data_7BJU # _model_server_result.job_id jEeGZ8F-7kNBUF7DEX1uHw _model_server_result.datetime_utc '2025-08-31 02:16:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bju # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 7BJU # _exptl.entry_id 7BJU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 709.933 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7BJU _cell.length_a 147.875 _cell.length_b 147.875 _cell.length_c 59.776 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BJU _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C39 H68 N O8 P' _chem_comp.formula_weight 709.933 _chem_comp.id EPH _chem_comp.mon_nstd_flag . _chem_comp.name L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 EPH sing 140 n n C1 O2 EPH sing 141 n n C1 H11 EPH sing 142 n n C1 H12A EPH sing 143 n n C2 C37 EPH sing 144 n n C2 O1 EPH sing 145 n n C2 H2 EPH sing 146 n n C4 O2 EPH sing 147 n n C4 O4 EPH doub 148 n n C4 C18 EPH sing 149 n n C18 C19 EPH sing 150 n n C18 H181 EPH sing 151 n n C18 H182 EPH sing 152 n n C19 C20 EPH sing 153 n n C19 H191 EPH sing 154 n n C19 H192 EPH sing 155 n n C20 C21 EPH sing 156 n n C20 H201 EPH sing 157 n n C20 H202 EPH sing 158 n n C21 C22 EPH sing 159 n n C21 H211 EPH sing 160 n n C21 H212 EPH sing 161 n n C22 C23 EPH sing 162 n n C22 H221 EPH sing 163 n n C22 H222 EPH sing 164 n n C23 C24 EPH sing 165 n n C23 H231 EPH sing 166 n n C23 H232 EPH sing 167 n n C24 C25 EPH doub 168 e n C24 H24 EPH sing 169 n n C25 C26 EPH sing 170 n n C25 H25 EPH sing 171 n n C26 C27 EPH sing 172 n n C26 H261 EPH sing 173 n n C26 H262 EPH sing 174 n n C27 C28 EPH sing 175 n n C27 H271 EPH sing 176 n n C27 H272 EPH sing 177 n n C28 C29 EPH doub 178 e n C28 H28 EPH sing 179 n n C29 C30 EPH sing 180 n n C29 H29 EPH sing 181 n n C30 C31 EPH sing 182 n n C30 H301 EPH sing 183 n n C30 H302 EPH sing 184 n n C31 C32 EPH sing 185 n n C31 H311 EPH sing 186 n n C31 H312 EPH sing 187 n n C32 C33 EPH doub 188 e n C32 H32 EPH sing 189 n n C33 C34 EPH sing 190 n n C33 H33 EPH sing 191 n n C34 H341 EPH sing 192 n n C34 H342 EPH sing 193 n n C34 H343 EPH sing 194 n n C37 O5 EPH sing 195 n n C37 H371 EPH sing 196 n n C37 H372 EPH sing 197 n n O5 P1 EPH sing 198 n n C3 O1 EPH sing 199 n n C3 O3 EPH doub 200 n n C3 C5 EPH sing 201 n n C5 C6 EPH sing 202 n n C5 H51 EPH sing 203 n n C5 H52 EPH sing 204 n n C6 C7 EPH sing 205 n n C6 H61 EPH sing 206 n n C6 H62 EPH sing 207 n n C7 C8 EPH sing 208 n n C7 H71 EPH sing 209 n n C7 H72 EPH sing 210 n n C8 C9 EPH sing 211 n n C8 H81 EPH sing 212 n n C8 H82 EPH sing 213 n n C9 C10 EPH sing 214 n n C9 H91 EPH sing 215 n n C9 H92 EPH sing 216 n n C10 C11 EPH sing 217 n n C10 H101 EPH sing 218 n n C10 H102 EPH sing 219 n n C11 C12 EPH sing 220 n n C11 H111 EPH sing 221 n n C11 H112 EPH sing 222 n n C12 C13 EPH doub 223 e n C12 H12 EPH sing 224 n n C13 C14 EPH sing 225 n n C13 H13 EPH sing 226 n n C14 C15 EPH sing 227 n n C14 H141 EPH sing 228 n n C14 H142 EPH sing 229 n n C15 C16 EPH doub 230 e n C15 H15 EPH sing 231 n n C16 C17 EPH sing 232 n n C16 H16 EPH sing 233 n n C17 C35 EPH sing 234 n n C17 H171 EPH sing 235 n n C17 H172 EPH sing 236 n n C35 C36 EPH sing 237 n n C35 H351 EPH sing 238 n n C35 H352 EPH sing 239 n n C36 H361 EPH sing 240 n n C36 H362 EPH sing 241 n n C36 H363 EPH sing 242 n n P1 O6 EPH sing 243 n n P1 O7 EPH doub 244 n n P1 O8 EPH sing 245 n n O6 HO6 EPH sing 246 n n O8 C38 EPH sing 247 n n C38 C39 EPH sing 248 n n C38 H381 EPH sing 249 n n C38 H382 EPH sing 250 n n C39 N1 EPH sing 251 n n C39 H391 EPH sing 252 n n C39 H392 EPH sing 253 n n N1 HN11 EPH sing 254 n n N1 HN12 EPH sing 255 n n # _atom_sites.entry_id 7BJU _atom_sites.fract_transf_matrix[1][1] 0.006762 _atom_sites.fract_transf_matrix[1][2] 0.003904 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007809 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016729 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EPH A 1 501 501 EPH EPH . D 4 PEG D 1 601 601 PEG PEG . E 5 834 D 1 602 601 834 834 . F 6 PE8 D 1 603 901 PE8 PE8 . G 7 PGE D 1 604 1001 PGE PGE . H 8 MG D 1 605 1 MG MG . I 9 HOH A 1 601 33 HOH HOH . I 9 HOH A 2 602 4 HOH HOH . I 9 HOH A 3 603 40 HOH HOH . I 9 HOH A 4 604 46 HOH HOH . I 9 HOH A 5 605 1 HOH HOH . I 9 HOH A 6 606 5 HOH HOH . I 9 HOH A 7 607 53 HOH HOH . I 9 HOH A 8 608 7 HOH HOH . I 9 HOH A 9 609 9 HOH HOH . I 9 HOH A 10 610 13 HOH HOH . I 9 HOH A 11 611 36 HOH HOH . I 9 HOH A 12 612 59 HOH HOH . I 9 HOH A 13 613 54 HOH HOH . I 9 HOH A 14 614 32 HOH HOH . I 9 HOH A 15 615 91 HOH HOH . I 9 HOH A 16 616 65 HOH HOH . I 9 HOH A 17 617 42 HOH HOH . I 9 HOH A 18 618 10 HOH HOH . I 9 HOH A 19 619 29 HOH HOH . I 9 HOH A 20 620 49 HOH HOH . I 9 HOH A 21 621 34 HOH HOH . I 9 HOH A 22 622 92 HOH HOH . I 9 HOH A 23 623 16 HOH HOH . I 9 HOH A 24 624 90 HOH HOH . I 9 HOH A 25 625 48 HOH HOH . I 9 HOH A 26 626 56 HOH HOH . I 9 HOH A 27 627 15 HOH HOH . I 9 HOH A 28 628 64 HOH HOH . I 9 HOH A 29 629 60 HOH HOH . I 9 HOH A 30 630 95 HOH HOH . I 9 HOH A 31 631 38 HOH HOH . I 9 HOH A 32 632 51 HOH HOH . I 9 HOH A 33 633 93 HOH HOH . I 9 HOH A 34 634 43 HOH HOH . I 9 HOH A 35 635 45 HOH HOH . I 9 HOH A 36 636 50 HOH HOH . I 9 HOH A 37 637 39 HOH HOH . I 9 HOH A 38 638 62 HOH HOH . I 9 HOH A 39 639 94 HOH HOH . I 9 HOH A 40 640 52 HOH HOH . I 9 HOH A 41 641 61 HOH HOH . I 9 HOH A 42 642 79 HOH HOH . J 9 HOH D 1 701 14 HOH HOH . J 9 HOH D 2 702 11 HOH HOH . J 9 HOH D 3 703 22 HOH HOH . J 9 HOH D 4 704 2 HOH HOH . J 9 HOH D 5 705 17 HOH HOH . J 9 HOH D 6 706 83 HOH HOH . J 9 HOH D 7 707 71 HOH HOH . J 9 HOH D 8 708 70 HOH HOH . J 9 HOH D 9 709 35 HOH HOH . J 9 HOH D 10 710 81 HOH HOH . J 9 HOH D 11 711 30 HOH HOH . J 9 HOH D 12 712 8 HOH HOH . J 9 HOH D 13 713 37 HOH HOH . J 9 HOH D 14 714 66 HOH HOH . J 9 HOH D 15 715 98 HOH HOH . J 9 HOH D 16 716 72 HOH HOH . J 9 HOH D 17 717 87 HOH HOH . J 9 HOH D 18 718 84 HOH HOH . J 9 HOH D 19 719 89 HOH HOH . J 9 HOH D 20 720 82 HOH HOH . J 9 HOH D 21 721 3 HOH HOH . J 9 HOH D 22 722 99 HOH HOH . J 9 HOH D 23 723 77 HOH HOH . J 9 HOH D 24 724 18 HOH HOH . J 9 HOH D 25 725 73 HOH HOH . J 9 HOH D 26 726 63 HOH HOH . J 9 HOH D 27 727 69 HOH HOH . J 9 HOH D 28 728 57 HOH HOH . J 9 HOH D 29 729 27 HOH HOH . J 9 HOH D 30 730 23 HOH HOH . J 9 HOH D 31 731 97 HOH HOH . J 9 HOH D 32 732 25 HOH HOH . J 9 HOH D 33 733 67 HOH HOH . J 9 HOH D 34 734 41 HOH HOH . J 9 HOH D 35 735 76 HOH HOH . J 9 HOH D 36 736 74 HOH HOH . J 9 HOH D 37 737 85 HOH HOH . J 9 HOH D 38 738 96 HOH HOH . J 9 HOH D 39 739 55 HOH HOH . J 9 HOH D 40 740 75 HOH HOH . J 9 HOH D 41 741 80 HOH HOH . J 9 HOH D 42 742 86 HOH HOH . J 9 HOH D 43 743 68 HOH HOH . J 9 HOH D 44 744 44 HOH HOH . J 9 HOH D 45 745 26 HOH HOH . J 9 HOH D 46 746 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EPH . . . C 3 -24.05 45.607 16.288 1 66.63 ? C1 EPH 501 A 1 HETATM 2 C C2 EPH . . . C 3 -24.024 46.569 15.11 1 70.68 ? C2 EPH 501 A 1 HETATM 3 C C4 EPH . . . C 3 -24.578 45.835 18.742 1 69.27 ? C4 EPH 501 A 1 HETATM 4 O O2 EPH . . . C 3 -24.431 46.394 17.412 1 59.64 ? O2 EPH 501 A 1 HETATM 5 O O4 EPH . . . C 3 -24.281 44.669 18.955 1 77.24 ? O4 EPH 501 A 1 HETATM 6 C C18 EPH . . . C 3 -25.102 46.726 19.839 1 60.37 ? C18 EPH 501 A 1 HETATM 7 C C19 EPH . . . C 3 -24.136 46.731 21.015 1 58.24 ? C19 EPH 501 A 1 HETATM 8 C C20 EPH . . . C 3 -22.753 47.252 20.656 1 63.78 ? C20 EPH 501 A 1 HETATM 9 C C21 EPH . . . C 3 -22.015 47.629 21.934 1 65.89 ? C21 EPH 501 A 1 HETATM 10 C C22 EPH . . . C 3 -20.582 48.048 21.646 1 69.27 ? C22 EPH 501 A 1 HETATM 11 C C23 EPH . . . C 3 -20.14 49.158 22.59 1 73.1 ? C23 EPH 501 A 1 HETATM 12 C C24 EPH . . . C 3 -20.896 50.425 22.271 1 82.25 ? C24 EPH 501 A 1 HETATM 13 C C25 EPH . . . C 3 -20.797 51.474 23.08 1 74.63 ? C25 EPH 501 A 1 HETATM 14 C C26 EPH . . . C 3 -21.541 52.75 22.766 1 56.64 ? C26 EPH 501 A 1 HETATM 15 C C27 EPH . . . C 3 -22.09 53.335 24.057 1 57.6 ? C27 EPH 501 A 1 HETATM 16 C C28 EPH . . . C 3 -21.291 54.553 24.443 1 64.5 ? C28 EPH 501 A 1 HETATM 17 C C29 EPH . . . C 3 -20.766 54.644 25.663 1 60.23 ? C29 EPH 501 A 1 HETATM 18 C C30 EPH . . . C 3 -20.93 53.52 26.659 1 50.7 ? C30 EPH 501 A 1 HETATM 19 C C31 EPH . . . C 3 -19.724 53.473 27.59 1 70.72 ? C31 EPH 501 A 1 HETATM 20 C C32 EPH . . . C 3 -18.453 53.653 26.794 1 86.41 ? C32 EPH 501 A 1 HETATM 21 C C33 EPH . . . C 3 -17.643 54.669 27.074 1 65.3 ? C33 EPH 501 A 1 HETATM 22 C C34 EPH . . . C 3 -16.371 54.862 26.286 1 60.42 ? C34 EPH 501 A 1 HETATM 23 C C37 EPH . . . C 3 -23.773 45.849 13.794 1 81.67 ? C37 EPH 501 A 1 HETATM 24 O O5 EPH . . . C 3 -24.232 46.695 12.741 1 95.74 ? O5 EPH 501 A 1 HETATM 25 C C3 EPH . . . C 3 -23.503 48.878 15.295 1 64.02 ? C3 EPH 501 A 1 HETATM 26 O O1 EPH . . . C 3 -22.987 47.523 15.321 1 64.51 ? O1 EPH 501 A 1 HETATM 27 O O3 EPH . . . C 3 -24.682 49.069 15.544 1 64.46 ? O3 EPH 501 A 1 HETATM 28 C C5 EPH . . . C 3 -22.581 50.023 14.954 1 68.67 ? C5 EPH 501 A 1 HETATM 29 C C6 EPH . . . C 3 -22.449 50.949 16.155 1 58.72 ? C6 EPH 501 A 1 HETATM 30 C C7 EPH . . . C 3 -22.219 50.148 17.428 1 63.61 ? C7 EPH 501 A 1 HETATM 31 C C8 EPH . . . C 3 -21.823 51.059 18.582 1 64.99 ? C8 EPH 501 A 1 HETATM 32 C C9 EPH . . . C 3 -20.417 51.611 18.386 1 73.4 ? C9 EPH 501 A 1 HETATM 33 C C10 EPH . . . C 3 -20.001 52.413 19.612 1 66.42 ? C10 EPH 501 A 1 HETATM 34 C C11 EPH . . . C 3 -18.53 52.807 19.584 1 64.04 ? C11 EPH 501 A 1 HETATM 35 C C12 EPH . . . C 3 -18.053 52.987 21.006 1 62.15 ? C12 EPH 501 A 1 HETATM 36 C C13 EPH . . . C 3 -16.802 52.691 21.349 1 64.05 ? C13 EPH 501 A 1 HETATM 37 C C14 EPH . . . C 3 -16.363 52.88 22.781 1 62.54 ? C14 EPH 501 A 1 HETATM 38 C C15 EPH . . . C 3 -16.12 51.511 23.364 1 67.87 ? C15 EPH 501 A 1 HETATM 39 C C16 EPH . . . C 3 -15.711 51.35 24.62 1 75.11 ? C16 EPH 501 A 1 HETATM 40 C C17 EPH . . . C 3 -15.488 49.961 25.177 1 64.49 ? C17 EPH 501 A 1 HETATM 41 C C35 EPH . . . C 3 -15.495 48.917 24.067 1 68.98 ? C35 EPH 501 A 1 HETATM 42 C C36 EPH . . . C 3 -16.857 48.264 23.924 1 82.21 ? C36 EPH 501 A 1 HETATM 43 P P1 EPH . . . C 3 -23.975 46.308 11.2 1 116.78 ? P1 EPH 501 A 1 HETATM 44 O O6 EPH . . . C 3 -25.312 46.334 10.497 1 109.38 ? O6 EPH 501 A 1 HETATM 45 O O7 EPH . . . C 3 -23.14 45.05 11.179 1 95.68 ? O7 EPH 501 A 1 HETATM 46 O O8 EPH . . . C 3 -23.08 47.526 10.645 1 80.88 ? O8 EPH 501 A 1 HETATM 47 C C38 EPH . . . C 3 -22.175 48.19 11.522 1 76.08 ? C38 EPH 501 A 1 HETATM 48 C C39 EPH . . . C 3 -20.749 47.972 11.035 1 91.1 ? C39 EPH 501 A 1 HETATM 49 N N1 EPH . . . C 3 -19.832 48.283 12.113 1 79.11 ? N1 EPH 501 A 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 49 #