data_7BIV # _model_server_result.job_id SjDo9947TB4Ki9WVVGMbsg _model_server_result.datetime_utc '2024-11-02 18:21:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7biv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7BIV # _exptl.entry_id 7BIV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7BIV _cell.length_a 71.646 _cell.length_b 71.646 _cell.length_c 100.483 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BIV _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 7BIV _atom_sites.fract_transf_matrix[1][1] 0.013958 _atom_sites.fract_transf_matrix[1][2] 0.008058 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS A 1 201 201 DMS DMS . C 2 DMS A 1 202 301 DMS DMS . D 3 EDO A 1 203 401 EDO EDO . E 4 SO4 A 1 204 1 SO4 SO4 . F 4 SO4 A 1 205 2 SO4 SO4 . G 5 TUW A 1 206 1 TUW L01 . H 6 HOH A 1 301 32 HOH HOH . H 6 HOH A 2 302 40 HOH HOH . H 6 HOH A 3 303 87 HOH HOH . H 6 HOH A 4 304 91 HOH HOH . H 6 HOH A 5 305 17 HOH HOH . H 6 HOH A 6 306 22 HOH HOH . H 6 HOH A 7 307 1 HOH HOH . H 6 HOH A 8 308 52 HOH HOH . H 6 HOH A 9 309 28 HOH HOH . H 6 HOH A 10 310 100 HOH HOH . H 6 HOH A 11 311 43 HOH HOH . H 6 HOH A 12 312 21 HOH HOH . H 6 HOH A 13 313 51 HOH HOH . H 6 HOH A 14 314 16 HOH HOH . H 6 HOH A 15 315 7 HOH HOH . H 6 HOH A 16 316 36 HOH HOH . H 6 HOH A 17 317 23 HOH HOH . H 6 HOH A 18 318 77 HOH HOH . H 6 HOH A 19 319 41 HOH HOH . H 6 HOH A 20 320 19 HOH HOH . H 6 HOH A 21 321 37 HOH HOH . H 6 HOH A 22 322 13 HOH HOH . H 6 HOH A 23 323 57 HOH HOH . H 6 HOH A 24 324 25 HOH HOH . H 6 HOH A 25 325 14 HOH HOH . H 6 HOH A 26 326 47 HOH HOH . H 6 HOH A 27 327 5 HOH HOH . H 6 HOH A 28 328 42 HOH HOH . H 6 HOH A 29 329 85 HOH HOH . H 6 HOH A 30 330 96 HOH HOH . H 6 HOH A 31 331 12 HOH HOH . H 6 HOH A 32 332 54 HOH HOH . H 6 HOH A 33 333 46 HOH HOH . H 6 HOH A 34 334 3 HOH HOH . H 6 HOH A 35 335 64 HOH HOH . H 6 HOH A 36 336 44 HOH HOH . H 6 HOH A 37 337 62 HOH HOH . H 6 HOH A 38 338 35 HOH HOH . H 6 HOH A 39 339 11 HOH HOH . H 6 HOH A 40 340 50 HOH HOH . H 6 HOH A 41 341 26 HOH HOH . H 6 HOH A 42 342 66 HOH HOH . H 6 HOH A 43 343 56 HOH HOH . H 6 HOH A 44 344 24 HOH HOH . H 6 HOH A 45 345 33 HOH HOH . H 6 HOH A 46 346 61 HOH HOH . H 6 HOH A 47 347 18 HOH HOH . H 6 HOH A 48 348 69 HOH HOH . H 6 HOH A 49 349 10 HOH HOH . H 6 HOH A 50 350 29 HOH HOH . H 6 HOH A 51 351 20 HOH HOH . H 6 HOH A 52 352 4 HOH HOH . H 6 HOH A 53 353 94 HOH HOH . H 6 HOH A 54 354 27 HOH HOH . H 6 HOH A 55 355 73 HOH HOH . H 6 HOH A 56 356 78 HOH HOH . H 6 HOH A 57 357 59 HOH HOH . H 6 HOH A 58 358 53 HOH HOH . H 6 HOH A 59 359 45 HOH HOH . H 6 HOH A 60 360 76 HOH HOH . H 6 HOH A 61 361 79 HOH HOH . H 6 HOH A 62 362 80 HOH HOH . H 6 HOH A 63 363 39 HOH HOH . H 6 HOH A 64 364 93 HOH HOH . H 6 HOH A 65 365 70 HOH HOH . H 6 HOH A 66 366 60 HOH HOH . H 6 HOH A 67 367 8 HOH HOH . H 6 HOH A 68 368 72 HOH HOH . H 6 HOH A 69 369 48 HOH HOH . H 6 HOH A 70 370 49 HOH HOH . H 6 HOH A 71 371 67 HOH HOH . H 6 HOH A 72 372 81 HOH HOH . H 6 HOH A 73 373 38 HOH HOH . H 6 HOH A 74 374 88 HOH HOH . H 6 HOH A 75 375 83 HOH HOH . H 6 HOH A 76 376 30 HOH HOH . H 6 HOH A 77 377 75 HOH HOH . H 6 HOH A 78 378 101 HOH HOH . H 6 HOH A 79 379 6 HOH HOH . H 6 HOH A 80 380 31 HOH HOH . H 6 HOH A 81 381 86 HOH HOH . H 6 HOH A 82 382 84 HOH HOH . H 6 HOH A 83 383 55 HOH HOH . H 6 HOH A 84 384 89 HOH HOH . H 6 HOH A 85 385 71 HOH HOH . H 6 HOH A 86 386 58 HOH HOH . H 6 HOH A 87 387 97 HOH HOH . H 6 HOH A 88 388 68 HOH HOH . H 6 HOH A 89 389 65 HOH HOH . H 6 HOH A 90 390 92 HOH HOH . H 6 HOH A 91 391 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . C 2 8.811 28.141 12.092 1 81.5 ? S DMS 202 A 1 HETATM 2 O O DMS . . . C 2 9.564 29.304 11.497 1 80.27 ? O DMS 202 A 1 HETATM 3 C C1 DMS . . . C 2 8.324 28.651 13.722 1 79.19 ? C1 DMS 202 A 1 HETATM 4 C C2 DMS . . . C 2 7.201 28.168 11.34 1 82.26 ? C2 DMS 202 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #