data_7BE2 # _model_server_result.job_id bAQ6f1m864oDsO00ppT34w _model_server_result.datetime_utc '2024-10-19 22:41:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7be2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7BE2 # _exptl.entry_id 7BE2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BE2 _cell.length_a 78.93 _cell.length_b 78.93 _cell.length_c 37.12 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BE2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 AAA CYS 6 1_555 A SG CYS 127 AAA CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? disulf ? disulf2 A SG CYS 30 AAA CYS 30 1_555 A SG CYS 115 AAA CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? disulf ? disulf3 A SG CYS 64 AAA CYS 64 1_555 A SG CYS 80 AAA CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf4 A SG CYS 76 AAA CYS 76 1_555 A SG CYS 94 AAA CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc1 A NZ LYS 13 AAA LYS 13 1_555 F RH1 RH . AAA RH 205 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc2 A NZ LYS 13 AAA LYS 13 1_555 F RH1 RH . AAA RH 205 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc3 A NH1 ARG 14 AAA ARG 14 1_555 G RH1 RH . AAA RH 206 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.921 ? metalc ? metalc4 A NE2 HIS 15 AAA HIS 15 1_555 G RH1 RH . AAA RH 206 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.516 ? metalc ? metalc5 A NZ LYS 33 AAA LYS 33 1_555 H RH1 RH . AAA RH 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc6 A O SER 60 AAA SER 60 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc7 A O CYS 64 AAA CYS 64 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc8 A OG SER 72 AAA SER 72 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc9 A O ARG 73 AAA ARG 73 1_555 B NA NA . AAA NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc10 A OD1 ASN 93 AAA ASN 93 1_555 J RH1 RH . AAA RH 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc11 A OD2 ASP 101 AAA ASP 101 1_555 E RH1 RH . AAA RH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc12 A OD1 ASP 101 AAA ASP 101 1_555 K RH1 RH . AAA RH 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? metalc ? metalc13 A OXT LEU 129 AAA LEU 129 1_555 F RH1 RH . AAA RH 205 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc14 B NA NA . AAA NA 201 1_555 L O HOH . AAA HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc15 B NA NA . AAA NA 201 1_555 L O HOH . AAA HOH 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc16 C O ACT . AAA ACT 202 1_555 H RH1 RH . AAA RH 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc17 F RH1 RH . AAA RH 205 1_555 L O HOH . AAA HOH 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc18 G RH1 RH . AAA RH 206 1_555 L O HOH . AAA HOH 307 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.346 ? metalc ? metalc19 G RH1 RH . AAA RH 206 1_555 L O HOH . AAA HOH 365 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.821 ? metalc ? metalc20 I RH1 RH . AAA RH 208 1_555 L O HOH . AAA HOH 308 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc21 K RH1 RH . AAA RH 210 1_555 L O HOH . AAA HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? metalc ? metalc22 K RH1 RH . AAA RH 210 1_555 L O HOH . AAA HOH 396 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7BE2 _atom_sites.fract_transf_matrix[1][1] 0.012669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012669 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02694 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA AAA 1 201 131 NA NA . C 3 ACT AAA 1 202 401 ACT ACT . D 4 GOL AAA 1 203 501 GOL GOL . E 5 RH AAA 1 204 1 RH RH . F 5 RH AAA 1 205 2 RH RH . G 5 RH AAA 1 206 3 RH RH . H 5 RH AAA 1 207 4 RH RH . I 5 RH AAA 1 208 5 RH RH . J 5 RH AAA 1 209 6 RH RH . K 5 RH AAA 1 210 7 RH RH . L 6 HOH AAA 1 301 97 HOH HOH . L 6 HOH AAA 2 302 24 HOH HOH . L 6 HOH AAA 3 303 125 HOH HOH . L 6 HOH AAA 4 304 110 HOH HOH . L 6 HOH AAA 5 305 16 HOH HOH . L 6 HOH AAA 6 306 107 HOH HOH . L 6 HOH AAA 7 307 76 HOH HOH . L 6 HOH AAA 8 308 123 HOH HOH . L 6 HOH AAA 9 309 41 HOH HOH . L 6 HOH AAA 10 310 124 HOH HOH . L 6 HOH AAA 11 311 95 HOH HOH . L 6 HOH AAA 12 312 98 HOH HOH . L 6 HOH AAA 13 313 118 HOH HOH . L 6 HOH AAA 14 314 88 HOH HOH . L 6 HOH AAA 15 315 64 HOH HOH . L 6 HOH AAA 16 316 25 HOH HOH . L 6 HOH AAA 17 317 22 HOH HOH . L 6 HOH AAA 18 318 67 HOH HOH . L 6 HOH AAA 19 319 28 HOH HOH . L 6 HOH AAA 20 320 31 HOH HOH . L 6 HOH AAA 21 321 106 HOH HOH . L 6 HOH AAA 22 322 120 HOH HOH . L 6 HOH AAA 23 323 23 HOH HOH . L 6 HOH AAA 24 324 108 HOH HOH . L 6 HOH AAA 25 325 37 HOH HOH . L 6 HOH AAA 26 326 44 HOH HOH . L 6 HOH AAA 27 327 80 HOH HOH . L 6 HOH AAA 28 328 102 HOH HOH . L 6 HOH AAA 29 329 12 HOH HOH . L 6 HOH AAA 30 330 29 HOH HOH . L 6 HOH AAA 31 331 33 HOH HOH . L 6 HOH AAA 32 332 1 HOH HOH . L 6 HOH AAA 33 333 87 HOH HOH . L 6 HOH AAA 34 334 6 HOH HOH . L 6 HOH AAA 35 335 20 HOH HOH . L 6 HOH AAA 36 336 36 HOH HOH . L 6 HOH AAA 37 337 26 HOH HOH . L 6 HOH AAA 38 338 96 HOH HOH . L 6 HOH AAA 39 339 81 HOH HOH . L 6 HOH AAA 40 340 17 HOH HOH . L 6 HOH AAA 41 341 57 HOH HOH . L 6 HOH AAA 42 342 9 HOH HOH . L 6 HOH AAA 43 343 77 HOH HOH . L 6 HOH AAA 44 344 19 HOH HOH . L 6 HOH AAA 45 345 15 HOH HOH . L 6 HOH AAA 46 346 54 HOH HOH . L 6 HOH AAA 47 347 55 HOH HOH . L 6 HOH AAA 48 348 5 HOH HOH . L 6 HOH AAA 49 349 42 HOH HOH . L 6 HOH AAA 50 350 8 HOH HOH . L 6 HOH AAA 51 351 7 HOH HOH . L 6 HOH AAA 52 352 59 HOH HOH . L 6 HOH AAA 53 353 94 HOH HOH . L 6 HOH AAA 54 354 75 HOH HOH . L 6 HOH AAA 55 355 72 HOH HOH . L 6 HOH AAA 56 356 82 HOH HOH . L 6 HOH AAA 57 357 89 HOH HOH . L 6 HOH AAA 58 358 60 HOH HOH . L 6 HOH AAA 59 359 78 HOH HOH . L 6 HOH AAA 60 360 39 HOH HOH . L 6 HOH AAA 61 361 14 HOH HOH . L 6 HOH AAA 62 362 83 HOH HOH . L 6 HOH AAA 63 363 66 HOH HOH . L 6 HOH AAA 64 364 13 HOH HOH . L 6 HOH AAA 65 365 121 HOH HOH . L 6 HOH AAA 66 366 21 HOH HOH . L 6 HOH AAA 67 367 40 HOH HOH . L 6 HOH AAA 68 368 93 HOH HOH . L 6 HOH AAA 69 369 4 HOH HOH . L 6 HOH AAA 70 370 92 HOH HOH . L 6 HOH AAA 71 371 109 HOH HOH . L 6 HOH AAA 72 372 27 HOH HOH . L 6 HOH AAA 73 373 3 HOH HOH . L 6 HOH AAA 74 374 101 HOH HOH . L 6 HOH AAA 75 375 117 HOH HOH . L 6 HOH AAA 76 376 30 HOH HOH . L 6 HOH AAA 77 377 91 HOH HOH . L 6 HOH AAA 78 378 2 HOH HOH . L 6 HOH AAA 79 379 99 HOH HOH . L 6 HOH AAA 80 380 103 HOH HOH . L 6 HOH AAA 81 381 47 HOH HOH . L 6 HOH AAA 82 382 50 HOH HOH . L 6 HOH AAA 83 383 111 HOH HOH . L 6 HOH AAA 84 384 114 HOH HOH . L 6 HOH AAA 85 385 79 HOH HOH . L 6 HOH AAA 86 386 56 HOH HOH . L 6 HOH AAA 87 387 86 HOH HOH . L 6 HOH AAA 88 388 32 HOH HOH . L 6 HOH AAA 89 389 116 HOH HOH . L 6 HOH AAA 90 390 58 HOH HOH . L 6 HOH AAA 91 391 104 HOH HOH . L 6 HOH AAA 92 392 65 HOH HOH . L 6 HOH AAA 93 393 52 HOH HOH . L 6 HOH AAA 94 394 18 HOH HOH . L 6 HOH AAA 95 395 115 HOH HOH . L 6 HOH AAA 96 396 122 HOH HOH . L 6 HOH AAA 97 397 85 HOH HOH . L 6 HOH AAA 98 398 90 HOH HOH . L 6 HOH AAA 99 399 112 HOH HOH . L 6 HOH AAA 100 400 53 HOH HOH . L 6 HOH AAA 101 401 10 HOH HOH . L 6 HOH AAA 102 402 38 HOH HOH . L 6 HOH AAA 103 403 70 HOH HOH . L 6 HOH AAA 104 404 84 HOH HOH . L 6 HOH AAA 105 405 61 HOH HOH . L 6 HOH AAA 106 406 119 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 7.82 _atom_site.Cartn_y 14.546 _atom_site.Cartn_z 31.279 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id AAA _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #