data_7BK2 # _model_server_result.job_id ZL_rfyml-BSMnTA_qm5R2A _model_server_result.datetime_utc '2024-11-30 08:58:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bk2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7BK2 # _exptl.entry_id 7BK2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 421.499 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-amino-7-methyl-2-({5-methyl-1-[(3R)-oxolan-3-yl]-1H-pyrazol-4-yl}amino)-6-[(2R)-2-methylpyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.62 _cell.angle_gamma 90 _cell.entry_id 7BK2 _cell.length_a 44.91 _cell.length_b 65.96 _cell.length_c 55.04 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BK2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H27 N9 O' _chem_comp.formula_weight 421.499 _chem_comp.id U0K _chem_comp.mon_nstd_flag . _chem_comp.name 4-amino-7-methyl-2-({5-methyl-1-[(3R)-oxolan-3-yl]-1H-pyrazol-4-yl}amino)-6-[(2R)-2-methylpyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 4-azanyl-7-methyl-2-[[5-methyl-1-[(3~{R})-oxolan-3-yl]pyrazol-4-yl]amino]-6-[(2~{R})-2-methylpyrrolidin-1-yl]pyrrolo[2,3-d]pyrimidine-5-carbonitrile # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C4 U0K sing 358 n n C3 C2 U0K sing 359 n n C1 C2 U0K sing 360 n n C4 C5 U0K sing 361 n n C2 N1 U0K sing 362 n n C5 N1 U0K sing 363 n n N1 C6 U0K sing 364 n n C21 N9 U0K sing 365 n n C6 N9 U0K sing 366 n y C6 C7 U0K doub 367 n y N2 C8 U0K trip 368 n n N9 C20 U0K sing 369 n y C8 C7 U0K sing 370 n n C7 C9 U0K sing 371 n y C20 C9 U0K doub 372 n y C20 N8 U0K sing 373 n y C9 C10 U0K sing 374 n y N8 C11 U0K doub 375 n y C10 N3 U0K sing 376 n n C10 N4 U0K doub 377 n y C15 N7 U0K doub 378 n y C15 C12 U0K sing 379 n y C11 N4 U0K sing 380 n y C11 N5 U0K sing 381 n n N7 N6 U0K sing 382 n y O1 C18 U0K sing 383 n n O1 C19 U0K sing 384 n n N5 C12 U0K sing 385 n n C12 C13 U0K doub 386 n y C18 C17 U0K sing 387 n n N6 C13 U0K sing 388 n y N6 C16 U0K sing 389 n n C19 C16 U0K sing 390 n n C13 C14 U0K sing 391 n n C16 C17 U0K sing 392 n n C1 H1 U0K sing 393 n n C1 H2 U0K sing 394 n n C1 H3 U0K sing 395 n n C2 H4 U0K sing 396 n n C3 H5 U0K sing 397 n n C3 H6 U0K sing 398 n n N3 H7 U0K sing 399 n n N3 H8 U0K sing 400 n n C4 H9 U0K sing 401 n n C4 H10 U0K sing 402 n n C5 H11 U0K sing 403 n n C5 H12 U0K sing 404 n n N5 H13 U0K sing 405 n n C14 H14 U0K sing 406 n n C14 H15 U0K sing 407 n n C14 H16 U0K sing 408 n n C15 H17 U0K sing 409 n n C16 H18 U0K sing 410 n n C17 H19 U0K sing 411 n n C17 H20 U0K sing 412 n n C18 H21 U0K sing 413 n n C18 H22 U0K sing 414 n n C19 H23 U0K sing 415 n n C19 H24 U0K sing 416 n n C21 H25 U0K sing 417 n n C21 H26 U0K sing 418 n n C21 H27 U0K sing 419 n n # _atom_sites.entry_id 7BK2 _atom_sites.fract_transf_matrix[1][1] 0.022267 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003774 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015161 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018428 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 U0K A 1 301 1272 U0K UNL . C 3 CL A 1 302 1273 CL CL . D 3 CL A 1 303 1274 CL CL . E 4 HOH A 1 401 2171 HOH HOH . E 4 HOH A 2 402 2085 HOH HOH . E 4 HOH A 3 403 2173 HOH HOH . E 4 HOH A 4 404 2170 HOH HOH . E 4 HOH A 5 405 2123 HOH HOH . E 4 HOH A 6 406 2091 HOH HOH . E 4 HOH A 7 407 2099 HOH HOH . E 4 HOH A 8 408 2048 HOH HOH . E 4 HOH A 9 409 2043 HOH HOH . E 4 HOH A 10 410 2153 HOH HOH . E 4 HOH A 11 411 2070 HOH HOH . E 4 HOH A 12 412 2026 HOH HOH . E 4 HOH A 13 413 2114 HOH HOH . E 4 HOH A 14 414 2104 HOH HOH . E 4 HOH A 15 415 2087 HOH HOH . E 4 HOH A 16 416 2013 HOH HOH . E 4 HOH A 17 417 2086 HOH HOH . E 4 HOH A 18 418 2037 HOH HOH . E 4 HOH A 19 419 2129 HOH HOH . E 4 HOH A 20 420 2029 HOH HOH . E 4 HOH A 21 421 2105 HOH HOH . E 4 HOH A 22 422 2163 HOH HOH . E 4 HOH A 23 423 2122 HOH HOH . E 4 HOH A 24 424 2075 HOH HOH . E 4 HOH A 25 425 2036 HOH HOH . E 4 HOH A 26 426 2172 HOH HOH . E 4 HOH A 27 427 2113 HOH HOH . E 4 HOH A 28 428 2004 HOH HOH . E 4 HOH A 29 429 2109 HOH HOH . E 4 HOH A 30 430 2203 HOH HOH . E 4 HOH A 31 431 2191 HOH HOH . E 4 HOH A 32 432 2010 HOH HOH . E 4 HOH A 33 433 2020 HOH HOH . E 4 HOH A 34 434 2047 HOH HOH . E 4 HOH A 35 435 2038 HOH HOH . E 4 HOH A 36 436 2202 HOH HOH . E 4 HOH A 37 437 2017 HOH HOH . E 4 HOH A 38 438 2022 HOH HOH . E 4 HOH A 39 439 2143 HOH HOH . E 4 HOH A 40 440 2187 HOH HOH . E 4 HOH A 41 441 2069 HOH HOH . E 4 HOH A 42 442 2012 HOH HOH . E 4 HOH A 43 443 2116 HOH HOH . E 4 HOH A 44 444 2057 HOH HOH . E 4 HOH A 45 445 2061 HOH HOH . E 4 HOH A 46 446 2031 HOH HOH . E 4 HOH A 47 447 2089 HOH HOH . E 4 HOH A 48 448 2183 HOH HOH . E 4 HOH A 49 449 2018 HOH HOH . E 4 HOH A 50 450 2098 HOH HOH . E 4 HOH A 51 451 2011 HOH HOH . E 4 HOH A 52 452 2002 HOH HOH . E 4 HOH A 53 453 2107 HOH HOH . E 4 HOH A 54 454 2039 HOH HOH . E 4 HOH A 55 455 2024 HOH HOH . E 4 HOH A 56 456 2106 HOH HOH . E 4 HOH A 57 457 2157 HOH HOH . E 4 HOH A 58 458 2121 HOH HOH . E 4 HOH A 59 459 2131 HOH HOH . E 4 HOH A 60 460 2102 HOH HOH . E 4 HOH A 61 461 2025 HOH HOH . E 4 HOH A 62 462 2074 HOH HOH . E 4 HOH A 63 463 2045 HOH HOH . E 4 HOH A 64 464 2067 HOH HOH . E 4 HOH A 65 465 2016 HOH HOH . E 4 HOH A 66 466 2193 HOH HOH . E 4 HOH A 67 467 2136 HOH HOH . E 4 HOH A 68 468 2001 HOH HOH . E 4 HOH A 69 469 2044 HOH HOH . E 4 HOH A 70 470 2054 HOH HOH . E 4 HOH A 71 471 2049 HOH HOH . E 4 HOH A 72 472 2198 HOH HOH . E 4 HOH A 73 473 2182 HOH HOH . E 4 HOH A 74 474 2028 HOH HOH . E 4 HOH A 75 475 2005 HOH HOH . E 4 HOH A 76 476 2158 HOH HOH . E 4 HOH A 77 477 2167 HOH HOH . E 4 HOH A 78 478 2079 HOH HOH . E 4 HOH A 79 479 2003 HOH HOH . E 4 HOH A 80 480 2084 HOH HOH . E 4 HOH A 81 481 2014 HOH HOH . E 4 HOH A 82 482 2015 HOH HOH . E 4 HOH A 83 483 2095 HOH HOH . E 4 HOH A 84 484 2060 HOH HOH . E 4 HOH A 85 485 2041 HOH HOH . E 4 HOH A 86 486 2065 HOH HOH . E 4 HOH A 87 487 2111 HOH HOH . E 4 HOH A 88 488 2151 HOH HOH . E 4 HOH A 89 489 2035 HOH HOH . E 4 HOH A 90 490 2112 HOH HOH . E 4 HOH A 91 491 2165 HOH HOH . E 4 HOH A 92 492 2142 HOH HOH . E 4 HOH A 93 493 2150 HOH HOH . E 4 HOH A 94 494 2059 HOH HOH . E 4 HOH A 95 495 2149 HOH HOH . E 4 HOH A 96 496 2066 HOH HOH . E 4 HOH A 97 497 2064 HOH HOH . E 4 HOH A 98 498 2034 HOH HOH . E 4 HOH A 99 499 2159 HOH HOH . E 4 HOH A 100 500 2130 HOH HOH . E 4 HOH A 101 501 2071 HOH HOH . E 4 HOH A 102 502 2120 HOH HOH . E 4 HOH A 103 503 2126 HOH HOH . E 4 HOH A 104 504 2156 HOH HOH . E 4 HOH A 105 505 2078 HOH HOH . E 4 HOH A 106 506 2141 HOH HOH . E 4 HOH A 107 507 2062 HOH HOH . E 4 HOH A 108 508 2117 HOH HOH . E 4 HOH A 109 509 2093 HOH HOH . E 4 HOH A 110 510 2072 HOH HOH . E 4 HOH A 111 511 2021 HOH HOH . E 4 HOH A 112 512 2068 HOH HOH . E 4 HOH A 113 513 2008 HOH HOH . E 4 HOH A 114 514 2040 HOH HOH . E 4 HOH A 115 515 2184 HOH HOH . E 4 HOH A 116 516 2139 HOH HOH . E 4 HOH A 117 517 2174 HOH HOH . E 4 HOH A 118 518 2073 HOH HOH . E 4 HOH A 119 519 2053 HOH HOH . E 4 HOH A 120 520 2050 HOH HOH . E 4 HOH A 121 521 2033 HOH HOH . E 4 HOH A 122 522 2007 HOH HOH . E 4 HOH A 123 523 2027 HOH HOH . E 4 HOH A 124 524 2178 HOH HOH . E 4 HOH A 125 525 2056 HOH HOH . E 4 HOH A 126 526 2110 HOH HOH . E 4 HOH A 127 527 2100 HOH HOH . E 4 HOH A 128 528 2088 HOH HOH . E 4 HOH A 129 529 2119 HOH HOH . E 4 HOH A 130 530 2051 HOH HOH . E 4 HOH A 131 531 2094 HOH HOH . E 4 HOH A 132 532 2055 HOH HOH . E 4 HOH A 133 533 2082 HOH HOH . E 4 HOH A 134 534 2058 HOH HOH . E 4 HOH A 135 535 2164 HOH HOH . E 4 HOH A 136 536 2137 HOH HOH . E 4 HOH A 137 537 2092 HOH HOH . E 4 HOH A 138 538 2138 HOH HOH . E 4 HOH A 139 539 2128 HOH HOH . E 4 HOH A 140 540 2189 HOH HOH . E 4 HOH A 141 541 2127 HOH HOH . E 4 HOH A 142 542 2042 HOH HOH . E 4 HOH A 143 543 2080 HOH HOH . E 4 HOH A 144 544 2101 HOH HOH . E 4 HOH A 145 545 2185 HOH HOH . E 4 HOH A 146 546 2186 HOH HOH . E 4 HOH A 147 547 2196 HOH HOH . E 4 HOH A 148 548 2144 HOH HOH . E 4 HOH A 149 549 2176 HOH HOH . E 4 HOH A 150 550 2125 HOH HOH . E 4 HOH A 151 551 2180 HOH HOH . E 4 HOH A 152 552 2177 HOH HOH . E 4 HOH A 153 553 2140 HOH HOH . E 4 HOH A 154 554 2132 HOH HOH . E 4 HOH A 155 555 2190 HOH HOH . E 4 HOH A 156 556 2195 HOH HOH . E 4 HOH A 157 557 2192 HOH HOH . E 4 HOH A 158 558 2019 HOH HOH . E 4 HOH A 159 559 2030 HOH HOH . E 4 HOH A 160 560 2162 HOH HOH . E 4 HOH A 161 561 2199 HOH HOH . E 4 HOH A 162 562 2194 HOH HOH . E 4 HOH A 163 563 2175 HOH HOH . E 4 HOH A 164 564 2197 HOH HOH . E 4 HOH A 165 565 2006 HOH HOH . E 4 HOH A 166 566 2160 HOH HOH . E 4 HOH A 167 567 2181 HOH HOH . E 4 HOH A 168 568 2145 HOH HOH . E 4 HOH A 169 569 2147 HOH HOH . E 4 HOH A 170 570 2200 HOH HOH . E 4 HOH A 171 571 2133 HOH HOH . E 4 HOH A 172 572 2118 HOH HOH . E 4 HOH A 173 573 2188 HOH HOH . E 4 HOH A 174 574 2154 HOH HOH . E 4 HOH A 175 575 2179 HOH HOH . E 4 HOH A 176 576 2076 HOH HOH . E 4 HOH A 177 577 2152 HOH HOH . E 4 HOH A 178 578 2063 HOH HOH . E 4 HOH A 179 579 2134 HOH HOH . E 4 HOH A 180 580 2155 HOH HOH . E 4 HOH A 181 581 2201 HOH HOH . E 4 HOH A 182 582 2090 HOH HOH . E 4 HOH A 183 583 2146 HOH HOH . E 4 HOH A 184 584 2204 HOH HOH . E 4 HOH A 185 585 2108 HOH HOH . E 4 HOH A 186 586 2023 HOH HOH . E 4 HOH A 187 587 2046 HOH HOH . E 4 HOH A 188 588 2161 HOH HOH . E 4 HOH A 189 589 2032 HOH HOH . E 4 HOH A 190 590 2124 HOH HOH . E 4 HOH A 191 591 2103 HOH HOH . E 4 HOH A 192 592 2148 HOH HOH . E 4 HOH A 193 593 2115 HOH HOH . E 4 HOH A 194 594 2077 HOH HOH . E 4 HOH A 195 595 2083 HOH HOH . E 4 HOH A 196 596 2168 HOH HOH . E 4 HOH A 197 597 2135 HOH HOH . E 4 HOH A 198 598 2096 HOH HOH . E 4 HOH A 199 599 2052 HOH HOH . E 4 HOH A 200 600 2097 HOH HOH . E 4 HOH A 201 601 2009 HOH HOH . E 4 HOH A 202 602 2081 HOH HOH . E 4 HOH A 203 603 2169 HOH HOH . E 4 HOH A 204 604 2166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 U0K . . . B 2 5.434 -5.699 13.447 1 35.66 ? C1 U0K 301 A 1 HETATM 2 N N1 U0K . . . B 2 4.81 -7.471 15.03 1 38.15 ? N1 U0K 301 A 1 HETATM 3 O O1 U0K . . . B 2 -4.835 -6.231 19.852 1 62.81 ? O1 U0K 301 A 1 HETATM 4 C C2 U0K . . . B 2 5.818 -7.037 14.062 1 37.64 ? C2 U0K 301 A 1 HETATM 5 N N2 U0K . . . B 2 7.738 -4.962 16.499 1 29.92 ? N2 U0K 301 A 1 HETATM 6 C C3 U0K . . . B 2 5.821 -8.225 13.092 1 43.55 ? C3 U0K 301 A 1 HETATM 7 N N3 U0K . . . B 2 5.608 -3.386 19 1 28.05 ? N3 U0K 301 A 1 HETATM 8 C C4 U0K . . . B 2 5.394 -9.419 13.951 1 42.2 ? C4 U0K 301 A 1 HETATM 9 N N4 U0K . . . B 2 3.358 -3.748 19.434 1 29.35 ? N4 U0K 301 A 1 HETATM 10 C C5 U0K . . . B 2 4.32 -8.837 14.833 1 37.15 ? C5 U0K 301 A 1 HETATM 11 N N5 U0K . . . B 2 1.132 -4.086 19.94 1 35.2 ? N5 U0K 301 A 1 HETATM 12 C C6 U0K . . . B 2 4.481 -6.618 16.101 1 32.53 ? C6 U0K 301 A 1 HETATM 13 N N6 U0K . . . B 2 -2.125 -5.235 20.679 1 44.61 ? N6 U0K 301 A 1 HETATM 14 C C7 U0K . . . B 2 5.253 -5.675 16.796 1 28.94 ? C7 U0K 301 A 1 HETATM 15 N N7 U0K . . . B 2 -1.976 -5.828 19.457 1 39.89 ? N7 U0K 301 A 1 HETATM 16 C C8 U0K . . . B 2 6.622 -5.327 16.613 1 27.71 ? C8 U0K 301 A 1 HETATM 17 N N8 U0K . . . B 2 2.014 -5.388 18.308 1 31.75 ? N8 U0K 301 A 1 HETATM 18 C C9 U0K . . . B 2 4.388 -5.1 17.789 1 28.93 ? C9 U0K 301 A 1 HETATM 19 N N9 U0K . . . B 2 3.198 -6.603 16.572 1 30.67 ? N9 U0K 301 A 1 HETATM 20 C C10 U0K . . . B 2 4.484 -4.091 18.772 1 31.21 ? C10 U0K 301 A 1 HETATM 21 C C11 U0K . . . B 2 2.214 -4.43 19.204 1 32.98 ? C11 U0K 301 A 1 HETATM 22 C C12 U0K . . . B 2 -0.121 -4.67 19.982 1 38.33 ? C12 U0K 301 A 1 HETATM 23 C C13 U0K . . . B 2 -1.023 -4.527 21.023 1 39.87 ? C13 U0K 301 A 1 HETATM 24 C C14 U0K . . . B 2 -0.863 -3.788 22.307 1 39.51 ? C14 U0K 301 A 1 HETATM 25 C C15 U0K . . . B 2 -0.767 -5.475 19.044 1 40.97 ? C15 U0K 301 A 1 HETATM 26 C C16 U0K . . . B 2 -3.339 -5.432 21.456 1 52.05 ? C16 U0K 301 A 1 HETATM 27 C C17 U0K . . . B 2 -3.577 -6.918 21.758 1 54.21 ? C17 U0K 301 A 1 HETATM 28 C C18 U0K . . . B 2 -4.252 -7.381 20.474 1 58.63 ? C18 U0K 301 A 1 HETATM 29 C C19 U0K . . . B 2 -4.619 -5.095 20.683 1 57.91 ? C19 U0K 301 A 1 HETATM 30 C C20 U0K . . . B 2 3.118 -5.691 17.612 1 32.5 ? C20 U0K 301 A 1 HETATM 31 C C21 U0K . . . B 2 2.076 -7.396 16.081 1 34.82 ? C21 U0K 301 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 31 #