data_7BKA
#
_model_server_result.job_id            t9WAchp9k8e8GTkcQ877rA 
_model_server_result.datetime_utc      '2024-11-23 03:26:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bka 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":202}' 
#
_entry.id    7BKA 
#
_exptl.entry_id    7BKA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          114.14 
_cell.angle_gamma         90 
_cell.entry_id            7BKA 
_cell.length_a            113.67 
_cell.length_b            142.03 
_cell.length_c            77.9 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BKA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,F,G,P 1 1,2 
B,C,H,I,J,K,Q,R 2 1 
D,E,L,M,N,O,S,T 3 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 I N N 
? 3 K N N 
? 3 M N N 
? 3 O N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 106 n n 
S C1 DMS sing 107 n n 
S C2 DMS sing 108 n n 
C1 H11 DMS sing 109 n n 
C1 H12 DMS sing 110 n n 
C1 H13 DMS sing 111 n n 
C2 H21 DMS sing 112 n n 
C2 H22 DMS sing 113 n n 
C2 H23 DMS sing 114 n n 
#
_atom_sites.entry_id                     7BKA 
_atom_sites.fract_transf_matrix[1][1]    0.008797 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003943 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007041 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014067 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 4JC A 1 201 201 4JC DRG . 
G 3 DMS A 1 202 301 DMS DMS . 
H 2 4JC B 1 201 201 4JC DRG . 
I 3 DMS B 1 202 301 DMS DMS . 
J 2 4JC C 1 201 201 4JC DRG . 
K 3 DMS C 1 202 301 DMS DMS . 
L 2 4JC D 1 201 201 4JC DRG . 
M 3 DMS D 1 202 301 DMS DMS . 
N 2 4JC E 1 201 201 4JC DRG . 
O 3 DMS E 1 202 301 DMS DMS . 
P 4 HOH A 1 301 163 HOH HOH . 
P 4 HOH A 2 302 109 HOH HOH . 
P 4 HOH A 3 303 93 HOH HOH . 
P 4 HOH A 4 304 42 HOH HOH . 
P 4 HOH A 5 305 92 HOH HOH . 
P 4 HOH A 6 306 102 HOH HOH . 
P 4 HOH A 7 307 167 HOH HOH . 
P 4 HOH A 8 308 38 HOH HOH . 
P 4 HOH A 9 309 12 HOH HOH . 
P 4 HOH A 10 310 171 HOH HOH . 
P 4 HOH A 11 311 63 HOH HOH . 
P 4 HOH A 12 312 165 HOH HOH . 
P 4 HOH A 13 313 143 HOH HOH . 
P 4 HOH A 14 314 18 HOH HOH . 
P 4 HOH A 15 315 36 HOH HOH . 
P 4 HOH A 16 316 98 HOH HOH . 
P 4 HOH A 17 317 141 HOH HOH . 
P 4 HOH A 18 318 185 HOH HOH . 
P 4 HOH A 19 319 72 HOH HOH . 
P 4 HOH A 20 320 71 HOH HOH . 
P 4 HOH A 21 321 32 HOH HOH . 
P 4 HOH A 22 322 70 HOH HOH . 
P 4 HOH A 23 323 60 HOH HOH . 
P 4 HOH A 24 324 158 HOH HOH . 
P 4 HOH A 25 325 20 HOH HOH . 
P 4 HOH A 26 326 145 HOH HOH . 
P 4 HOH A 27 327 164 HOH HOH . 
P 4 HOH A 28 328 39 HOH HOH . 
P 4 HOH A 29 329 23 HOH HOH . 
P 4 HOH A 30 330 34 HOH HOH . 
P 4 HOH A 31 331 13 HOH HOH . 
P 4 HOH A 32 332 129 HOH HOH . 
P 4 HOH A 33 333 68 HOH HOH . 
P 4 HOH A 34 334 50 HOH HOH . 
P 4 HOH A 35 335 51 HOH HOH . 
P 4 HOH A 36 336 130 HOH HOH . 
P 4 HOH A 37 337 144 HOH HOH . 
P 4 HOH A 38 338 55 HOH HOH . 
P 4 HOH A 39 339 168 HOH HOH . 
P 4 HOH A 40 340 44 HOH HOH . 
P 4 HOH A 41 341 155 HOH HOH . 
P 4 HOH A 42 342 59 HOH HOH . 
P 4 HOH A 43 343 57 HOH HOH . 
P 4 HOH A 44 344 138 HOH HOH . 
Q 4 HOH B 1 301 80 HOH HOH . 
Q 4 HOH B 2 302 75 HOH HOH . 
Q 4 HOH B 3 303 24 HOH HOH . 
Q 4 HOH B 4 304 111 HOH HOH . 
Q 4 HOH B 5 305 10 HOH HOH . 
Q 4 HOH B 6 306 175 HOH HOH . 
Q 4 HOH B 7 307 26 HOH HOH . 
Q 4 HOH B 8 308 89 HOH HOH . 
Q 4 HOH B 9 309 125 HOH HOH . 
Q 4 HOH B 10 310 169 HOH HOH . 
Q 4 HOH B 11 311 41 HOH HOH . 
Q 4 HOH B 12 312 179 HOH HOH . 
Q 4 HOH B 13 313 151 HOH HOH . 
Q 4 HOH B 14 314 22 HOH HOH . 
Q 4 HOH B 15 315 77 HOH HOH . 
Q 4 HOH B 16 316 112 HOH HOH . 
Q 4 HOH B 17 317 126 HOH HOH . 
Q 4 HOH B 18 318 25 HOH HOH . 
Q 4 HOH B 19 319 4 HOH HOH . 
Q 4 HOH B 20 320 90 HOH HOH . 
Q 4 HOH B 21 321 147 HOH HOH . 
Q 4 HOH B 22 322 159 HOH HOH . 
Q 4 HOH B 23 323 16 HOH HOH . 
Q 4 HOH B 24 324 9 HOH HOH . 
Q 4 HOH B 25 325 116 HOH HOH . 
Q 4 HOH B 26 326 180 HOH HOH . 
Q 4 HOH B 27 327 106 HOH HOH . 
Q 4 HOH B 28 328 19 HOH HOH . 
Q 4 HOH B 29 329 66 HOH HOH . 
Q 4 HOH B 30 330 115 HOH HOH . 
Q 4 HOH B 31 331 197 HOH HOH . 
Q 4 HOH B 32 332 184 HOH HOH . 
Q 4 HOH B 33 333 192 HOH HOH . 
Q 4 HOH B 34 334 83 HOH HOH . 
Q 4 HOH B 35 335 122 HOH HOH . 
Q 4 HOH B 36 336 84 HOH HOH . 
Q 4 HOH B 37 337 160 HOH HOH . 
Q 4 HOH B 38 338 181 HOH HOH . 
Q 4 HOH B 39 339 146 HOH HOH . 
Q 4 HOH B 40 340 110 HOH HOH . 
Q 4 HOH B 41 341 43 HOH HOH . 
Q 4 HOH B 42 342 131 HOH HOH . 
Q 4 HOH B 43 343 82 HOH HOH . 
R 4 HOH C 1 301 124 HOH HOH . 
R 4 HOH C 2 302 134 HOH HOH . 
R 4 HOH C 3 303 193 HOH HOH . 
R 4 HOH C 4 304 152 HOH HOH . 
R 4 HOH C 5 305 99 HOH HOH . 
R 4 HOH C 6 306 64 HOH HOH . 
R 4 HOH C 7 307 189 HOH HOH . 
R 4 HOH C 8 308 52 HOH HOH . 
R 4 HOH C 9 309 61 HOH HOH . 
R 4 HOH C 10 310 172 HOH HOH . 
R 4 HOH C 11 311 188 HOH HOH . 
R 4 HOH C 12 312 40 HOH HOH . 
R 4 HOH C 13 313 174 HOH HOH . 
R 4 HOH C 14 314 8 HOH HOH . 
R 4 HOH C 15 315 91 HOH HOH . 
R 4 HOH C 16 316 94 HOH HOH . 
R 4 HOH C 17 317 79 HOH HOH . 
R 4 HOH C 18 318 183 HOH HOH . 
R 4 HOH C 19 319 120 HOH HOH . 
R 4 HOH C 20 320 46 HOH HOH . 
R 4 HOH C 21 321 31 HOH HOH . 
R 4 HOH C 22 322 76 HOH HOH . 
R 4 HOH C 23 323 154 HOH HOH . 
R 4 HOH C 24 324 88 HOH HOH . 
R 4 HOH C 25 325 140 HOH HOH . 
S 4 HOH D 1 301 162 HOH HOH . 
S 4 HOH D 2 302 49 HOH HOH . 
S 4 HOH D 3 303 73 HOH HOH . 
S 4 HOH D 4 304 133 HOH HOH . 
S 4 HOH D 5 305 27 HOH HOH . 
S 4 HOH D 6 306 30 HOH HOH . 
S 4 HOH D 7 307 156 HOH HOH . 
S 4 HOH D 8 308 96 HOH HOH . 
S 4 HOH D 9 309 114 HOH HOH . 
S 4 HOH D 10 310 173 HOH HOH . 
S 4 HOH D 11 311 149 HOH HOH . 
S 4 HOH D 12 312 100 HOH HOH . 
S 4 HOH D 13 313 190 HOH HOH . 
S 4 HOH D 14 314 105 HOH HOH . 
S 4 HOH D 15 315 176 HOH HOH . 
S 4 HOH D 16 316 177 HOH HOH . 
S 4 HOH D 17 317 81 HOH HOH . 
S 4 HOH D 18 318 62 HOH HOH . 
S 4 HOH D 19 319 47 HOH HOH . 
S 4 HOH D 20 320 87 HOH HOH . 
S 4 HOH D 21 321 142 HOH HOH . 
S 4 HOH D 22 322 187 HOH HOH . 
S 4 HOH D 23 323 182 HOH HOH . 
S 4 HOH D 24 324 101 HOH HOH . 
S 4 HOH D 25 325 194 HOH HOH . 
S 4 HOH D 26 326 153 HOH HOH . 
S 4 HOH D 27 327 33 HOH HOH . 
S 4 HOH D 28 328 67 HOH HOH . 
S 4 HOH D 29 329 74 HOH HOH . 
S 4 HOH D 30 330 95 HOH HOH . 
S 4 HOH D 31 331 104 HOH HOH . 
S 4 HOH D 32 332 195 HOH HOH . 
S 4 HOH D 33 333 108 HOH HOH . 
S 4 HOH D 34 334 118 HOH HOH . 
S 4 HOH D 35 335 35 HOH HOH . 
S 4 HOH D 36 336 54 HOH HOH . 
S 4 HOH D 37 337 103 HOH HOH . 
S 4 HOH D 38 338 139 HOH HOH . 
S 4 HOH D 39 339 135 HOH HOH . 
T 4 HOH E 1 301 69 HOH HOH . 
T 4 HOH E 2 302 56 HOH HOH . 
T 4 HOH E 3 303 161 HOH HOH . 
T 4 HOH E 4 304 14 HOH HOH . 
T 4 HOH E 5 305 150 HOH HOH . 
T 4 HOH E 6 306 170 HOH HOH . 
T 4 HOH E 7 307 186 HOH HOH . 
T 4 HOH E 8 308 121 HOH HOH . 
T 4 HOH E 9 309 148 HOH HOH . 
T 4 HOH E 10 310 127 HOH HOH . 
T 4 HOH E 11 311 137 HOH HOH . 
T 4 HOH E 12 312 117 HOH HOH . 
T 4 HOH E 13 313 45 HOH HOH . 
T 4 HOH E 14 314 86 HOH HOH . 
T 4 HOH E 15 315 166 HOH HOH . 
T 4 HOH E 16 316 17 HOH HOH . 
T 4 HOH E 17 317 123 HOH HOH . 
T 4 HOH E 18 318 78 HOH HOH . 
T 4 HOH E 19 319 191 HOH HOH . 
T 4 HOH E 20 320 157 HOH HOH . 
T 4 HOH E 21 321 29 HOH HOH . 
T 4 HOH E 22 322 21 HOH HOH . 
T 4 HOH E 23 323 37 HOH HOH . 
T 4 HOH E 24 324 196 HOH HOH . 
T 4 HOH E 25 325 128 HOH HOH . 
T 4 HOH E 26 326 107 HOH HOH . 
T 4 HOH E 27 327 113 HOH HOH . 
T 4 HOH E 28 328 178 HOH HOH . 
T 4 HOH E 29 329 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . I 3 30.429 19.813 12.791 1 41.17 ? S DMS 202 B 1 
HETATM 2 O O DMS . . . I 3 30.959 19.132 11.544 1 37.57 ? O DMS 202 B 1 
HETATM 3 C C1 DMS . . . I 3 30.095 21.479 12.311 1 43.27 ? C1 DMS 202 B 1 
HETATM 4 C C2 DMS . . . I 3 31.876 20.177 13.783 1 46.81 ? C2 DMS 202 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#