data_7BGZ # _model_server_result.job_id eeP-Bsk-50T0egvT5pDYPg _model_server_result.datetime_utc '2025-07-08 01:18:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bgz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7BGZ # _exptl.entry_id 7BGZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7BGZ _cell.length_a 53.56 _cell.length_b 53.56 _cell.length_c 110.88 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BGZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 0 36.96 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 66 AAA CYS 66 1_555 A SG CYS 160 AAA CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 106 AAA CYS 106 1_555 A SG CYS 119 AAA CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 114 n n C1 C2 EDO sing 115 n n C1 H11 EDO sing 116 n n C1 H12 EDO sing 117 n n O1 HO1 EDO sing 118 n n C2 O2 EDO sing 119 n n C2 H21 EDO sing 120 n n C2 H22 EDO sing 121 n n O2 HO2 EDO sing 122 n n # _atom_sites.entry_id 7BGZ _atom_sites.fract_transf_matrix[1][1] 0.018671 _atom_sites.fract_transf_matrix[1][2] 0.01078 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021559 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009019 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DKA AAA 1 201 201 DKA DKA . C 3 EDO AAA 1 202 301 EDO EDO . D 4 HOH AAA 1 301 48 HOH HOH . D 4 HOH AAA 2 302 28 HOH HOH . D 4 HOH AAA 3 303 2 HOH HOH . D 4 HOH AAA 4 304 32 HOH HOH . D 4 HOH AAA 5 305 58 HOH HOH . D 4 HOH AAA 6 306 34 HOH HOH . D 4 HOH AAA 7 307 22 HOH HOH . D 4 HOH AAA 8 308 60 HOH HOH . D 4 HOH AAA 9 309 59 HOH HOH . D 4 HOH AAA 10 310 19 HOH HOH . D 4 HOH AAA 11 311 12 HOH HOH . D 4 HOH AAA 12 312 7 HOH HOH . D 4 HOH AAA 13 313 23 HOH HOH . D 4 HOH AAA 14 314 9 HOH HOH . D 4 HOH AAA 15 315 42 HOH HOH . D 4 HOH AAA 16 316 29 HOH HOH . D 4 HOH AAA 17 317 3 HOH HOH . D 4 HOH AAA 18 318 8 HOH HOH . D 4 HOH AAA 19 319 24 HOH HOH . D 4 HOH AAA 20 320 39 HOH HOH . D 4 HOH AAA 21 321 31 HOH HOH . D 4 HOH AAA 22 322 18 HOH HOH . D 4 HOH AAA 23 323 6 HOH HOH . D 4 HOH AAA 24 324 35 HOH HOH . D 4 HOH AAA 25 325 11 HOH HOH . D 4 HOH AAA 26 326 57 HOH HOH . D 4 HOH AAA 27 327 45 HOH HOH . D 4 HOH AAA 28 328 52 HOH HOH . D 4 HOH AAA 29 329 15 HOH HOH . D 4 HOH AAA 30 330 47 HOH HOH . D 4 HOH AAA 31 331 37 HOH HOH . D 4 HOH AAA 32 332 56 HOH HOH . D 4 HOH AAA 33 333 4 HOH HOH . D 4 HOH AAA 34 334 36 HOH HOH . D 4 HOH AAA 35 335 41 HOH HOH . D 4 HOH AAA 36 336 46 HOH HOH . D 4 HOH AAA 37 337 13 HOH HOH . D 4 HOH AAA 38 338 43 HOH HOH . D 4 HOH AAA 39 339 10 HOH HOH . D 4 HOH AAA 40 340 30 HOH HOH . D 4 HOH AAA 41 341 40 HOH HOH . D 4 HOH AAA 42 342 61 HOH HOH . D 4 HOH AAA 43 343 53 HOH HOH . D 4 HOH AAA 44 344 33 HOH HOH . D 4 HOH AAA 45 345 5 HOH HOH . D 4 HOH AAA 46 346 62 HOH HOH . D 4 HOH AAA 47 347 27 HOH HOH . D 4 HOH AAA 48 348 44 HOH HOH . D 4 HOH AAA 49 349 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 17.222 -7.697 50.449 1 72.43 0 C1 EDO 202 AAA 1 HETATM 2 O O1 EDO . . . C 3 16.148 -7.284 49.635 1 70.31 0 O1 EDO 202 AAA 1 HETATM 3 C C2 EDO . . . C 3 18.293 -6.695 50.414 1 71.38 0 C2 EDO 202 AAA 1 HETATM 4 O O2 EDO . . . C 3 18.591 -6.157 51.68 1 74.29 0 O2 EDO 202 AAA 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #