data_7BEA # _model_server_result.job_id Rb83GrI3PF6WeMbAYKkH-g _model_server_result.datetime_utc '2025-04-13 00:57:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bea # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7BEA # _exptl.entry_id 7BEA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 462.585 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(aminomethyl)-6-[(2-methyl-3-phenyl-phenyl)methoxy]-~{N}-(2-phenylethyl)imidazo[1,2-a]pyridin-3-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BEA _cell.length_a 32.617 _cell.length_b 54.616 _cell.length_c 140.962 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BEA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 40 1_555 A SG CYS 97 A CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf2 B SG CYS 23 B CYS 40 1_555 B SG CYS 97 B CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'C30 H30 N4 O' _chem_comp.formula_weight 462.585 _chem_comp.id TK2 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(aminomethyl)-6-[(2-methyl-3-phenyl-phenyl)methoxy]-~{N}-(2-phenylethyl)imidazo[1,2-a]pyridin-3-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 C16 TK2 doub 306 n y C17 C18 TK2 sing 307 n y C16 C15 TK2 sing 308 n y C18 C19 TK2 doub 309 n y C15 C14 TK2 doub 310 n y C19 C14 TK2 sing 311 n y C14 C13 TK2 sing 312 n n C13 C12 TK2 sing 313 n n C12 N3 TK2 sing 314 n n N1 C8 TK2 sing 315 n n N3 C6 TK2 sing 316 n n C8 C7 TK2 sing 317 n n C6 C7 TK2 doub 318 n y C6 N TK2 sing 319 n y C7 N2 TK2 sing 320 n y N C5 TK2 sing 321 n y N C9 TK2 sing 322 n y N2 C9 TK2 doub 323 n y C5 C4 TK2 doub 324 n y C C1 TK2 sing 325 n n C9 C10 TK2 sing 326 n y C3 O TK2 sing 327 n n C3 C2 TK2 sing 328 n n C27 C26 TK2 doub 329 n y C27 C28 TK2 sing 330 n y C4 O TK2 sing 331 n n C4 C11 TK2 sing 332 n y C26 C25 TK2 sing 333 n y C28 C29 TK2 doub 334 n y C1 C2 TK2 doub 335 n y C1 C23 TK2 sing 336 n y C25 C24 TK2 doub 337 n y C29 C24 TK2 sing 338 n y C10 C11 TK2 doub 339 n y C2 C20 TK2 sing 340 n y C24 C23 TK2 sing 341 n n C23 C22 TK2 doub 342 n y C20 C21 TK2 doub 343 n y C22 C21 TK2 sing 344 n y C11 H1 TK2 sing 345 n n C12 H2 TK2 sing 346 n n C12 H3 TK2 sing 347 n n C13 H4 TK2 sing 348 n n C13 H5 TK2 sing 349 n n C15 H6 TK2 sing 350 n n C17 H7 TK2 sing 351 n n C19 H8 TK2 sing 352 n n C20 H9 TK2 sing 353 n n C21 H10 TK2 sing 354 n n C25 H11 TK2 sing 355 n n C27 H12 TK2 sing 356 n n C28 H13 TK2 sing 357 n n C29 H14 TK2 sing 358 n n N1 H15 TK2 sing 359 n n N1 H16 TK2 sing 360 n n C8 H18 TK2 sing 361 n n C8 H19 TK2 sing 362 n n N3 H20 TK2 sing 363 n n C18 H21 TK2 sing 364 n n C16 H22 TK2 sing 365 n n C5 H23 TK2 sing 366 n n C10 H24 TK2 sing 367 n n C3 H25 TK2 sing 368 n n C3 H26 TK2 sing 369 n n C22 H27 TK2 sing 370 n n C H28 TK2 sing 371 n n C H29 TK2 sing 372 n n C H30 TK2 sing 373 n n C26 H31 TK2 sing 374 n n # _atom_sites.entry_id 7BEA _atom_sites.fract_transf_matrix[1][1] 0.030659 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007094 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TK2 A 1 201 1 TK2 R25 . D 3 HOH A 1 301 40 HOH HOH . D 3 HOH A 2 302 33 HOH HOH . D 3 HOH A 3 303 8 HOH HOH . D 3 HOH A 4 304 18 HOH HOH . D 3 HOH A 5 305 15 HOH HOH . D 3 HOH A 6 306 55 HOH HOH . D 3 HOH A 7 307 16 HOH HOH . D 3 HOH A 8 308 6 HOH HOH . D 3 HOH A 9 309 56 HOH HOH . D 3 HOH A 10 310 2 HOH HOH . E 3 HOH B 1 201 23 HOH HOH . E 3 HOH B 2 202 58 HOH HOH . E 3 HOH B 3 203 5 HOH HOH . E 3 HOH B 4 204 22 HOH HOH . E 3 HOH B 5 205 31 HOH HOH . E 3 HOH B 6 206 27 HOH HOH . E 3 HOH B 7 207 9 HOH HOH . E 3 HOH B 8 208 24 HOH HOH . E 3 HOH B 9 209 36 HOH HOH . E 3 HOH B 10 210 38 HOH HOH . E 3 HOH B 11 211 45 HOH HOH . E 3 HOH B 12 212 46 HOH HOH . E 3 HOH B 13 213 48 HOH HOH . E 3 HOH B 14 214 30 HOH HOH . E 3 HOH B 15 215 20 HOH HOH . E 3 HOH B 16 216 28 HOH HOH . E 3 HOH B 17 217 7 HOH HOH . E 3 HOH B 18 218 53 HOH HOH . E 3 HOH B 19 219 52 HOH HOH . E 3 HOH B 20 220 49 HOH HOH . E 3 HOH B 21 221 59 HOH HOH . E 3 HOH B 22 222 47 HOH HOH . E 3 HOH B 23 223 34 HOH HOH . E 3 HOH B 24 224 4 HOH HOH . E 3 HOH B 25 225 29 HOH HOH . E 3 HOH B 26 226 26 HOH HOH . E 3 HOH B 27 227 54 HOH HOH . E 3 HOH B 28 228 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 TK2 . . . C 2 -2.119 -9.798 23.675 1 68.88 ? C11 TK2 201 A 1 HETATM 2 C C12 TK2 . . . C 2 -0.908 -9.422 17.282 1 80.89 ? C12 TK2 201 A 1 HETATM 3 C C13 TK2 . . . C 2 -1.859 -9.651 16.127 1 81.88 ? C13 TK2 201 A 1 HETATM 4 C C14 TK2 . . . C 2 -1.181 -10.372 14.984 1 84.78 ? C14 TK2 201 A 1 HETATM 5 C C15 TK2 . . . C 2 -1.88 -11.287 14.209 1 86.05 ? C15 TK2 201 A 1 HETATM 6 C C17 TK2 . . . C 2 0.094 -11.78 12.937 1 86.48 ? C17 TK2 201 A 1 HETATM 7 C C19 TK2 . . . C 2 0.167 -10.163 14.706 1 86.36 ? C19 TK2 201 A 1 HETATM 8 C C20 TK2 . . . C 2 -6.703 -8.548 24.508 1 47.12 ? C20 TK2 201 A 1 HETATM 9 C C21 TK2 . . . C 2 -7.845 -8.388 25.272 1 45.6 ? C21 TK2 201 A 1 HETATM 10 C C23 TK2 . . . C 2 -9.076 -9.77 23.733 1 43.07 ? C23 TK2 201 A 1 HETATM 11 C C24 TK2 . . . C 2 -10.361 -10.445 23.395 1 41.08 ? C24 TK2 201 A 1 HETATM 12 C C25 TK2 . . . C 2 -10.414 -11.825 23.201 1 40.57 ? C25 TK2 201 A 1 HETATM 13 C C27 TK2 . . . C 2 -12.757 -11.706 22.71 1 39.75 ? C27 TK2 201 A 1 HETATM 14 C C28 TK2 . . . C 2 -12.723 -10.341 22.901 1 39.73 ? C28 TK2 201 A 1 HETATM 15 C C29 TK2 . . . C 2 -11.536 -9.712 23.238 1 40.14 ? C29 TK2 201 A 1 HETATM 16 N N1 TK2 . . . C 2 1.684 -11.615 18.399 1 76.77 ? N1 TK2 201 A 1 HETATM 17 C C8 TK2 . . . C 2 1.57 -10.294 19.042 1 76.52 ? C8 TK2 201 A 1 HETATM 18 C C7 TK2 . . . C 2 0.404 -10.114 19.979 1 76.49 ? C7 TK2 201 A 1 HETATM 19 C C6 TK2 . . . C 2 -0.897 -9.69 19.75 1 76.31 ? C6 TK2 201 A 1 HETATM 20 N N3 TK2 . . . C 2 -1.571 -9.365 18.578 1 78.92 ? N3 TK2 201 A 1 HETATM 21 C C18 TK2 . . . C 2 0.8 -10.868 13.694 1 86.36 ? C18 TK2 201 A 1 HETATM 22 C C16 TK2 . . . C 2 -1.246 -11.986 13.192 1 86.48 ? C16 TK2 201 A 1 HETATM 23 N N2 TK2 . . . C 2 0.618 -10.371 21.307 1 76.23 ? N2 TK2 201 A 1 HETATM 24 C C9 TK2 . . . C 2 -0.532 -10.096 21.915 1 74.68 ? C9 TK2 201 A 1 HETATM 25 N N TK2 . . . C 2 -1.499 -9.664 21.007 1 73.9 ? N TK2 201 A 1 HETATM 26 C C5 TK2 . . . C 2 -2.773 -9.29 21.408 1 69.83 ? C5 TK2 201 A 1 HETATM 27 C C10 TK2 . . . C 2 -0.88 -10.162 23.289 1 72.22 ? C10 TK2 201 A 1 HETATM 28 C C4 TK2 . . . C 2 -3.078 -9.352 22.713 1 66.45 ? C4 TK2 201 A 1 HETATM 29 O O TK2 . . . C 2 -4.318 -8.974 23.205 1 58.43 ? O TK2 201 A 1 HETATM 30 C C3 TK2 . . . C 2 -5.486 -9.477 22.508 1 52.24 ? C3 TK2 201 A 1 HETATM 31 C C2 TK2 . . . C 2 -6.73 -9.31 23.341 1 48.42 ? C2 TK2 201 A 1 HETATM 32 C C22 TK2 . . . C 2 -9.028 -8.994 24.891 1 44.02 ? C22 TK2 201 A 1 HETATM 33 C C1 TK2 . . . C 2 -7.924 -9.922 22.932 1 45.01 ? C1 TK2 201 A 1 HETATM 34 C C TK2 . . . C 2 -7.974 -10.698 21.64 1 45.91 ? C TK2 201 A 1 HETATM 35 C C26 TK2 . . . C 2 -11.603 -12.446 22.856 1 39.93 ? C26 TK2 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #