data_7BI6
#
_model_server_result.job_id            KnmYNqB-0VIV-kM3kND9vg 
_model_server_result.datetime_utc      '2024-11-20 03:39:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bi6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1101}' 
#
_entry.id    7BI6 
#
_exptl.entry_id    7BI6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7BI6 
_cell.length_a            56.124 
_cell.length_b            133.371 
_cell.length_c            152.709 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BI6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 651 A GLU 759 1_555 G MG MG . A MG 1106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc2 A OD1 ASP 778 A ASP 886 1_555 G MG MG . A MG 1106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? 
metalc ? metalc3 B O1B ATP . A ATP 1101 1_555 G MG MG . A MG 1106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     7BI6 
_atom_sites.fract_transf_matrix[1][1]    0.017818 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007498 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006548 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ATP A 1 1101 1101 ATP ATP . 
C 3 SO4 A 1 1102 1301 SO4 SO4 . 
D 3 SO4 A 1 1103 1601 SO4 SO4 . 
E 4 EDO A 1 1104 1701 EDO EDO . 
F 4 EDO A 1 1105 1801 EDO EDO . 
G 5 MG A 1 1106 1 MG MG . 
H 6 HOH A 1 1201 15 HOH HOH . 
H 6 HOH A 2 1202 75 HOH HOH . 
H 6 HOH A 3 1203 13 HOH HOH . 
H 6 HOH A 4 1204 12 HOH HOH . 
H 6 HOH A 5 1205 73 HOH HOH . 
H 6 HOH A 6 1206 4 HOH HOH . 
H 6 HOH A 7 1207 25 HOH HOH . 
H 6 HOH A 8 1208 35 HOH HOH . 
H 6 HOH A 9 1209 39 HOH HOH . 
H 6 HOH A 10 1210 81 HOH HOH . 
H 6 HOH A 11 1211 43 HOH HOH . 
H 6 HOH A 12 1212 54 HOH HOH . 
H 6 HOH A 13 1213 22 HOH HOH . 
H 6 HOH A 14 1214 77 HOH HOH . 
H 6 HOH A 15 1215 7 HOH HOH . 
H 6 HOH A 16 1216 58 HOH HOH . 
H 6 HOH A 17 1217 89 HOH HOH . 
H 6 HOH A 18 1218 70 HOH HOH . 
H 6 HOH A 19 1219 34 HOH HOH . 
H 6 HOH A 20 1220 44 HOH HOH . 
H 6 HOH A 21 1221 38 HOH HOH . 
H 6 HOH A 22 1222 6 HOH HOH . 
H 6 HOH A 23 1223 26 HOH HOH . 
H 6 HOH A 24 1224 14 HOH HOH . 
H 6 HOH A 25 1225 37 HOH HOH . 
H 6 HOH A 26 1226 18 HOH HOH . 
H 6 HOH A 27 1227 27 HOH HOH . 
H 6 HOH A 28 1228 46 HOH HOH . 
H 6 HOH A 29 1229 41 HOH HOH . 
H 6 HOH A 30 1230 62 HOH HOH . 
H 6 HOH A 31 1231 21 HOH HOH . 
H 6 HOH A 32 1232 2 HOH HOH . 
H 6 HOH A 33 1233 50 HOH HOH . 
H 6 HOH A 34 1234 42 HOH HOH . 
H 6 HOH A 35 1235 90 HOH HOH . 
H 6 HOH A 36 1236 55 HOH HOH . 
H 6 HOH A 37 1237 9 HOH HOH . 
H 6 HOH A 38 1238 82 HOH HOH . 
H 6 HOH A 39 1239 52 HOH HOH . 
H 6 HOH A 40 1240 49 HOH HOH . 
H 6 HOH A 41 1241 33 HOH HOH . 
H 6 HOH A 42 1242 53 HOH HOH . 
H 6 HOH A 43 1243 17 HOH HOH . 
H 6 HOH A 44 1244 45 HOH HOH . 
H 6 HOH A 45 1245 29 HOH HOH . 
H 6 HOH A 46 1246 83 HOH HOH . 
H 6 HOH A 47 1247 78 HOH HOH . 
H 6 HOH A 48 1248 16 HOH HOH . 
H 6 HOH A 49 1249 76 HOH HOH . 
H 6 HOH A 50 1250 93 HOH HOH . 
H 6 HOH A 51 1251 87 HOH HOH . 
H 6 HOH A 52 1252 86 HOH HOH . 
H 6 HOH A 53 1253 51 HOH HOH . 
H 6 HOH A 54 1254 96 HOH HOH . 
H 6 HOH A 55 1255 48 HOH HOH . 
H 6 HOH A 56 1256 28 HOH HOH . 
H 6 HOH A 57 1257 61 HOH HOH . 
H 6 HOH A 58 1258 80 HOH HOH . 
H 6 HOH A 59 1259 40 HOH HOH . 
H 6 HOH A 60 1260 30 HOH HOH . 
H 6 HOH A 61 1261 64 HOH HOH . 
H 6 HOH A 62 1262 31 HOH HOH . 
H 6 HOH A 63 1263 68 HOH HOH . 
H 6 HOH A 64 1264 72 HOH HOH . 
H 6 HOH A 65 1265 91 HOH HOH . 
H 6 HOH A 66 1266 56 HOH HOH . 
H 6 HOH A 67 1267 88 HOH HOH . 
H 6 HOH A 68 1268 47 HOH HOH . 
H 6 HOH A 69 1269 92 HOH HOH . 
H 6 HOH A 70 1270 3 HOH HOH . 
H 6 HOH A 71 1271 36 HOH HOH . 
H 6 HOH A 72 1272 20 HOH HOH . 
H 6 HOH A 73 1273 84 HOH HOH . 
H 6 HOH A 74 1274 79 HOH HOH . 
H 6 HOH A 75 1275 74 HOH HOH . 
H 6 HOH A 76 1276 65 HOH HOH . 
H 6 HOH A 77 1277 69 HOH HOH . 
H 6 HOH A 78 1278 66 HOH HOH . 
H 6 HOH A 79 1279 85 HOH HOH . 
H 6 HOH A 80 1280 19 HOH HOH . 
H 6 HOH A 81 1281 63 HOH HOH . 
H 6 HOH A 82 1282 59 HOH HOH . 
H 6 HOH A 83 1283 67 HOH HOH . 
H 6 HOH A 84 1284 71 HOH HOH . 
H 6 HOH A 85 1285 95 HOH HOH . 
H 6 HOH A 86 1286 94 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . B 2 -15.264 -1.761 -23.995 1 109.29 ? PG ATP 1101 A 1 
HETATM 2 O O1G ATP . . . B 2 -14.217 -2.848 -24.044 1 109.22 ? O1G ATP 1101 A 1 
HETATM 3 O O2G ATP . . . B 2 -15.723 -1.334 -25.368 1 109.12 ? O2G ATP 1101 A 1 
HETATM 4 O O3G ATP . . . B 2 -16.413 -2.099 -23.076 1 108.44 ? O3G ATP 1101 A 1 
HETATM 5 P PB ATP . . . B 2 -13.032 0.06 -23.401 1 102.88 ? PB ATP 1101 A 1 
HETATM 6 O O1B ATP . . . B 2 -12.332 -0.595 -24.546 1 103.06 ? O1B ATP 1101 A 1 
HETATM 7 O O2B ATP . . . B 2 -13.048 1.55 -23.303 1 102.21 ? O2B ATP 1101 A 1 
HETATM 8 O O3B ATP . . . B 2 -14.541 -0.472 -23.348 1 105.8 ? O3B ATP 1101 A 1 
HETATM 9 P PA ATP . . . B 2 -11.594 -1.851 -21.696 1 93.5 ? PA ATP 1101 A 1 
HETATM 10 O O1A ATP . . . B 2 -10.428 -1.909 -22.628 1 92.69 ? O1A ATP 1101 A 1 
HETATM 11 O O2A ATP . . . B 2 -12.507 -3.03 -21.634 1 93.27 ? O2A ATP 1101 A 1 
HETATM 12 O O3A ATP . . . B 2 -12.457 -0.541 -22.033 1 98.07 ? O3A ATP 1101 A 1 
HETATM 13 O O5' ATP . . . B 2 -11.073 -1.506 -20.219 1 89.13 ? O5' ATP 1101 A 1 
HETATM 14 C C5' ATP . . . B 2 -12.017 -1.543 -19.119 1 84.74 ? C5' ATP 1101 A 1 
HETATM 15 C C4' ATP . . . B 2 -11.58 -0.568 -18.054 1 81.71 ? C4' ATP 1101 A 1 
HETATM 16 O O4' ATP . . . B 2 -10.227 -0.88 -17.64 1 79.74 ? O4' ATP 1101 A 1 
HETATM 17 C C3' ATP . . . B 2 -11.517 0.905 -18.468 1 80.05 ? C3' ATP 1101 A 1 
HETATM 18 O O3' ATP . . . B 2 -12.79 1.527 -18.356 1 80.19 ? O3' ATP 1101 A 1 
HETATM 19 C C2' ATP . . . B 2 -10.513 1.469 -17.46 1 79.05 ? C2' ATP 1101 A 1 
HETATM 20 O O2' ATP . . . B 2 -11.121 1.821 -16.237 1 78.78 ? O2' ATP 1101 A 1 
HETATM 21 C C1' ATP . . . B 2 -9.546 0.3 -17.272 1 78.35 ? C1' ATP 1101 A 1 
HETATM 22 N N9 ATP . . . B 2 -8.329 0.4 -18.079 1 76.8 ? N9 ATP 1101 A 1 
HETATM 23 C C8 ATP . . . B 2 -8.161 0.065 -19.403 1 75.89 ? C8 ATP 1101 A 1 
HETATM 24 N N7 ATP . . . B 2 -6.935 0.273 -19.825 1 74.99 ? N7 ATP 1101 A 1 
HETATM 25 C C5 ATP . . . B 2 -6.261 0.773 -18.717 1 74.68 ? C5 ATP 1101 A 1 
HETATM 26 C C6 ATP . . . B 2 -4.929 1.189 -18.517 1 73.88 ? C6 ATP 1101 A 1 
HETATM 27 N N6 ATP . . . B 2 -3.996 1.165 -19.464 1 73.2 ? N6 ATP 1101 A 1 
HETATM 28 N N1 ATP . . . B 2 -4.594 1.634 -17.282 1 73.39 ? N1 ATP 1101 A 1 
HETATM 29 C C2 ATP . . . B 2 -5.538 1.655 -16.33 1 73.4 ? C2 ATP 1101 A 1 
HETATM 30 N N3 ATP . . . B 2 -6.816 1.289 -16.403 1 74.43 ? N3 ATP 1101 A 1 
HETATM 31 C C4 ATP . . . B 2 -7.115 0.853 -17.638 1 75.35 ? C4 ATP 1101 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           31 
#