data_7BL1 # _model_server_result.job_id HGTVN8XKqIJ1j8Ei2x1prA _model_server_result.datetime_utc '2025-03-26 16:25:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bl1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":200}' # _entry.id 7BL1 # _exptl.entry_id 7BL1 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 523.18 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BL1 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BL1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 F OG SER 19 DDD SER 34 1_555 H MG MG . DDD MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc2 F OG1 THR 37 DDD THR 52 1_555 H MG MG . DDD MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc3 G O2G GTP . DDD GTP 200 1_555 H MG MG . DDD MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc4 G O2B GTP . DDD GTP 200 1_555 H MG MG . DDD MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? # _chem_comp.formula 'C10 H16 N5 O14 P3' _chem_comp.formula_weight 523.18 _chem_comp.id GTP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G GTP doub 129 n n PG O2G GTP sing 130 n n PG O3G GTP sing 131 n n PG O3B GTP sing 132 n n O2G HOG2 GTP sing 133 n n O3G HOG3 GTP sing 134 n n O3B PB GTP sing 135 n n PB O1B GTP doub 136 n n PB O2B GTP sing 137 n n PB O3A GTP sing 138 n n O2B HOB2 GTP sing 139 n n O3A PA GTP sing 140 n n PA O1A GTP doub 141 n n PA O2A GTP sing 142 n n PA O5' GTP sing 143 n n O2A HOA2 GTP sing 144 n n O5' C5' GTP sing 145 n n C5' C4' GTP sing 146 n n C5' H5' GTP sing 147 n n C5' "H5''" GTP sing 148 n n C4' O4' GTP sing 149 n n C4' C3' GTP sing 150 n n C4' H4' GTP sing 151 n n O4' C1' GTP sing 152 n n C3' O3' GTP sing 153 n n C3' C2' GTP sing 154 n n C3' H3' GTP sing 155 n n O3' HO3' GTP sing 156 n n C2' O2' GTP sing 157 n n C2' C1' GTP sing 158 n n C2' H2' GTP sing 159 n n O2' HO2' GTP sing 160 n n C1' N9 GTP sing 161 n n C1' H1' GTP sing 162 n n N9 C8 GTP sing 163 n y N9 C4 GTP sing 164 n y C8 N7 GTP doub 165 n y C8 H8 GTP sing 166 n n N7 C5 GTP sing 167 n y C5 C6 GTP sing 168 n n C5 C4 GTP doub 169 n y C6 O6 GTP doub 170 n n C6 N1 GTP sing 171 n n N1 C2 GTP sing 172 n n N1 HN1 GTP sing 173 n n C2 N2 GTP sing 174 n n C2 N3 GTP doub 175 n n N2 HN21 GTP sing 176 n n N2 HN22 GTP sing 177 n n N3 C4 GTP sing 178 n n # _atom_sites.entry_id 7BL1 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 GTP DDD 1 200 200 GTP GTP . H 8 MG DDD 1 201 201 MG MG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG GTP . . . G 7 177.819 198.247 197.263 1 36.15 0 PG GTP 200 DDD 1 HETATM 2 O O1G GTP . . . G 7 177.224 197.251 198.24 1 33.58 0 O1G GTP 200 DDD 1 HETATM 3 O O2G GTP . . . G 7 176.731 199.058 196.587 1 30.46 0 O2G GTP 200 DDD 1 HETATM 4 O O3G GTP . . . G 7 178.636 197.49 196.233 1 33.44 0 O3G GTP 200 DDD 1 HETATM 5 O O3B GTP . . . G 7 178.777 199.223 198.162 1 27.47 0 O3B GTP 200 DDD 1 HETATM 6 P PB GTP . . . G 7 179.518 200.578 197.669 1 26.82 0 PB GTP 200 DDD 1 HETATM 7 O O1B GTP . . . G 7 180.887 200.264 197.133 1 24.12 0 O1B GTP 200 DDD 1 HETATM 8 O O2B GTP . . . G 7 178.678 201.396 196.724 1 21.89 0 O2B GTP 200 DDD 1 HETATM 9 O O3A GTP . . . G 7 179.772 201.37 199.053 1 30.89 0 O3A GTP 200 DDD 1 HETATM 10 P PA GTP . . . G 7 178.924 202.655 199.593 1 35.33 0 PA GTP 200 DDD 1 HETATM 11 O O1A GTP . . . G 7 179.112 203.873 198.746 1 31.49 0 O1A GTP 200 DDD 1 HETATM 12 O O2A GTP . . . G 7 177.456 202.352 199.815 1 31.49 0 O2A GTP 200 DDD 1 HETATM 13 O O5' GTP . . . G 7 179.651 202.868 201.024 1 48.21 0 O5' GTP 200 DDD 1 HETATM 14 C C5' GTP . . . G 7 179.557 201.879 202.071 1 57.31 0 C5' GTP 200 DDD 1 HETATM 15 C C4' GTP . . . G 7 179.785 202.6 203.39 1 64.52 0 C4' GTP 200 DDD 1 HETATM 16 O O4' GTP . . . G 7 181.084 203.224 203.423 1 66.82 0 O4' GTP 200 DDD 1 HETATM 17 C C3' GTP . . . G 7 178.772 203.718 203.636 1 65.83 0 C3' GTP 200 DDD 1 HETATM 18 O O3' GTP . . . G 7 178.528 203.817 205.028 1 69.16 0 O3' GTP 200 DDD 1 HETATM 19 C C2' GTP . . . G 7 179.531 204.971 203.206 1 65.85 0 C2' GTP 200 DDD 1 HETATM 20 O O2' GTP . . . G 7 179.038 206.121 203.844 1 63.47 0 O2' GTP 200 DDD 1 HETATM 21 C C1' GTP . . . G 7 180.956 204.612 203.623 1 66.18 0 C1' GTP 200 DDD 1 HETATM 22 N N9 GTP . . . G 7 181.989 205.337 202.871 1 64.58 0 N9 GTP 200 DDD 1 HETATM 23 C C8 GTP . . . G 7 182.072 205.477 201.505 1 63.73 0 C8 GTP 200 DDD 1 HETATM 24 N N7 GTP . . . G 7 183.158 206.206 201.201 1 63.27 0 N7 GTP 200 DDD 1 HETATM 25 C C5 GTP . . . G 7 183.791 206.548 202.363 1 62.21 0 C5 GTP 200 DDD 1 HETATM 26 C C6 GTP . . . G 7 184.952 207.301 202.608 1 61.85 0 C6 GTP 200 DDD 1 HETATM 27 O O6 GTP . . . G 7 185.598 207.791 201.689 1 60.12 0 O6 GTP 200 DDD 1 HETATM 28 N N1 GTP . . . G 7 185.364 207.478 203.928 1 60.87 0 N1 GTP 200 DDD 1 HETATM 29 C C2 GTP . . . G 7 184.616 206.926 204.956 1 62.59 0 C2 GTP 200 DDD 1 HETATM 30 N N2 GTP . . . G 7 184.998 207.095 206.221 1 61.35 0 N2 GTP 200 DDD 1 HETATM 31 N N3 GTP . . . G 7 183.479 206.197 204.703 1 64.28 0 N3 GTP 200 DDD 1 HETATM 32 C C4 GTP . . . G 7 183.072 206.014 203.414 1 64.33 0 C4 GTP 200 DDD 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 32 #