data_7BJY # _model_server_result.job_id '_WcXul5sdPSEeUCNr1g0SA' _model_server_result.datetime_utc '2024-11-23 06:11:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bjy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":203}' # _entry.id 7BJY # _exptl.entry_id 7BJY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7BJY _cell.length_a 57.04 _cell.length_b 57.04 _cell.length_c 407.87 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BJY _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,G 1 1 B,D,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 161 n n C1 C2 EDO sing 162 n n C1 H11 EDO sing 163 n n C1 H12 EDO sing 164 n n O1 HO1 EDO sing 165 n n C2 O2 EDO sing 166 n n C2 H21 EDO sing 167 n n C2 H22 EDO sing 168 n n O2 HO2 EDO sing 169 n n # _atom_sites.entry_id 7BJY _atom_sites.fract_transf_matrix[1][1] 0.017532 _atom_sites.fract_transf_matrix[1][2] 0.010122 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020244 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 79C A 1 201 1 79C 79C . D 2 79C B 1 201 2 79C 79C . E 3 EDO B 1 202 1 EDO EDO . F 3 EDO B 1 203 2 EDO EDO . G 4 HOH A 1 301 30 HOH HOH . G 4 HOH A 2 302 32 HOH HOH . G 4 HOH A 3 303 12 HOH HOH . G 4 HOH A 4 304 7 HOH HOH . G 4 HOH A 5 305 8 HOH HOH . G 4 HOH A 6 306 2 HOH HOH . G 4 HOH A 7 307 22 HOH HOH . G 4 HOH A 8 308 24 HOH HOH . G 4 HOH A 9 309 31 HOH HOH . G 4 HOH A 10 310 14 HOH HOH . G 4 HOH A 11 311 10 HOH HOH . G 4 HOH A 12 312 4 HOH HOH . G 4 HOH A 13 313 34 HOH HOH . G 4 HOH A 14 314 29 HOH HOH . G 4 HOH A 15 315 33 HOH HOH . G 4 HOH A 16 316 11 HOH HOH . G 4 HOH A 17 317 19 HOH HOH . G 4 HOH A 18 318 15 HOH HOH . H 4 HOH B 1 301 13 HOH HOH . H 4 HOH B 2 302 6 HOH HOH . H 4 HOH B 3 303 23 HOH HOH . H 4 HOH B 4 304 9 HOH HOH . H 4 HOH B 5 305 1 HOH HOH . H 4 HOH B 6 306 17 HOH HOH . H 4 HOH B 7 307 20 HOH HOH . H 4 HOH B 8 308 37 HOH HOH . H 4 HOH B 9 309 25 HOH HOH . H 4 HOH B 10 310 36 HOH HOH . H 4 HOH B 11 311 18 HOH HOH . H 4 HOH B 12 312 28 HOH HOH . H 4 HOH B 13 313 3 HOH HOH . H 4 HOH B 14 314 38 HOH HOH . H 4 HOH B 15 315 35 HOH HOH . H 4 HOH B 16 316 5 HOH HOH . H 4 HOH B 17 317 26 HOH HOH . H 4 HOH B 18 318 21 HOH HOH . H 4 HOH B 19 319 40 HOH HOH . H 4 HOH B 20 320 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 3 23.092 27.951 9.464 1 68.18 ? C1 EDO 203 B 1 HETATM 2 O O1 EDO . . . F 3 23.466 27.606 8.124 1 72.39 ? O1 EDO 203 B 1 HETATM 3 C C2 EDO . . . F 3 24.13 27.467 10.47 1 73.83 ? C2 EDO 203 B 1 HETATM 4 O O2 EDO . . . F 3 23.502 26.682 11.498 1 75.81 ? O2 EDO 203 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 382 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #