data_7BJU # _model_server_result.job_id tg5Yh8YkacSmb-ghXgDw8w _model_server_result.datetime_utc '2025-08-31 04:34:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bju # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 7BJU # _exptl.entry_id 7BJU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7BJU _cell.length_a 147.875 _cell.length_b 147.875 _cell.length_c 59.776 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BJU _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 468 n n C1 C2 PEG sing 469 n n C1 H11 PEG sing 470 n n C1 H12 PEG sing 471 n n O1 HO1 PEG sing 472 n n C2 O2 PEG sing 473 n n C2 H21 PEG sing 474 n n C2 H22 PEG sing 475 n n O2 C3 PEG sing 476 n n C3 C4 PEG sing 477 n n C3 H31 PEG sing 478 n n C3 H32 PEG sing 479 n n C4 O4 PEG sing 480 n n C4 H41 PEG sing 481 n n C4 H42 PEG sing 482 n n O4 HO4 PEG sing 483 n n # _atom_sites.entry_id 7BJU _atom_sites.fract_transf_matrix[1][1] 0.006762 _atom_sites.fract_transf_matrix[1][2] 0.003904 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007809 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016729 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EPH A 1 501 501 EPH EPH . D 4 PEG D 1 601 601 PEG PEG . E 5 834 D 1 602 601 834 834 . F 6 PE8 D 1 603 901 PE8 PE8 . G 7 PGE D 1 604 1001 PGE PGE . H 8 MG D 1 605 1 MG MG . I 9 HOH A 1 601 33 HOH HOH . I 9 HOH A 2 602 4 HOH HOH . I 9 HOH A 3 603 40 HOH HOH . I 9 HOH A 4 604 46 HOH HOH . I 9 HOH A 5 605 1 HOH HOH . I 9 HOH A 6 606 5 HOH HOH . I 9 HOH A 7 607 53 HOH HOH . I 9 HOH A 8 608 7 HOH HOH . I 9 HOH A 9 609 9 HOH HOH . I 9 HOH A 10 610 13 HOH HOH . I 9 HOH A 11 611 36 HOH HOH . I 9 HOH A 12 612 59 HOH HOH . I 9 HOH A 13 613 54 HOH HOH . I 9 HOH A 14 614 32 HOH HOH . I 9 HOH A 15 615 91 HOH HOH . I 9 HOH A 16 616 65 HOH HOH . I 9 HOH A 17 617 42 HOH HOH . I 9 HOH A 18 618 10 HOH HOH . I 9 HOH A 19 619 29 HOH HOH . I 9 HOH A 20 620 49 HOH HOH . I 9 HOH A 21 621 34 HOH HOH . I 9 HOH A 22 622 92 HOH HOH . I 9 HOH A 23 623 16 HOH HOH . I 9 HOH A 24 624 90 HOH HOH . I 9 HOH A 25 625 48 HOH HOH . I 9 HOH A 26 626 56 HOH HOH . I 9 HOH A 27 627 15 HOH HOH . I 9 HOH A 28 628 64 HOH HOH . I 9 HOH A 29 629 60 HOH HOH . I 9 HOH A 30 630 95 HOH HOH . I 9 HOH A 31 631 38 HOH HOH . I 9 HOH A 32 632 51 HOH HOH . I 9 HOH A 33 633 93 HOH HOH . I 9 HOH A 34 634 43 HOH HOH . I 9 HOH A 35 635 45 HOH HOH . I 9 HOH A 36 636 50 HOH HOH . I 9 HOH A 37 637 39 HOH HOH . I 9 HOH A 38 638 62 HOH HOH . I 9 HOH A 39 639 94 HOH HOH . I 9 HOH A 40 640 52 HOH HOH . I 9 HOH A 41 641 61 HOH HOH . I 9 HOH A 42 642 79 HOH HOH . J 9 HOH D 1 701 14 HOH HOH . J 9 HOH D 2 702 11 HOH HOH . J 9 HOH D 3 703 22 HOH HOH . J 9 HOH D 4 704 2 HOH HOH . J 9 HOH D 5 705 17 HOH HOH . J 9 HOH D 6 706 83 HOH HOH . J 9 HOH D 7 707 71 HOH HOH . J 9 HOH D 8 708 70 HOH HOH . J 9 HOH D 9 709 35 HOH HOH . J 9 HOH D 10 710 81 HOH HOH . J 9 HOH D 11 711 30 HOH HOH . J 9 HOH D 12 712 8 HOH HOH . J 9 HOH D 13 713 37 HOH HOH . J 9 HOH D 14 714 66 HOH HOH . J 9 HOH D 15 715 98 HOH HOH . J 9 HOH D 16 716 72 HOH HOH . J 9 HOH D 17 717 87 HOH HOH . J 9 HOH D 18 718 84 HOH HOH . J 9 HOH D 19 719 89 HOH HOH . J 9 HOH D 20 720 82 HOH HOH . J 9 HOH D 21 721 3 HOH HOH . J 9 HOH D 22 722 99 HOH HOH . J 9 HOH D 23 723 77 HOH HOH . J 9 HOH D 24 724 18 HOH HOH . J 9 HOH D 25 725 73 HOH HOH . J 9 HOH D 26 726 63 HOH HOH . J 9 HOH D 27 727 69 HOH HOH . J 9 HOH D 28 728 57 HOH HOH . J 9 HOH D 29 729 27 HOH HOH . J 9 HOH D 30 730 23 HOH HOH . J 9 HOH D 31 731 97 HOH HOH . J 9 HOH D 32 732 25 HOH HOH . J 9 HOH D 33 733 67 HOH HOH . J 9 HOH D 34 734 41 HOH HOH . J 9 HOH D 35 735 76 HOH HOH . J 9 HOH D 36 736 74 HOH HOH . J 9 HOH D 37 737 85 HOH HOH . J 9 HOH D 38 738 96 HOH HOH . J 9 HOH D 39 739 55 HOH HOH . J 9 HOH D 40 740 75 HOH HOH . J 9 HOH D 41 741 80 HOH HOH . J 9 HOH D 42 742 86 HOH HOH . J 9 HOH D 43 743 68 HOH HOH . J 9 HOH D 44 744 44 HOH HOH . J 9 HOH D 45 745 26 HOH HOH . J 9 HOH D 46 746 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 4 -0.074 44.269 28.71 1 58.87 ? C1 PEG 601 D 1 HETATM 2 O O1 PEG . . . D 4 -0.291 43.982 30.095 1 63.03 ? O1 PEG 601 D 1 HETATM 3 C C2 PEG . . . D 4 -0.6 43.12 27.86 1 71.04 ? C2 PEG 601 D 1 HETATM 4 O O2 PEG . . . D 4 -0.399 43.432 26.484 1 80.79 ? O2 PEG 601 D 1 HETATM 5 C C3 PEG . . . D 4 -1.377 42.813 25.653 1 78.71 ? C3 PEG 601 D 1 HETATM 6 C C4 PEG . . . D 4 -1.267 43.385 24.245 1 88.95 ? C4 PEG 601 D 1 HETATM 7 O O4 PEG . . . D 4 -2.58 43.637 23.733 1 73.87 ? O4 PEG 601 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #