data_7BF4
#
_model_server_result.job_id            XFENnQ1qADuB2VuYOqOx0A 
_model_server_result.datetime_utc      '2024-11-08 18:10:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bf4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":208}' 
#
_entry.id    7BF4 
#
_exptl.entry_id    7BF4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7BF4 
_cell.length_a            72.529 
_cell.length_b            72.529 
_cell.length_c            33.346 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BF4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 123 n n 
C1 C2 EDO sing 124 n n 
C1 H11 EDO sing 125 n n 
C1 H12 EDO sing 126 n n 
O1 HO1 EDO sing 127 n n 
C2 O2 EDO sing 128 n n 
C2 H21 EDO sing 129 n n 
C2 H22 EDO sing 130 n n 
O2 HO2 EDO sing 131 n n 
#
_atom_sites.entry_id                     7BF4 
_atom_sites.fract_transf_matrix[1][1]    0.013788 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013788 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029989 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 5GP A 1 201 1 5GP 5GP . 
C 3 EDO A 1 202 1 EDO EDO . 
D 3 EDO A 1 203 2 EDO EDO . 
E 3 EDO A 1 204 3 EDO EDO . 
F 3 EDO A 1 205 4 EDO EDO . 
G 3 EDO A 1 206 5 EDO EDO . 
H 3 EDO A 1 207 6 EDO EDO . 
I 3 EDO A 1 208 8 EDO EDO . 
J 3 EDO A 1 209 10 EDO EDO . 
K 3 EDO A 1 210 11 EDO EDO . 
L 4 HOH A 1 301 2 HOH HOH . 
L 4 HOH A 2 302 102 HOH HOH . 
L 4 HOH A 3 303 218 HOH HOH . 
L 4 HOH A 4 304 227 HOH HOH . 
L 4 HOH A 5 305 253 HOH HOH . 
L 4 HOH A 6 306 241 HOH HOH . 
L 4 HOH A 7 307 243 HOH HOH . 
L 4 HOH A 8 308 171 HOH HOH . 
L 4 HOH A 9 309 162 HOH HOH . 
L 4 HOH A 10 310 150 HOH HOH . 
L 4 HOH A 11 311 108 HOH HOH . 
L 4 HOH A 12 312 81 HOH HOH . 
L 4 HOH A 13 313 155 HOH HOH . 
L 4 HOH A 14 314 249 HOH HOH . 
L 4 HOH A 15 315 54 HOH HOH . 
L 4 HOH A 16 316 41 HOH HOH . 
L 4 HOH A 17 317 27 HOH HOH . 
L 4 HOH A 18 318 255 HOH HOH . 
L 4 HOH A 19 319 219 HOH HOH . 
L 4 HOH A 20 320 153 HOH HOH . 
L 4 HOH A 21 321 132 HOH HOH . 
L 4 HOH A 22 322 116 HOH HOH . 
L 4 HOH A 23 323 24 HOH HOH . 
L 4 HOH A 24 324 84 HOH HOH . 
L 4 HOH A 25 325 143 HOH HOH . 
L 4 HOH A 26 326 226 HOH HOH . 
L 4 HOH A 27 327 13 HOH HOH . 
L 4 HOH A 28 328 186 HOH HOH . 
L 4 HOH A 29 329 230 HOH HOH . 
L 4 HOH A 30 330 51 HOH HOH . 
L 4 HOH A 31 331 244 HOH HOH . 
L 4 HOH A 32 332 69 HOH HOH . 
L 4 HOH A 33 333 111 HOH HOH . 
L 4 HOH A 34 334 213 HOH HOH . 
L 4 HOH A 35 335 61 HOH HOH . 
L 4 HOH A 36 336 221 HOH HOH . 
L 4 HOH A 37 337 242 HOH HOH . 
L 4 HOH A 38 338 59 HOH HOH . 
L 4 HOH A 39 339 33 HOH HOH . 
L 4 HOH A 40 340 105 HOH HOH . 
L 4 HOH A 41 341 39 HOH HOH . 
L 4 HOH A 42 342 45 HOH HOH . 
L 4 HOH A 43 343 117 HOH HOH . 
L 4 HOH A 44 344 125 HOH HOH . 
L 4 HOH A 45 345 131 HOH HOH . 
L 4 HOH A 46 346 66 HOH HOH . 
L 4 HOH A 47 347 20 HOH HOH . 
L 4 HOH A 48 348 129 HOH HOH . 
L 4 HOH A 49 349 5 HOH HOH . 
L 4 HOH A 50 350 25 HOH HOH . 
L 4 HOH A 51 351 136 HOH HOH . 
L 4 HOH A 52 352 38 HOH HOH . 
L 4 HOH A 53 353 74 HOH HOH . 
L 4 HOH A 54 354 240 HOH HOH . 
L 4 HOH A 55 355 251 HOH HOH . 
L 4 HOH A 56 356 115 HOH HOH . 
L 4 HOH A 57 357 135 HOH HOH . 
L 4 HOH A 58 358 214 HOH HOH . 
L 4 HOH A 59 359 65 HOH HOH . 
L 4 HOH A 60 360 195 HOH HOH . 
L 4 HOH A 61 361 248 HOH HOH . 
L 4 HOH A 62 362 80 HOH HOH . 
L 4 HOH A 63 363 142 HOH HOH . 
L 4 HOH A 64 364 106 HOH HOH . 
L 4 HOH A 65 365 40 HOH HOH . 
L 4 HOH A 66 366 26 HOH HOH . 
L 4 HOH A 67 367 8 HOH HOH . 
L 4 HOH A 68 368 72 HOH HOH . 
L 4 HOH A 69 369 18 HOH HOH . 
L 4 HOH A 70 370 68 HOH HOH . 
L 4 HOH A 71 371 11 HOH HOH . 
L 4 HOH A 72 372 63 HOH HOH . 
L 4 HOH A 73 373 110 HOH HOH . 
L 4 HOH A 74 374 100 HOH HOH . 
L 4 HOH A 75 375 203 HOH HOH . 
L 4 HOH A 76 376 134 HOH HOH . 
L 4 HOH A 77 377 212 HOH HOH . 
L 4 HOH A 78 378 15 HOH HOH . 
L 4 HOH A 79 379 90 HOH HOH . 
L 4 HOH A 80 380 98 HOH HOH . 
L 4 HOH A 81 381 31 HOH HOH . 
L 4 HOH A 82 382 21 HOH HOH . 
L 4 HOH A 83 383 245 HOH HOH . 
L 4 HOH A 84 384 93 HOH HOH . 
L 4 HOH A 85 385 6 HOH HOH . 
L 4 HOH A 86 386 29 HOH HOH . 
L 4 HOH A 87 387 229 HOH HOH . 
L 4 HOH A 88 388 43 HOH HOH . 
L 4 HOH A 89 389 60 HOH HOH . 
L 4 HOH A 90 390 254 HOH HOH . 
L 4 HOH A 91 391 12 HOH HOH . 
L 4 HOH A 92 392 85 HOH HOH . 
L 4 HOH A 93 393 83 HOH HOH . 
L 4 HOH A 94 394 91 HOH HOH . 
L 4 HOH A 95 395 174 HOH HOH . 
L 4 HOH A 96 396 237 HOH HOH . 
L 4 HOH A 97 397 48 HOH HOH . 
L 4 HOH A 98 398 50 HOH HOH . 
L 4 HOH A 99 399 30 HOH HOH . 
L 4 HOH A 100 400 87 HOH HOH . 
L 4 HOH A 101 401 220 HOH HOH . 
L 4 HOH A 102 402 22 HOH HOH . 
L 4 HOH A 103 403 97 HOH HOH . 
L 4 HOH A 104 404 36 HOH HOH . 
L 4 HOH A 105 405 58 HOH HOH . 
L 4 HOH A 106 406 32 HOH HOH . 
L 4 HOH A 107 407 9 HOH HOH . 
L 4 HOH A 108 408 28 HOH HOH . 
L 4 HOH A 109 409 120 HOH HOH . 
L 4 HOH A 110 410 67 HOH HOH . 
L 4 HOH A 111 411 235 HOH HOH . 
L 4 HOH A 112 412 10 HOH HOH . 
L 4 HOH A 113 413 35 HOH HOH . 
L 4 HOH A 114 414 138 HOH HOH . 
L 4 HOH A 115 415 122 HOH HOH . 
L 4 HOH A 116 416 57 HOH HOH . 
L 4 HOH A 117 417 198 HOH HOH . 
L 4 HOH A 118 418 147 HOH HOH . 
L 4 HOH A 119 419 7 HOH HOH . 
L 4 HOH A 120 420 222 HOH HOH . 
L 4 HOH A 121 421 216 HOH HOH . 
L 4 HOH A 122 422 145 HOH HOH . 
L 4 HOH A 123 423 37 HOH HOH . 
L 4 HOH A 124 424 89 HOH HOH . 
L 4 HOH A 125 425 233 HOH HOH . 
L 4 HOH A 126 426 56 HOH HOH . 
L 4 HOH A 127 427 211 HOH HOH . 
L 4 HOH A 128 428 4 HOH HOH . 
L 4 HOH A 129 429 52 HOH HOH . 
L 4 HOH A 130 430 154 HOH HOH . 
L 4 HOH A 131 431 46 HOH HOH . 
L 4 HOH A 132 432 73 HOH HOH . 
L 4 HOH A 133 433 49 HOH HOH . 
L 4 HOH A 134 434 62 HOH HOH . 
L 4 HOH A 135 435 44 HOH HOH . 
L 4 HOH A 136 436 75 HOH HOH . 
L 4 HOH A 137 437 193 HOH HOH . 
L 4 HOH A 138 438 94 HOH HOH . 
L 4 HOH A 139 439 17 HOH HOH . 
L 4 HOH A 140 440 70 HOH HOH . 
L 4 HOH A 141 441 79 HOH HOH . 
L 4 HOH A 142 442 234 HOH HOH . 
L 4 HOH A 143 443 19 HOH HOH . 
L 4 HOH A 144 444 34 HOH HOH . 
L 4 HOH A 145 445 250 HOH HOH . 
L 4 HOH A 146 446 53 HOH HOH . 
L 4 HOH A 147 447 163 HOH HOH . 
L 4 HOH A 148 448 103 HOH HOH . 
L 4 HOH A 149 449 126 HOH HOH . 
L 4 HOH A 150 450 169 HOH HOH . 
L 4 HOH A 151 451 157 HOH HOH . 
L 4 HOH A 152 452 47 HOH HOH . 
L 4 HOH A 153 453 225 HOH HOH . 
L 4 HOH A 154 454 231 HOH HOH . 
L 4 HOH A 155 455 88 HOH HOH . 
L 4 HOH A 156 456 183 HOH HOH . 
L 4 HOH A 157 457 228 HOH HOH . 
L 4 HOH A 158 458 14 HOH HOH . 
L 4 HOH A 159 459 78 HOH HOH . 
L 4 HOH A 160 460 149 HOH HOH . 
L 4 HOH A 161 461 95 HOH HOH . 
L 4 HOH A 162 462 247 HOH HOH . 
L 4 HOH A 163 463 238 HOH HOH . 
L 4 HOH A 164 464 236 HOH HOH . 
L 4 HOH A 165 465 217 HOH HOH . 
L 4 HOH A 166 466 77 HOH HOH . 
L 4 HOH A 167 467 86 HOH HOH . 
L 4 HOH A 168 468 180 HOH HOH . 
L 4 HOH A 169 469 109 HOH HOH . 
L 4 HOH A 170 470 239 HOH HOH . 
L 4 HOH A 171 471 200 HOH HOH . 
L 4 HOH A 172 472 175 HOH HOH . 
L 4 HOH A 173 473 113 HOH HOH . 
L 4 HOH A 174 474 185 HOH HOH . 
L 4 HOH A 175 475 224 HOH HOH . 
L 4 HOH A 176 476 139 HOH HOH . 
L 4 HOH A 177 477 92 HOH HOH . 
L 4 HOH A 178 478 252 HOH HOH . 
L 4 HOH A 179 479 196 HOH HOH . 
L 4 HOH A 180 480 232 HOH HOH . 
L 4 HOH A 181 481 76 HOH HOH . 
L 4 HOH A 182 482 118 HOH HOH . 
L 4 HOH A 183 483 199 HOH HOH . 
L 4 HOH A 184 484 223 HOH HOH . 
L 4 HOH A 185 485 96 HOH HOH . 
L 4 HOH A 186 486 201 HOH HOH . 
L 4 HOH A 187 487 208 HOH HOH . 
L 4 HOH A 188 488 42 HOH HOH . 
L 4 HOH A 189 489 144 HOH HOH . 
L 4 HOH A 190 490 107 HOH HOH . 
L 4 HOH A 191 491 246 HOH HOH . 
L 4 HOH A 192 492 104 HOH HOH . 
L 4 HOH A 193 493 159 HOH HOH . 
L 4 HOH A 194 494 55 HOH HOH . 
L 4 HOH A 195 495 119 HOH HOH . 
L 4 HOH A 196 496 71 HOH HOH . 
L 4 HOH A 197 497 156 HOH HOH . 
L 4 HOH A 198 498 99 HOH HOH . 
L 4 HOH A 199 499 194 HOH HOH . 
L 4 HOH A 200 500 207 HOH HOH . 
L 4 HOH A 201 501 146 HOH HOH . 
L 4 HOH A 202 502 127 HOH HOH . 
L 4 HOH A 203 503 112 HOH HOH . 
L 4 HOH A 204 504 114 HOH HOH . 
L 4 HOH A 205 505 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . I 3 -9.579 35.341 3.247 1 28.04 ? C1 EDO 208 A 1 
HETATM 2 O O1 EDO . . . I 3 -9.776 36.491 2.412 1 29.64 ? O1 EDO 208 A 1 
HETATM 3 C C2 EDO . . . I 3 -8.206 34.772 3.227 1 25.55 ? C2 EDO 208 A 1 
HETATM 4 O O2 EDO . . . I 3 -7.232 35.756 3.018 1 20.05 ? O2 EDO 208 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#