data_7BJQ
#
_model_server_result.job_id            MUXplTNbYSUga1tVD7aMTQ 
_model_server_result.datetime_utc      '2024-10-19 21:41:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bjq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":502}' 
#
_entry.id    7BJQ 
#
_exptl.entry_id    7BJQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         86.12 
_cell.angle_beta          69.26 
_cell.angle_gamma         69.53 
_cell.entry_id            7BJQ 
_cell.length_a            63.08 
_cell.length_b            69.501 
_cell.length_c            72.21 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BJQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,K 1 1 
B,C,D,I,J,L,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 45 A ASP 45 1_555 H MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? 
metalc ? metalc2 A OD2 ASP 47 A ASP 47 1_555 G MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc3 A OD2 ASP 94 A ASP 94 1_555 H MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
metalc ? metalc4 A NE2 HIS 115 A HIS 115 1_555 G MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc5 A OD2 ASP 171 A ASP 171 1_555 G MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? 
metalc ? metalc6 B OD2 ASP 45 B ASP 45 1_555 I MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? 
metalc ? metalc7 B OD2 ASP 47 B ASP 47 1_555 J MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? 
metalc ? metalc8 B OD2 ASP 94 B ASP 94 1_555 I MN MN . B MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc9 B OD1 ASP 94 B ASP 94 1_555 J MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc10 B NE2 HIS 115 B HIS 115 1_555 J MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc11 B OD2 ASP 171 B ASP 171 1_555 J MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
metalc ? metalc12 I MN MN . B MN 501 1_555 J MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? 
metalc ? metalc13 I MN MN . B MN 501 1_555 L O HOH . B HOH 612 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? 
hydrog WATSON-CRICK hydrog1 C N3 DC 1 D DC 1 1_555 E N1 DG 4 F DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 C N4 DC 1 D DC 1 1_555 E O6 DG 4 F DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 C O2 DC 1 D DC 1 1_555 E N2 DG 4 F DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 C N1 DA 2 D DA 2 1_555 E N3 DT 3 F DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 C N6 DA 2 D DA 2 1_555 E O4 DT 3 F DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 C N3 DT 3 D DT 3 1_555 E N1 DA 2 F DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 C O4 DT 3 D DT 3 1_555 E N6 DA 2 F DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 C N1 DG 4 D DG 4 1_555 E N3 DC 1 F DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 C N2 DG 4 D DG 4 1_555 E O2 DC 1 F DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 C O6 DG 4 D DG 4 1_555 E N4 DC 1 F DC 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 C N1 DG 5 D DG 5 1_555 D N3 DC 6 E DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 C N2 DG 5 D DG 5 1_555 D O2 DC 6 E DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 C O6 DG 5 D DG 5 1_555 D N4 DC 6 E DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 C N3 DC 6 D DC 6 1_555 D N1 DG 5 E DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 C N4 DC 6 D DC 6 1_555 D O6 DG 5 E DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 C O2 DC 6 D DC 6 1_555 D N2 DG 5 E DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 D N3 DC 1 E DC 1 1_555 D N1 DG 4 E DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 D N4 DC 1 E DC 1 1_555 D O6 DG 4 E DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog19 D O2 DC 1 E DC 1 1_555 D N2 DG 4 E DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'DG-DC PAIR' hydrog20 E O6 DG 4 F DG 4 1_555 F N4 DC 6 G DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog21 E N1 DG 5 F DG 5 1_555 F N3 DC 6 G DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog22 E N2 DG 5 F DG 5 1_555 F O2 DC 6 G DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog23 E O6 DG 5 F DG 5 1_555 F N4 DC 6 G DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog 'DC-DG PAIR' hydrog24 E O2 DC 6 F DC 6 1_555 F N2 DG 5 G DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7BJQ 
_atom_sites.fract_transf_matrix[1][1]    0.015853 
_atom_sites.fract_transf_matrix[1][2]    -0.005918 
_atom_sites.fract_transf_matrix[1][3]    -0.006396 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015358 
_atom_sites.fract_transf_matrix[2][3]    0.000987 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014839 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 MN A 1 501 1 MN MN . 
H 3 MN A 1 502 2 MN MN . 
I 3 MN B 1 501 3 MN MN . 
J 3 MN B 1 502 4 MN MN . 
K 4 HOH A 1 601 51 HOH HOH . 
K 4 HOH A 2 602 6 HOH HOH . 
K 4 HOH A 3 603 7 HOH HOH . 
K 4 HOH A 4 604 54 HOH HOH . 
K 4 HOH A 5 605 8 HOH HOH . 
K 4 HOH A 6 606 5 HOH HOH . 
K 4 HOH A 7 607 9 HOH HOH . 
K 4 HOH A 8 608 23 HOH HOH . 
K 4 HOH A 9 609 28 HOH HOH . 
K 4 HOH A 10 610 21 HOH HOH . 
K 4 HOH A 11 611 3 HOH HOH . 
K 4 HOH A 12 612 30 HOH HOH . 
K 4 HOH A 13 613 33 HOH HOH . 
K 4 HOH A 14 614 29 HOH HOH . 
K 4 HOH A 15 615 26 HOH HOH . 
K 4 HOH A 16 616 31 HOH HOH . 
K 4 HOH A 17 617 22 HOH HOH . 
K 4 HOH A 18 618 10 HOH HOH . 
K 4 HOH A 19 619 32 HOH HOH . 
K 4 HOH A 20 620 20 HOH HOH . 
K 4 HOH A 21 621 18 HOH HOH . 
K 4 HOH A 22 622 52 HOH HOH . 
K 4 HOH A 23 623 19 HOH HOH . 
K 4 HOH A 24 624 53 HOH HOH . 
L 4 HOH B 1 601 39 HOH HOH . 
L 4 HOH B 2 602 2 HOH HOH . 
L 4 HOH B 3 603 41 HOH HOH . 
L 4 HOH B 4 604 36 HOH HOH . 
L 4 HOH B 5 605 45 HOH HOH . 
L 4 HOH B 6 606 12 HOH HOH . 
L 4 HOH B 7 607 42 HOH HOH . 
L 4 HOH B 8 608 55 HOH HOH . 
L 4 HOH B 9 609 38 HOH HOH . 
L 4 HOH B 10 610 37 HOH HOH . 
L 4 HOH B 11 611 14 HOH HOH . 
L 4 HOH B 12 612 40 HOH HOH . 
L 4 HOH B 13 613 11 HOH HOH . 
L 4 HOH B 14 614 48 HOH HOH . 
M 4 HOH D 1 101 49 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               70.056 
_atom_site.Cartn_y               33.479 
_atom_site.Cartn_z               32.137 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        89.88 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           502 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#