . 
X 6 HOH AAA 110 410 26 HOH HOH . 
X 6 HOH AAA 111 411 152 HOH HOH . 
X 6 HOH AAA 112 412 160 HOH HOH . 
X 6 HOH AAA 113 413 14 HOH HOH . 
X 6 HOH AAA 114 414 196 HOH HOH . 
X 6 HOH AAA 115 415 76 HOH HOH . 
X 6 HOH AAA 116 416 189 HOH HOH . 
X 6 HOH AAA 117 417 175 HOH HOH . 
X 6 HOH AAA 118 418 158 HOH HOH . 
X 6 HOH AAA 119 419 154 HOH HOH . 
X 6 HOH AAA 120 420 74 HOH HOH . 
X 6 HOH AAA 121 421 109 HOH HOH . 
X 6 HOH AAA 122 422 66 HOH HOH . 
X 6 HOH AAA 123 423 192 HOH HOH . 
X 6 HOH AAA 124 424 42 HOH HOH . 
X 6 HOH AAA 125 425 87 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           RH 
_atom_site.label_atom_id         RH1 
_atom_site.label_comp_id         RH 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         W 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               -23.959 
_atom_site.Cartn_y               -18.31 
_atom_site.Cartn_z               -14.65 
_atom_site.occupancy             0.4 
_atom_site.B_iso_or_equiv        67.69 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          RH1 
_atom_site.auth_comp_id          RH 
_atom_site.auth_seq_id           222 
_atom_site.auth_asym_id          AAA 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#