data_7BK4 # _model_server_result.job_id p4SDy25i3AjkNpabvHUqAw _model_server_result.datetime_utc '2024-10-25 06:29:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bk4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 7BK4 # _exptl.entry_id 7BK4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 363.493 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-[1-(3,5,5,8,8-PENTAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)CYCLOPROPYL]PYRIDINE-3-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.283 _cell.angle_gamma 90 _cell.entry_id 7BK4 _cell.length_a 179.132 _cell.length_b 64.659 _cell.length_c 48.514 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BK4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C24 H29 N O2' _chem_comp.formula_weight 363.493 _chem_comp.id LG2 _chem_comp.mon_nstd_flag . _chem_comp.name '6-[1-(3,5,5,8,8-PENTAMETHYL-5,6,7,8-TETRAHYDRONAPHTHALEN-2-YL)CYCLOPROPYL]PYRIDINE-3-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 LG2 doub 194 n y C1 C6 LG2 sing 195 n y C1 C10 LG2 sing 196 n n C2 C3 LG2 sing 197 n y C2 HC2 LG2 sing 198 n n C3 C4 LG2 doub 199 n y C3 C11 LG2 sing 200 n n C4 C5 LG2 sing 201 n y C4 C27 LG2 sing 202 n n C5 C6 LG2 doub 203 n y C5 HC5 LG2 sing 204 n n C6 C7 LG2 sing 205 n n C7 C8 LG2 sing 206 n n C7 C23 LG2 sing 207 n n C7 C24 LG2 sing 208 n n C8 C9 LG2 sing 209 n n C8 HC81 LG2 sing 210 n n C8 HC82 LG2 sing 211 n n C9 C10 LG2 sing 212 n n C9 HC91 LG2 sing 213 n n C9 HC92 LG2 sing 214 n n C10 C25 LG2 sing 215 n n C10 C26 LG2 sing 216 n n C11 C12 LG2 sing 217 n n C11 C21 LG2 sing 218 n n C11 C22 LG2 sing 219 n n C12 N13 LG2 doub 220 n y C12 C17 LG2 sing 221 n y N13 C14 LG2 sing 222 n y C14 C15 LG2 doub 223 n y C14 HC41 LG2 sing 224 n n C15 C16 LG2 sing 225 n y C15 C18 LG2 sing 226 n n C16 C17 LG2 doub 227 n y C16 HC61 LG2 sing 228 n n C17 HC71 LG2 sing 229 n n C18 O19 LG2 doub 230 n n C18 O20 LG2 sing 231 n n O20 HO02 LG2 sing 232 n n C21 C22 LG2 sing 233 n n C21 H211 LG2 sing 234 n n C21 H212 LG2 sing 235 n n C22 H221 LG2 sing 236 n n C22 H222 LG2 sing 237 n n C23 H231 LG2 sing 238 n n C23 H232 LG2 sing 239 n n C23 H233 LG2 sing 240 n n C24 H241 LG2 sing 241 n n C24 H242 LG2 sing 242 n n C24 H243 LG2 sing 243 n n C25 H251 LG2 sing 244 n n C25 H252 LG2 sing 245 n n C25 H253 LG2 sing 246 n n C26 H261 LG2 sing 247 n n C26 H262 LG2 sing 248 n n C26 H263 LG2 sing 249 n n C27 H271 LG2 sing 250 n n C27 H272 LG2 sing 251 n n C27 H273 LG2 sing 252 n n # _atom_sites.entry_id 7BK4 _atom_sites.fract_transf_matrix[1][1] 0.005582 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000516 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015466 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020701 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 LG2 A 1 501 1 LG2 LIG . F 3 LG2 C 1 501 1 LG2 LIG . G 4 HOH A 1 601 23 HOH HOH . G 4 HOH A 2 602 3 HOH HOH . G 4 HOH A 3 603 30 HOH HOH . G 4 HOH A 4 604 37 HOH HOH . G 4 HOH A 5 605 84 HOH HOH . G 4 HOH A 6 606 67 HOH HOH . G 4 HOH A 7 607 28 HOH HOH . G 4 HOH A 8 608 44 HOH HOH . G 4 HOH A 9 609 32 HOH HOH . G 4 HOH A 10 610 61 HOH HOH . G 4 HOH A 11 611 14 HOH HOH . G 4 HOH A 12 612 2 HOH HOH . G 4 HOH A 13 613 33 HOH HOH . G 4 HOH A 14 614 25 HOH HOH . G 4 HOH A 15 615 86 HOH HOH . G 4 HOH A 16 616 49 HOH HOH . G 4 HOH A 17 617 89 HOH HOH . G 4 HOH A 18 618 13 HOH HOH . G 4 HOH A 19 619 58 HOH HOH . G 4 HOH A 20 620 88 HOH HOH . G 4 HOH A 21 621 46 HOH HOH . G 4 HOH A 22 622 27 HOH HOH . G 4 HOH A 23 623 39 HOH HOH . G 4 HOH A 24 624 1 HOH HOH . G 4 HOH A 25 625 87 HOH HOH . G 4 HOH A 26 626 68 HOH HOH . G 4 HOH A 27 627 40 HOH HOH . G 4 HOH A 28 628 6 HOH HOH . G 4 HOH A 29 629 42 HOH HOH . G 4 HOH A 30 630 34 HOH HOH . G 4 HOH A 31 631 76 HOH HOH . G 4 HOH A 32 632 62 HOH HOH . G 4 HOH A 33 633 73 HOH HOH . G 4 HOH A 34 634 10 HOH HOH . G 4 HOH A 35 635 75 HOH HOH . G 4 HOH A 36 636 83 HOH HOH . G 4 HOH A 37 637 91 HOH HOH . G 4 HOH A 38 638 52 HOH HOH . G 4 HOH A 39 639 80 HOH HOH . G 4 HOH A 40 640 55 HOH HOH . G 4 HOH A 41 641 81 HOH HOH . G 4 HOH A 42 642 45 HOH HOH . G 4 HOH A 43 643 70 HOH HOH . G 4 HOH A 44 644 82 HOH HOH . G 4 HOH A 45 645 71 HOH HOH . G 4 HOH A 46 646 74 HOH HOH . G 4 HOH A 47 647 60 HOH HOH . G 4 HOH A 48 648 54 HOH HOH . H 4 HOH B 1 801 72 HOH HOH . H 4 HOH B 2 802 69 HOH HOH . I 4 HOH C 1 601 31 HOH HOH . I 4 HOH C 2 602 85 HOH HOH . I 4 HOH C 3 603 16 HOH HOH . I 4 HOH C 4 604 18 HOH HOH . I 4 HOH C 5 605 59 HOH HOH . I 4 HOH C 6 606 92 HOH HOH . I 4 HOH C 7 607 63 HOH HOH . I 4 HOH C 8 608 19 HOH HOH . I 4 HOH C 9 609 15 HOH HOH . I 4 HOH C 10 610 21 HOH HOH . I 4 HOH C 11 611 66 HOH HOH . I 4 HOH C 12 612 20 HOH HOH . I 4 HOH C 13 613 53 HOH HOH . I 4 HOH C 14 614 77 HOH HOH . I 4 HOH C 15 615 7 HOH HOH . I 4 HOH C 16 616 78 HOH HOH . I 4 HOH C 17 617 90 HOH HOH . I 4 HOH C 18 618 79 HOH HOH . J 4 HOH D 1 801 12 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LG2 . . . F 3 24.248 20.242 2.308 1 29.22 ? C1 LG2 501 C 1 HETATM 2 C C2 LG2 . . . F 3 23.031 19.89 2.922 1 29.07 ? C2 LG2 501 C 1 HETATM 3 C C3 LG2 . . . F 3 22.428 20.736 3.86 1 27.72 ? C3 LG2 501 C 1 HETATM 4 C C4 LG2 . . . F 3 23.071 21.948 4.205 1 29.42 ? C4 LG2 501 C 1 HETATM 5 C C5 LG2 . . . F 3 24.279 22.29 3.593 1 30.3 ? C5 LG2 501 C 1 HETATM 6 C C6 LG2 . . . F 3 24.876 21.44 2.642 1 28.91 ? C6 LG2 501 C 1 HETATM 7 C C7 LG2 . . . F 3 26.224 21.867 1.989 1 31.96 ? C7 LG2 501 C 1 HETATM 8 C C8 LG2 . . . F 3 26.646 21.052 0.769 1 28.64 ? C8 LG2 501 C 1 HETATM 9 C C9 LG2 . . . F 3 26.293 19.566 0.812 1 29.93 ? C9 LG2 501 C 1 HETATM 10 C C10 LG2 . . . F 3 24.856 19.245 1.255 1 31.19 ? C10 LG2 501 C 1 HETATM 11 C C11 LG2 . . . F 3 21.087 20.264 4.505 1 27.23 ? C11 LG2 501 C 1 HETATM 12 C C12 LG2 . . . F 3 19.931 20.564 3.495 1 26.38 ? C12 LG2 501 C 1 HETATM 13 N N13 LG2 . . . F 3 20.185 21.018 2.276 1 25.92 ? N13 LG2 501 C 1 HETATM 14 C C14 LG2 . . . F 3 19.211 21.275 1.409 1 25.44 ? C14 LG2 501 C 1 HETATM 15 C C15 LG2 . . . F 3 17.868 21.079 1.721 1 23.3 ? C15 LG2 501 C 1 HETATM 16 C C16 LG2 . . . F 3 17.555 20.605 2.993 1 29.14 ? C16 LG2 501 C 1 HETATM 17 C C17 LG2 . . . F 3 18.602 20.353 3.872 1 26.16 ? C17 LG2 501 C 1 HETATM 18 C C18 LG2 . . . F 3 16.762 21.381 0.696 1 27.98 ? C18 LG2 501 C 1 HETATM 19 O O19 LG2 . . . F 3 15.757 20.62 0.568 1 32.3 ? O19 LG2 501 C 1 HETATM 20 O O20 LG2 . . . F 3 16.859 22.396 -0.04 1 34.49 ? O20 LG2 501 C 1 HETATM 21 C C21 LG2 . . . F 3 20.405 18.991 5.03 1 27.25 ? C21 LG2 501 C 1 HETATM 22 C C22 LG2 . . . F 3 21.304 19.797 5.957 1 27.44 ? C22 LG2 501 C 1 HETATM 23 C C23 LG2 . . . F 3 26.132 23.361 1.583 1 31.36 ? C23 LG2 501 C 1 HETATM 24 C C24 LG2 . . . F 3 27.335 21.716 3.061 1 26.99 ? C24 LG2 501 C 1 HETATM 25 C C25 LG2 . . . F 3 24.828 17.814 1.852 1 28.73 ? C25 LG2 501 C 1 HETATM 26 C C26 LG2 . . . F 3 23.962 19.279 -0.011 1 29.47 ? C26 LG2 501 C 1 HETATM 27 C C27 LG2 . . . F 3 22.478 22.935 5.239 1 26.6 ? C27 LG2 501 C 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #