data_7BIB
#
_model_server_result.job_id            NRgtEwxBEpYs9KR2XkuH4g 
_model_server_result.datetime_utc      '2025-02-27 21:27:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bib 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    7BIB 
#
_exptl.entry_id    7BIB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              450.573 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{R})-2-azanyl-5-[[(2~{R})-3-(hexylcarbamothioylsulfanyl)-1-(2-hydroxy-2-oxoethylamino)-1-oxidanylidene-propan-2-yl]amino]-5-oxidanylidene-pentanoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93.185 
_cell.angle_gamma         90 
_cell.entry_id            7BIB 
_cell.length_a            99.638 
_cell.length_b            93.222 
_cell.length_c            51.524 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BIB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C17 H30 N4 O6 S2' 
_chem_comp.formula_weight    450.573 
_chem_comp.id                TZ8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{R})-2-azanyl-5-[[(2~{R})-3-(hexylcarbamothioylsulfanyl)-1-(2-hydroxy-2-oxoethylamino)-1-oxidanylidene-propan-2-yl]amino]-5-oxidanylidene-pentanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O4 C16 TZ8 doub 358 n n 
O5 C16 TZ8 sing 359 n n 
C16 C15 TZ8 sing 360 n n 
C1 C TZ8 sing 361 n n 
C1 C2 TZ8 sing 362 n n 
C15 C TZ8 sing 363 n n 
C15 N3 TZ8 sing 364 n n 
N C2 TZ8 sing 365 n n 
N C3 TZ8 sing 366 n n 
S C4 TZ8 sing 367 n n 
S C5 TZ8 sing 368 n n 
C4 C3 TZ8 sing 369 n n 
C2 O TZ8 doub 370 n n 
O1 C12 TZ8 doub 371 n n 
C3 C12 TZ8 sing 372 n n 
N1 C6 TZ8 sing 373 n n 
N1 C5 TZ8 sing 374 n n 
C6 C7 TZ8 sing 375 n n 
C12 N2 TZ8 sing 376 n n 
C5 S1 TZ8 doub 377 n n 
C7 C8 TZ8 sing 378 n n 
N2 C13 TZ8 sing 379 n n 
C13 C14 TZ8 sing 380 n n 
C8 C9 TZ8 sing 381 n n 
C14 O2 TZ8 doub 382 n n 
C14 O3 TZ8 sing 383 n n 
C9 C10 TZ8 sing 384 n n 
C11 C10 TZ8 sing 385 n n 
N1 H1 TZ8 sing 386 n n 
C7 H2 TZ8 sing 387 n n 
C7 H3 TZ8 sing 388 n n 
C8 H4 TZ8 sing 389 n n 
C8 H5 TZ8 sing 390 n n 
N2 H6 TZ8 sing 391 n n 
C9 H7 TZ8 sing 392 n n 
C9 H8 TZ8 sing 393 n n 
C1 H9 TZ8 sing 394 n n 
C1 H10 TZ8 sing 395 n n 
O5 H11 TZ8 sing 396 n n 
C6 H12 TZ8 sing 397 n n 
C6 H13 TZ8 sing 398 n n 
N3 H14 TZ8 sing 399 n n 
N3 H15 TZ8 sing 400 n n 
C4 H17 TZ8 sing 401 n n 
C4 H18 TZ8 sing 402 n n 
C3 H19 TZ8 sing 403 n n 
O3 H20 TZ8 sing 404 n n 
N H21 TZ8 sing 405 n n 
C H22 TZ8 sing 406 n n 
C H23 TZ8 sing 407 n n 
C10 H24 TZ8 sing 408 n n 
C10 H25 TZ8 sing 409 n n 
C11 H26 TZ8 sing 410 n n 
C11 H27 TZ8 sing 411 n n 
C11 H28 TZ8 sing 412 n n 
C13 H29 TZ8 sing 413 n n 
C13 H30 TZ8 sing 414 n n 
C15 H31 TZ8 sing 415 n n 
#
_atom_sites.entry_id                     7BIB 
_atom_sites.fract_transf_matrix[1][1]    0.010036 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000558 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010727 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019438 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TZ8 A 1 301 301 TZ8 XXX . 
D 2 TZ8 B 1 301 301 TZ8 XXX . 
E 3 HOH A 1 401 9 HOH HOH . 
E 3 HOH A 2 402 5 HOH HOH . 
E 3 HOH A 3 403 16 HOH HOH . 
E 3 HOH A 4 404 40 HOH HOH . 
E 3 HOH A 5 405 7 HOH HOH . 
E 3 HOH A 6 406 13 HOH HOH . 
E 3 HOH A 7 407 24 HOH HOH . 
E 3 HOH A 8 408 26 HOH HOH . 
E 3 HOH A 9 409 23 HOH HOH . 
E 3 HOH A 10 410 15 HOH HOH . 
E 3 HOH A 11 411 28 HOH HOH . 
E 3 HOH A 12 412 39 HOH HOH . 
E 3 HOH A 13 413 22 HOH HOH . 
E 3 HOH A 14 414 50 HOH HOH . 
E 3 HOH A 15 415 36 HOH HOH . 
E 3 HOH A 16 416 19 HOH HOH . 
E 3 HOH A 17 417 18 HOH HOH . 
E 3 HOH A 18 418 2 HOH HOH . 
E 3 HOH A 19 419 35 HOH HOH . 
E 3 HOH A 20 420 41 HOH HOH . 
E 3 HOH A 21 421 33 HOH HOH . 
E 3 HOH A 22 422 21 HOH HOH . 
F 3 HOH B 1 401 12 HOH HOH . 
F 3 HOH B 2 402 32 HOH HOH . 
F 3 HOH B 3 403 20 HOH HOH . 
F 3 HOH B 4 404 8 HOH HOH . 
F 3 HOH B 5 405 42 HOH HOH . 
F 3 HOH B 6 406 6 HOH HOH . 
F 3 HOH B 7 407 29 HOH HOH . 
F 3 HOH B 8 408 17 HOH HOH . 
F 3 HOH B 9 409 10 HOH HOH . 
F 3 HOH B 10 410 30 HOH HOH . 
F 3 HOH B 11 411 14 HOH HOH . 
F 3 HOH B 12 412 27 HOH HOH . 
F 3 HOH B 13 413 1 HOH HOH . 
F 3 HOH B 14 414 3 HOH HOH . 
F 3 HOH B 15 415 45 HOH HOH . 
F 3 HOH B 16 416 34 HOH HOH . 
F 3 HOH B 17 417 46 HOH HOH . 
F 3 HOH B 18 418 25 HOH HOH . 
F 3 HOH B 19 419 47 HOH HOH . 
F 3 HOH B 20 420 11 HOH HOH . 
F 3 HOH B 21 421 31 HOH HOH . 
F 3 HOH B 22 422 4 HOH HOH . 
F 3 HOH B 23 423 44 HOH HOH . 
F 3 HOH B 24 424 48 HOH HOH . 
F 3 HOH B 25 425 43 HOH HOH . 
F 3 HOH B 26 426 38 HOH HOH . 
F 3 HOH B 27 427 49 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 TZ8 . . . D 2 21.296 -7.477 23.033 1 66.97 ? N1 TZ8 301 B 1 
HETATM 2 C C7 TZ8 . . . D 2 23.114 -8.214 24.535 1 72.2 ? C7 TZ8 301 B 1 
HETATM 3 C C8 TZ8 . . . D 2 22.752 -9.213 25.634 1 73.85 ? C8 TZ8 301 B 1 
HETATM 4 N N2 TZ8 . . . D 2 23.19 -12.053 21.584 1 58.66 ? N2 TZ8 301 B 1 
HETATM 5 C C9 TZ8 . . . D 2 21.718 -8.744 26.645 1 79.18 ? C9 TZ8 301 B 1 
HETATM 6 O O1 TZ8 . . . D 2 21.565 -12.811 20.251 1 57.73 ? O1 TZ8 301 B 1 
HETATM 7 C C1 TZ8 . . . D 2 21.791 -8.45 17.542 1 49.66 ? C1 TZ8 301 B 1 
HETATM 8 O O5 TZ8 . . . D 2 20.885 -5.697 14.902 1 49.66 ? O5 TZ8 301 B 1 
HETATM 9 C C5 TZ8 . . . D 2 20.212 -8.257 23.118 1 71.57 ? C5 TZ8 301 B 1 
HETATM 10 C C6 TZ8 . . . D 2 22.114 -7.14 24.187 1 70.13 ? C6 TZ8 301 B 1 
HETATM 11 N N3 TZ8 . . . D 2 23.632 -6.469 14.842 1 45.21 ? N3 TZ8 301 B 1 
HETATM 12 C C4 TZ8 . . . D 2 20.144 -10.368 21.312 1 55.7 ? C4 TZ8 301 B 1 
HETATM 13 O O4 TZ8 . . . D 2 20.588 -7.791 15.082 1 44.33 ? O4 TZ8 301 B 1 
HETATM 14 C C3 TZ8 . . . D 2 21.556 -10.462 20.725 1 60.16 ? C3 TZ8 301 B 1 
HETATM 15 O O3 TZ8 . . . D 2 25.719 -12.461 20.973 1 59.73 ? O3 TZ8 301 B 1 
HETATM 16 C C2 TZ8 . . . D 2 22.209 -8.949 18.9 1 54.4 ? C2 TZ8 301 B 1 
HETATM 17 N N TZ8 . . . D 2 21.549 -10.015 19.346 1 54.81 ? N TZ8 301 B 1 
HETATM 18 C C TZ8 . . . D 2 22.925 -8.059 16.635 1 47.79 ? C TZ8 301 B 1 
HETATM 19 O O TZ8 . . . D 2 23.095 -8.414 19.537 1 56.02 ? O TZ8 301 B 1 
HETATM 20 C C10 TZ8 . . . D 2 22.013 -8.907 28.099 1 77.8 ? C10 TZ8 301 B 1 
HETATM 21 C C11 TZ8 . . . D 2 23.473 -9.013 28.419 1 80.28 ? C11 TZ8 301 B 1 
HETATM 22 C C12 TZ8 . . . D 2 22.106 -11.888 20.834 1 59.5 ? C12 TZ8 301 B 1 
HETATM 23 C C13 TZ8 . . . D 2 23.734 -13.365 21.851 1 62.39 ? C13 TZ8 301 B 1 
HETATM 24 C C14 TZ8 . . . D 2 25.198 -13.521 21.522 1 64.38 ? C14 TZ8 301 B 1 
HETATM 25 C C15 TZ8 . . . D 2 22.624 -6.802 15.835 1 49.67 ? C15 TZ8 301 B 1 
HETATM 26 C C16 TZ8 . . . D 2 21.243 -6.835 15.221 1 47.63 ? C16 TZ8 301 B 1 
HETATM 27 O O2 TZ8 . . . D 2 25.824 -14.531 21.757 1 62.1 ? O2 TZ8 301 B 1 
HETATM 28 S S TZ8 . . . D 2 19.556 -8.667 21.536 1 60.54 ? S TZ8 301 B 1 
HETATM 29 S S1 TZ8 . . . D 2 19.639 -8.8 24.573 1 78.42 ? S1 TZ8 301 B 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           235 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           29 
#