data_7BHM
#
_model_server_result.job_id            4r8vQwQxEhvWxWNvWr1mjA 
_model_server_result.datetime_utc      '2025-01-10 14:55:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bhm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    7BHM 
#
_exptl.entry_id    7BHM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-alpha-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7BHM 
_cell.length_a            78.804 
_cell.length_b            78.804 
_cell.length_c            38.002 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BHM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    'P 4nw 2abw' 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc1 A O SER 60 A SER 60 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc2 A O CYS 64 A CYS 64 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc3 A OG SER 72 A SER 72 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? 
metalc ? metalc4 A O ARG 73 A ARG 73 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? 
metalc ? metalc5 G NA NA . A NA 206 1_555 H O HOH . A HOH 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc6 G NA NA . A NA 206 1_555 H O HOH . A HOH 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NDG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-alpha-D-glucopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     N-acetyl-alpha-D-glucosamine;2-acetamido-2-deoxy-alpha-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NDG sing 237 n n 
C1 O5 NDG sing 238 n n 
C1 O1 NDG sing 239 n n 
C1 H1 NDG sing 240 n n 
C2 C3 NDG sing 241 n n 
C2 N2 NDG sing 242 n n 
C2 H2 NDG sing 243 n n 
C3 C4 NDG sing 244 n n 
C3 O3 NDG sing 245 n n 
C3 H3 NDG sing 246 n n 
C4 C5 NDG sing 247 n n 
C4 O4 NDG sing 248 n n 
C4 H4 NDG sing 249 n n 
C5 C6 NDG sing 250 n n 
C5 O5 NDG sing 251 n n 
C5 H5 NDG sing 252 n n 
C6 O6 NDG sing 253 n n 
C6 H61 NDG sing 254 n n 
C6 H62 NDG sing 255 n n 
C7 C8 NDG sing 256 n n 
C7 O7 NDG doub 257 n n 
C7 N2 NDG sing 258 n n 
C8 H81 NDG sing 259 n n 
C8 H82 NDG sing 260 n n 
C8 H83 NDG sing 261 n n 
O3 HO3 NDG sing 262 n n 
O4 HO4 NDG sing 263 n n 
O6 HO6 NDG sing 264 n n 
N2 HN2 NDG sing 265 n n 
O1 HO1 NDG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NDG DGlcpNAca 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NDG N-acetyl-a-D-glucopyranosamine 'COMMON NAME' GMML 1 
NDG a-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NDG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7BHM 
_atom_sites.fract_transf_matrix[1][1]    0.01269 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01269 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026314 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NDG A 1 201 201 NDG NDG . 
C 3 CL A 1 202 202 CL CL . 
D 3 CL A 1 203 203 CL CL . 
E 3 CL A 1 204 204 CL CL . 
F 3 CL A 1 205 205 CL CL . 
G 4 NA A 1 206 206 NA NA . 
H 5 HOH A 1 301 308 HOH HOH . 
H 5 HOH A 2 302 344 HOH HOH . 
H 5 HOH A 3 303 331 HOH HOH . 
H 5 HOH A 4 304 329 HOH HOH . 
H 5 HOH A 5 305 347 HOH HOH . 
H 5 HOH A 6 306 354 HOH HOH . 
H 5 HOH A 7 307 370 HOH HOH . 
H 5 HOH A 8 308 333 HOH HOH . 
H 5 HOH A 9 309 345 HOH HOH . 
H 5 HOH A 10 310 316 HOH HOH . 
H 5 HOH A 11 311 303 HOH HOH . 
H 5 HOH A 12 312 350 HOH HOH . 
H 5 HOH A 13 313 301 HOH HOH . 
H 5 HOH A 14 314 313 HOH HOH . 
H 5 HOH A 15 315 379 HOH HOH . 
H 5 HOH A 16 316 305 HOH HOH . 
H 5 HOH A 17 317 322 HOH HOH . 
H 5 HOH A 18 318 319 HOH HOH . 
H 5 HOH A 19 319 371 HOH HOH . 
H 5 HOH A 20 320 361 HOH HOH . 
H 5 HOH A 21 321 353 HOH HOH . 
H 5 HOH A 22 322 339 HOH HOH . 
H 5 HOH A 23 323 314 HOH HOH . 
H 5 HOH A 24 324 325 HOH HOH . 
H 5 HOH A 25 325 334 HOH HOH . 
H 5 HOH A 26 326 362 HOH HOH . 
H 5 HOH A 27 327 327 HOH HOH . 
H 5 HOH A 28 328 317 HOH HOH . 
H 5 HOH A 29 329 321 HOH HOH . 
H 5 HOH A 30 330 330 HOH HOH . 
H 5 HOH A 31 331 302 HOH HOH . 
H 5 HOH A 32 332 373 HOH HOH . 
H 5 HOH A 33 333 358 HOH HOH . 
H 5 HOH A 34 334 340 HOH HOH . 
H 5 HOH A 35 335 315 HOH HOH . 
H 5 HOH A 36 336 323 HOH HOH . 
H 5 HOH A 37 337 320 HOH HOH . 
H 5 HOH A 38 338 307 HOH HOH . 
H 5 HOH A 39 339 309 HOH HOH . 
H 5 HOH A 40 340 335 HOH HOH . 
H 5 HOH A 41 341 381 HOH HOH . 
H 5 HOH A 42 342 332 HOH HOH . 
H 5 HOH A 43 343 360 HOH HOH . 
H 5 HOH A 44 344 304 HOH HOH . 
H 5 HOH A 45 345 364 HOH HOH . 
H 5 HOH A 46 346 363 HOH HOH . 
H 5 HOH A 47 347 346 HOH HOH . 
H 5 HOH A 48 348 342 HOH HOH . 
H 5 HOH A 49 349 348 HOH HOH . 
H 5 HOH A 50 350 380 HOH HOH . 
H 5 HOH A 51 351 367 HOH HOH . 
H 5 HOH A 52 352 383 HOH HOH . 
H 5 HOH A 53 353 356 HOH HOH . 
H 5 HOH A 54 354 328 HOH HOH . 
H 5 HOH A 55 355 336 HOH HOH . 
H 5 HOH A 56 356 343 HOH HOH . 
H 5 HOH A 57 357 311 HOH HOH . 
H 5 HOH A 58 358 351 HOH HOH . 
H 5 HOH A 59 359 349 HOH HOH . 
H 5 HOH A 60 360 377 HOH HOH . 
H 5 HOH A 61 361 382 HOH HOH . 
H 5 HOH A 62 362 376 HOH HOH . 
H 5 HOH A 63 363 326 HOH HOH . 
H 5 HOH A 64 364 310 HOH HOH . 
H 5 HOH A 65 365 318 HOH HOH . 
H 5 HOH A 66 366 306 HOH HOH . 
H 5 HOH A 67 367 338 HOH HOH . 
H 5 HOH A 68 368 337 HOH HOH . 
H 5 HOH A 69 369 312 HOH HOH . 
H 5 HOH A 70 370 324 HOH HOH . 
H 5 HOH A 71 371 369 HOH HOH . 
H 5 HOH A 72 372 352 HOH HOH . 
H 5 HOH A 73 373 366 HOH HOH . 
H 5 HOH A 74 374 375 HOH HOH . 
H 5 HOH A 75 375 372 HOH HOH . 
H 5 HOH A 76 376 341 HOH HOH . 
H 5 HOH A 77 377 368 HOH HOH . 
H 5 HOH A 78 378 378 HOH HOH . 
H 5 HOH A 79 379 355 HOH HOH . 
H 5 HOH A 80 380 359 HOH HOH . 
H 5 HOH A 81 381 357 HOH HOH . 
H 5 HOH A 82 382 365 HOH HOH . 
H 5 HOH A 83 383 374 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NDG . . . B 2 5.948 24.168 2.868 0.71 25.81 ? C1 NDG 201 A 1 
HETATM 2 C C2 NDG . . . B 2 5.82 23.836 4.353 0.71 26.11 ? C2 NDG 201 A 1 
HETATM 3 C C3 NDG . . . B 2 6.726 24.751 5.177 0.71 25.24 ? C3 NDG 201 A 1 
HETATM 4 C C4 NDG . . . B 2 8.155 24.725 4.651 0.71 35.39 ? C4 NDG 201 A 1 
HETATM 5 C C5 NDG . . . B 2 8.165 25.031 3.158 0.71 31.9 ? C5 NDG 201 A 1 
HETATM 6 C C6 NDG . . . B 2 9.543 24.916 2.546 0.71 35.65 ? C6 NDG 201 A 1 
HETATM 7 C C7 NDG . . . B 2 3.773 23.088 5.532 0.71 29.62 ? C7 NDG 201 A 1 
HETATM 8 C C8 NDG . . . B 2 2.336 23.409 5.817 0.71 24.78 ? C8 NDG 201 A 1 
HETATM 9 O O5 NDG . . . B 2 7.319 24.095 2.473 0.71 29.42 ? O5 NDG 201 A 1 
HETATM 10 O O3 NDG . . . B 2 6.71 24.356 6.546 0.71 25.74 ? O3 NDG 201 A 1 
HETATM 11 O O4 NDG . . . B 2 8.923 25.723 5.318 0.71 34.68 ? O4 NDG 201 A 1 
HETATM 12 O O6 NDG . . . B 2 9.551 25.321 1.184 0.71 33.2 ? O6 NDG 201 A 1 
HETATM 13 O O7 NDG . . . B 2 4.306 22.073 5.97 0.71 26.19 ? O7 NDG 201 A 1 
HETATM 14 N N2 NDG . . . B 2 4.433 23.98 4.777 0.71 28.6 ? N2 NDG 201 A 1 
HETATM 15 O O1 NDG . . . B 2 5.477 25.463 2.639 0.71 26.46 ? O1 NDG 201 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           222 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           15 
#