data_7BIV
#
_model_server_result.job_id            V8D0sb99iLPJM2wN6lFcdg 
_model_server_result.datetime_utc      '2024-11-02 18:22:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7biv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":206}' 
#
_entry.id    7BIV 
#
_exptl.entry_id    7BIV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              535.994 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-[[(1~{R})-1-(4-chlorophenyl)-7-fluoranyl-1-[[1-(hydroxymethyl)cyclopropyl]methoxy]-3-oxidanylidene-5-(2-oxidanylpropan-2-yl)isoindol-2-yl]methyl]pyridine-3-carbonitrile 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7BIV 
_cell.length_a            71.646 
_cell.length_b            71.646 
_cell.length_c            100.483 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BIV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C29 H27 Cl F N3 O4' 
_chem_comp.formula_weight    535.994 
_chem_comp.id                TUW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-[[(1~{R})-1-(4-chlorophenyl)-7-fluoranyl-1-[[1-(hydroxymethyl)cyclopropyl]methoxy]-3-oxidanylidene-5-(2-oxidanylpropan-2-yl)isoindol-2-yl]methyl]pyridine-3-carbonitrile 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL1 C33 TUW sing 328 n n 
C33 C35 TUW doub 329 n y 
C33 C32 TUW sing 330 n y 
C35 C36 TUW sing 331 n y 
C28 C26 TUW sing 332 n n 
C32 C31 TUW doub 333 n y 
C36 C30 TUW doub 334 n y 
N14 C13 TUW trip 335 n n 
F24 C23 TUW sing 336 n n 
C13 C12 TUW sing 337 n n 
C22 C23 TUW doub 338 n y 
C22 C21 TUW sing 339 n y 
C26 C21 TUW sing 340 n n 
C26 O29 TUW sing 341 n n 
C26 C27 TUW sing 342 n n 
C31 C30 TUW sing 343 n y 
C30 C6 TUW sing 344 n n 
C23 C25 TUW sing 345 n y 
C21 C20 TUW doub 346 n y 
C11 C12 TUW doub 347 n y 
C11 C10 TUW sing 348 n y 
C12 C15 TUW sing 349 n y 
C25 C6 TUW sing 350 n n 
C25 C19 TUW doub 351 n y 
C20 C19 TUW sing 352 n y 
C10 C9 TUW doub 353 n y 
C6 O5 TUW sing 354 n n 
C6 N7 TUW sing 355 n n 
C15 N16 TUW doub 356 n y 
C19 C17 TUW sing 357 n n 
O5 C4 TUW sing 358 n n 
C9 N16 TUW sing 359 n y 
C9 C8 TUW sing 360 n n 
N7 C17 TUW sing 361 n n 
N7 C8 TUW sing 362 n n 
C17 O18 TUW doub 363 n n 
C38 C3 TUW sing 364 n n 
C38 C37 TUW sing 365 n n 
C4 C3 TUW sing 366 n n 
C3 C1 TUW sing 367 n n 
C3 C37 TUW sing 368 n n 
C1 O2 TUW sing 369 n n 
C1 H39 TUW sing 370 n n 
C1 H40 TUW sing 371 n n 
C8 H44 TUW sing 372 n n 
C8 H45 TUW sing 373 n n 
C10 H46 TUW sing 374 n n 
C11 H47 TUW sing 375 n n 
C15 H48 TUW sing 376 n n 
C22 H50 TUW sing 377 n n 
C27 H51 TUW sing 378 n n 
C27 H53 TUW sing 379 n n 
C27 H52 TUW sing 380 n n 
C28 H54 TUW sing 381 n n 
C28 H56 TUW sing 382 n n 
C28 H55 TUW sing 383 n n 
C31 H58 TUW sing 384 n n 
C35 H60 TUW sing 385 n n 
C36 H61 TUW sing 386 n n 
C37 H62 TUW sing 387 n n 
C37 H63 TUW sing 388 n n 
C38 H65 TUW sing 389 n n 
C38 H64 TUW sing 390 n n 
O2 H43 TUW sing 391 n n 
C4 H41 TUW sing 392 n n 
C4 H42 TUW sing 393 n n 
C20 H49 TUW sing 394 n n 
O29 H57 TUW sing 395 n n 
C32 H59 TUW sing 396 n n 
#
_atom_sites.entry_id                     7BIV 
_atom_sites.fract_transf_matrix[1][1]    0.013958 
_atom_sites.fract_transf_matrix[1][2]    0.008058 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016117 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009952 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 201 201 DMS DMS . 
C 2 DMS A 1 202 301 DMS DMS . 
D 3 EDO A 1 203 401 EDO EDO . 
E 4 SO4 A 1 204 1 SO4 SO4 . 
F 4 SO4 A 1 205 2 SO4 SO4 . 
G 5 TUW A 1 206 1 TUW L01 . 
H 6 HOH A 1 301 32 HOH HOH . 
H 6 HOH A 2 302 40 HOH HOH . 
H 6 HOH A 3 303 87 HOH HOH . 
H 6 HOH A 4 304 91 HOH HOH . 
H 6 HOH A 5 305 17 HOH HOH . 
H 6 HOH A 6 306 22 HOH HOH . 
H 6 HOH A 7 307 1 HOH HOH . 
H 6 HOH A 8 308 52 HOH HOH . 
H 6 HOH A 9 309 28 HOH HOH . 
H 6 HOH A 10 310 100 HOH HOH . 
H 6 HOH A 11 311 43 HOH HOH . 
H 6 HOH A 12 312 21 HOH HOH . 
H 6 HOH A 13 313 51 HOH HOH . 
H 6 HOH A 14 314 16 HOH HOH . 
H 6 HOH A 15 315 7 HOH HOH . 
H 6 HOH A 16 316 36 HOH HOH . 
H 6 HOH A 17 317 23 HOH HOH . 
H 6 HOH A 18 318 77 HOH HOH . 
H 6 HOH A 19 319 41 HOH HOH . 
H 6 HOH A 20 320 19 HOH HOH . 
H 6 HOH A 21 321 37 HOH HOH . 
H 6 HOH A 22 322 13 HOH HOH . 
H 6 HOH A 23 323 57 HOH HOH . 
H 6 HOH A 24 324 25 HOH HOH . 
H 6 HOH A 25 325 14 HOH HOH . 
H 6 HOH A 26 326 47 HOH HOH . 
H 6 HOH A 27 327 5 HOH HOH . 
H 6 HOH A 28 328 42 HOH HOH . 
H 6 HOH A 29 329 85 HOH HOH . 
H 6 HOH A 30 330 96 HOH HOH . 
H 6 HOH A 31 331 12 HOH HOH . 
H 6 HOH A 32 332 54 HOH HOH . 
H 6 HOH A 33 333 46 HOH HOH . 
H 6 HOH A 34 334 3 HOH HOH . 
H 6 HOH A 35 335 64 HOH HOH . 
H 6 HOH A 36 336 44 HOH HOH . 
H 6 HOH A 37 337 62 HOH HOH . 
H 6 HOH A 38 338 35 HOH HOH . 
H 6 HOH A 39 339 11 HOH HOH . 
H 6 HOH A 40 340 50 HOH HOH . 
H 6 HOH A 41 341 26 HOH HOH . 
H 6 HOH A 42 342 66 HOH HOH . 
H 6 HOH A 43 343 56 HOH HOH . 
H 6 HOH A 44 344 24 HOH HOH . 
H 6 HOH A 45 345 33 HOH HOH . 
H 6 HOH A 46 346 61 HOH HOH . 
H 6 HOH A 47 347 18 HOH HOH . 
H 6 HOH A 48 348 69 HOH HOH . 
H 6 HOH A 49 349 10 HOH HOH . 
H 6 HOH A 50 350 29 HOH HOH . 
H 6 HOH A 51 351 20 HOH HOH . 
H 6 HOH A 52 352 4 HOH HOH . 
H 6 HOH A 53 353 94 HOH HOH . 
H 6 HOH A 54 354 27 HOH HOH . 
H 6 HOH A 55 355 73 HOH HOH . 
H 6 HOH A 56 356 78 HOH HOH . 
H 6 HOH A 57 357 59 HOH HOH . 
H 6 HOH A 58 358 53 HOH HOH . 
H 6 HOH A 59 359 45 HOH HOH . 
H 6 HOH A 60 360 76 HOH HOH . 
H 6 HOH A 61 361 79 HOH HOH . 
H 6 HOH A 62 362 80 HOH HOH . 
H 6 HOH A 63 363 39 HOH HOH . 
H 6 HOH A 64 364 93 HOH HOH . 
H 6 HOH A 65 365 70 HOH HOH . 
H 6 HOH A 66 366 60 HOH HOH . 
H 6 HOH A 67 367 8 HOH HOH . 
H 6 HOH A 68 368 72 HOH HOH . 
H 6 HOH A 69 369 48 HOH HOH . 
H 6 HOH A 70 370 49 HOH HOH . 
H 6 HOH A 71 371 67 HOH HOH . 
H 6 HOH A 72 372 81 HOH HOH . 
H 6 HOH A 73 373 38 HOH HOH . 
H 6 HOH A 74 374 88 HOH HOH . 
H 6 HOH A 75 375 83 HOH HOH . 
H 6 HOH A 76 376 30 HOH HOH . 
H 6 HOH A 77 377 75 HOH HOH . 
H 6 HOH A 78 378 101 HOH HOH . 
H 6 HOH A 79 379 6 HOH HOH . 
H 6 HOH A 80 380 31 HOH HOH . 
H 6 HOH A 81 381 86 HOH HOH . 
H 6 HOH A 82 382 84 HOH HOH . 
H 6 HOH A 83 383 55 HOH HOH . 
H 6 HOH A 84 384 89 HOH HOH . 
H 6 HOH A 85 385 71 HOH HOH . 
H 6 HOH A 86 386 58 HOH HOH . 
H 6 HOH A 87 387 97 HOH HOH . 
H 6 HOH A 88 388 68 HOH HOH . 
H 6 HOH A 89 389 65 HOH HOH . 
H 6 HOH A 90 390 92 HOH HOH . 
H 6 HOH A 91 391 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 TUW . . . G 5 18.441 10.653 16.311 0.94 35.12 ? C1 TUW 206 A 1 
HETATM 2 C C3 TUW . . . G 5 18.579 9.155 16.071 0.94 33.22 ? C3 TUW 206 A 1 
HETATM 3 C C6 TUW . . . G 5 21.41 8.872 13.74 0.94 24.28 ? C6 TUW 206 A 1 
HETATM 4 C C8 TUW . . . G 5 22.979 10.282 15.159 0.94 28.03 ? C8 TUW 206 A 1 
HETATM 5 C C10 TUW . . . G 5 24.814 10.723 13.479 0.94 27.11 ? C10 TUW 206 A 1 
HETATM 6 C C11 TUW . . . G 5 25.553 11.624 12.734 0.94 26.38 ? C11 TUW 206 A 1 
HETATM 7 C C12 TUW . . . G 5 25.343 12.979 12.884 0.94 26.44 ? C12 TUW 206 A 1 
HETATM 8 C C13 TUW . . . G 5 26.113 13.927 12.113 0.94 32.06 ? C13 TUW 206 A 1 
HETATM 9 C C15 TUW . . . G 5 24.341 13.383 13.767 0.94 29.96 ? C15 TUW 206 A 1 
HETATM 10 C C19 TUW . . . G 5 22.672 6.895 13.79 0.94 28.16 ? C19 TUW 206 A 1 
HETATM 11 C C21 TUW . . . G 5 22.256 4.827 12.64 0.94 25.77 ? C21 TUW 206 A 1 
HETATM 12 C C22 TUW . . . G 5 21.075 5.389 12.151 0.94 26.2 ? C22 TUW 206 A 1 
HETATM 13 C C23 TUW . . . G 5 20.68 6.657 12.474 0.94 26.69 ? C23 TUW 206 A 1 
HETATM 14 C C25 TUW . . . G 5 21.492 7.427 13.316 0.94 28.01 ? C25 TUW 206 A 1 
HETATM 15 C C26 TUW . . . G 5 22.706 3.428 12.221 0.94 29.9 ? C26 TUW 206 A 1 
HETATM 16 C C27 TUW . . . G 5 21.802 2.323 12.754 0.94 26.57 ? C27 TUW 206 A 1 
HETATM 17 C C28 TUW . . . G 5 22.842 3.311 10.702 0.94 27.67 ? C28 TUW 206 A 1 
HETATM 18 C C31 TUW . . . G 5 20.891 10.965 12.307 0.94 28.3 ? C31 TUW 206 A 1 
HETATM 19 C C35 TUW . . . G 5 22.404 10.003 10.195 0.94 27.48 ? C35 TUW 206 A 1 
HETATM 20 C C36 TUW . . . G 5 22.302 9.274 11.379 0.94 28.48 ? C36 TUW 206 A 1 
HETATM 21 C C37 TUW . . . G 5 17.853 8.244 17.009 0.94 36 ? C37 TUW 206 A 1 
HETATM 22 C C38 TUW . . . G 5 17.384 8.406 15.585 0.94 32.87 ? C38 TUW 206 A 1 
HETATM 23 O O2 TUW . . . G 5 19.534 11.177 17.035 0.94 41.09 ? O2 TUW 206 A 1 
HETATM 24 C C4 TUW . . . G 5 19.957 8.712 15.597 0.94 30.14 ? C4 TUW 206 A 1 
HETATM 25 O O5 TUW . . . G 5 20.233 9.341 14.301 0.94 28.28 ? O5 TUW 206 A 1 
HETATM 26 N N7 TUW . . . G 5 22.587 9.022 14.54 0.94 29.89 ? N7 TUW 206 A 1 
HETATM 27 C C9 TUW . . . G 5 23.829 11.206 14.324 0.94 30.54 ? C9 TUW 206 A 1 
HETATM 28 N N14 TUW . . . G 5 26.743 14.651 11.483 0.94 34.64 ? N14 TUW 206 A 1 
HETATM 29 N N16 TUW . . . G 5 23.593 12.52 14.48 0.94 31.14 ? N16 TUW 206 A 1 
HETATM 30 C C17 TUW . . . G 5 23.348 7.905 14.613 0.94 31.59 ? C17 TUW 206 A 1 
HETATM 31 O O18 TUW . . . G 5 24.384 7.797 15.25 0.94 33.08 ? O18 TUW 206 A 1 
HETATM 32 C C20 TUW . . . G 5 23.068 5.617 13.467 0.94 24 ? C20 TUW 206 A 1 
HETATM 33 F F24 TUW . . . G 5 19.515 7.129 12.003 0.94 29.26 ? F24 TUW 206 A 1 
HETATM 34 O O29 TUW . . . G 5 24.038 3.27 12.744 0.94 34.09 ? O29 TUW 206 A 1 
HETATM 35 C C30 TUW . . . G 5 21.554 9.741 12.458 0.94 26.55 ? C30 TUW 206 A 1 
HETATM 36 C C32 TUW . . . G 5 21.004 11.709 11.132 0.94 26.83 ? C32 TUW 206 A 1 
HETATM 37 C C33 TUW . . . G 5 21.776 11.212 10.097 0.94 26.29 ? C33 TUW 206 A 1 
HETATM 38 CL CL1 TUW . . . G 5 21.866 12.1 8.579 0.94 27.01 ? CL1 TUW 206 A 1 
HETATM 39 H H39 TUW . . . G 5 17.588 10.883 16.947 0.94 35.14 ? H39 TUW 206 A 1 
HETATM 40 H H40 TUW . . . G 5 18.278 11.175 15.37 0.94 35.17 ? H40 TUW 206 A 1 
HETATM 41 H H44 TUW . . . G 5 22.086 10.77 15.548 0.94 28.05 ? H44 TUW 206 A 1 
HETATM 42 H H45 TUW . . . G 5 23.561 10.067 16.055 0.94 28.06 ? H45 TUW 206 A 1 
HETATM 43 H H46 TUW . . . G 5 25.011 9.661 13.354 0.94 27.13 ? H46 TUW 206 A 1 
HETATM 44 H H47 TUW . . . G 5 26.329 11.252 12.067 0.94 26.36 ? H47 TUW 206 A 1 
HETATM 45 H H48 TUW . . . G 5 24.092 14.43 13.927 0.94 29.97 ? H48 TUW 206 A 1 
HETATM 46 H H50 TUW . . . G 5 20.417 4.795 11.518 0.94 26.18 ? H50 TUW 206 A 1 
HETATM 47 H H51 TUW . . . G 5 20.758 2.472 12.48 0.94 26.57 ? H51 TUW 206 A 1 
HETATM 48 H H53 TUW . . . G 5 21.845 2.266 13.84 0.94 26.57 ? H53 TUW 206 A 1 
HETATM 49 H H52 TUW . . . G 5 22.103 1.365 12.332 0.94 26.55 ? H52 TUW 206 A 1 
HETATM 50 H H54 TUW . . . G 5 23.478 4.081 10.267 0.94 27.66 ? H54 TUW 206 A 1 
HETATM 51 H H56 TUW . . . G 5 21.874 3.392 10.209 0.94 27.66 ? H56 TUW 206 A 1 
HETATM 52 H H55 TUW . . . G 5 23.269 2.354 10.406 0.94 27.67 ? H55 TUW 206 A 1 
HETATM 53 H H58 TUW . . . G 5 20.282 11.405 13.096 0.94 28.32 ? H58 TUW 206 A 1 
HETATM 54 H H60 TUW . . . G 5 23.001 9.618 9.371 0.94 27.48 ? H60 TUW 206 A 1 
HETATM 55 H H61 TUW . . . G 5 22.835 8.327 11.401 0.94 28.47 ? H61 TUW 206 A 1 
HETATM 56 H H62 TUW . . . G 5 18.299 7.305 17.33 0.94 36.01 ? H62 TUW 206 A 1 
HETATM 57 H H63 TUW . . . G 5 17.283 8.669 17.833 0.94 35.98 ? H63 TUW 206 A 1 
HETATM 58 H H65 TUW . . . G 5 17.486 7.59 14.871 0.94 32.89 ? H65 TUW 206 A 1 
HETATM 59 H H64 TUW . . . G 5 16.463 8.943 15.365 0.94 32.89 ? H64 TUW 206 A 1 
HETATM 60 H H43 TUW . . . G 5 20.083 11.715 16.406 0.94 41.09 ? H43 TUW 206 A 1 
HETATM 61 H H41 TUW . . . G 5 20.689 9.015 16.343 0.94 30.13 ? H41 TUW 206 A 1 
HETATM 62 H H42 TUW . . . G 5 19.997 7.624 15.575 0.94 30.1 ? H42 TUW 206 A 1 
HETATM 63 H H49 TUW . . . G 5 24.026 5.302 13.874 0.94 24.01 ? H49 TUW 206 A 1 
HETATM 64 H H57 TUW . . . G 5 24.667 3.793 12.182 0.94 34.07 ? H57 TUW 206 A 1 
HETATM 65 H H59 TUW . . . G 5 20.497 12.662 11.007 0.94 26.78 ? H59 TUW 206 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           65 
#