data_7BLI # _model_server_result.job_id BmZFtSlMvm54IVRZEoyXdA _model_server_result.datetime_utc '2025-02-17 01:54:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bli # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 7BLI # _exptl.entry_id 7BLI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 366.54 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BLI _cell.length_a 60.392 _cell.length_b 73.507 _cell.length_c 78.952 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BLI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf3 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? disulf ? disulf4 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf5 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf6 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 C C1 NAG . A NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? # _chem_comp.formula 'C24 H34 N2 O' _chem_comp.formula_weight 366.54 _chem_comp.id BEP _chem_comp.mon_nstd_flag . _chem_comp.name '1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BEPRIDIL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BEP sing 70 n n C1 O1 BEP sing 71 n n C1 H11 BEP sing 72 n n C1 H12 BEP sing 73 n n C2 C3 BEP sing 74 n n C2 N2 BEP sing 75 n n C2 H21 BEP sing 76 n n C3 N3 BEP sing 77 n n C3 H31 BEP sing 78 n n C3 H32 BEP sing 79 n n O1 C4 BEP sing 80 n n N2 C8 BEP sing 81 n n N2 C11 BEP sing 82 n n N3 C12 BEP sing 83 n n N3 C19 BEP sing 84 n n C4 C5 BEP sing 85 n n C4 H41 BEP sing 86 n n C4 H42 BEP sing 87 n n C5 C6 BEP sing 88 n n C5 C7 BEP sing 89 n n C5 H51 BEP sing 90 n n C6 H61 BEP sing 91 n n C6 H62 BEP sing 92 n n C6 H63 BEP sing 93 n n C7 H71 BEP sing 94 n n C7 H72 BEP sing 95 n n C7 H73 BEP sing 96 n n C8 C9 BEP sing 97 n n C8 H81 BEP sing 98 n n C8 H82 BEP sing 99 n n C9 C10 BEP sing 100 n n C9 H91 BEP sing 101 n n C9 H92 BEP sing 102 n n C10 C11 BEP sing 103 n n C10 H101 BEP sing 104 n n C10 H102 BEP sing 105 n n C11 H111 BEP sing 106 n n C11 H112 BEP sing 107 n n C12 C13 BEP sing 108 n n C12 H121 BEP sing 109 n n C12 H122 BEP sing 110 n n C13 C14 BEP doub 111 n y C13 C18 BEP sing 112 n y C14 C15 BEP sing 113 n y C14 H141 BEP sing 114 n n C15 C16 BEP doub 115 n y C15 H151 BEP sing 116 n n C16 C17 BEP sing 117 n y C16 H161 BEP sing 118 n n C17 C18 BEP doub 119 n y C17 H171 BEP sing 120 n n C18 H181 BEP sing 121 n n C19 C20 BEP doub 122 n y C19 C24 BEP sing 123 n y C20 C21 BEP sing 124 n y C20 H201 BEP sing 125 n n C21 C22 BEP doub 126 n y C21 H211 BEP sing 127 n n C22 C23 BEP sing 128 n y C22 H221 BEP sing 129 n n C23 C24 BEP doub 130 n y C23 H231 BEP sing 131 n n C24 H241 BEP sing 132 n n # _atom_sites.entry_id 7BLI _atom_sites.fract_transf_matrix[1][1] 0.016558 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 501 602 SO4 SO4 . C 3 NAG A 1 502 1452 NAG NAG . D 4 BEP A 1 503 1501 BEP XXX . E 2 SO4 A 1 504 8 SO4 SO4 . F 2 SO4 A 1 505 10 SO4 SO4 . G 2 SO4 A 1 506 13 SO4 SO4 . H 2 SO4 A 1 507 14 SO4 SO4 . I 5 DMS A 1 508 2 DMS DMS . J 5 DMS A 1 509 3 DMS DMS . K 6 HOH A 1 601 1086 HOH HOH . K 6 HOH A 2 602 43 HOH HOH . K 6 HOH A 3 603 59 HOH HOH . K 6 HOH A 4 604 22 HOH HOH . K 6 HOH A 5 605 1191 HOH HOH . K 6 HOH A 6 606 1045 HOH HOH . K 6 HOH A 7 607 1159 HOH HOH . K 6 HOH A 8 608 1196 HOH HOH . K 6 HOH A 9 609 1046 HOH HOH . K 6 HOH A 10 610 1003 HOH HOH . K 6 HOH A 11 611 1097 HOH HOH . K 6 HOH A 12 612 18 HOH HOH . K 6 HOH A 13 613 1073 HOH HOH . K 6 HOH A 14 614 1027 HOH HOH . K 6 HOH A 15 615 1070 HOH HOH . K 6 HOH A 16 616 23 HOH HOH . K 6 HOH A 17 617 1008 HOH HOH . K 6 HOH A 18 618 1118 HOH HOH . K 6 HOH A 19 619 1036 HOH HOH . K 6 HOH A 20 620 1018 HOH HOH . K 6 HOH A 21 621 1001 HOH HOH . K 6 HOH A 22 622 1197 HOH HOH . K 6 HOH A 23 623 1123 HOH HOH . K 6 HOH A 24 624 1149 HOH HOH . K 6 HOH A 25 625 12 HOH HOH . K 6 HOH A 26 626 1082 HOH HOH . K 6 HOH A 27 627 1033 HOH HOH . K 6 HOH A 28 628 1048 HOH HOH . K 6 HOH A 29 629 1050 HOH HOH . K 6 HOH A 30 630 1031 HOH HOH . K 6 HOH A 31 631 1043 HOH HOH . K 6 HOH A 32 632 1064 HOH HOH . K 6 HOH A 33 633 1012 HOH HOH . K 6 HOH A 34 634 1051 HOH HOH . K 6 HOH A 35 635 1169 HOH HOH . K 6 HOH A 36 636 1058 HOH HOH . K 6 HOH A 37 637 1023 HOH HOH . K 6 HOH A 38 638 1040 HOH HOH . K 6 HOH A 39 639 1019 HOH HOH . K 6 HOH A 40 640 1029 HOH HOH . K 6 HOH A 41 641 1004 HOH HOH . K 6 HOH A 42 642 11 HOH HOH . K 6 HOH A 43 643 1190 HOH HOH . K 6 HOH A 44 644 1087 HOH HOH . K 6 HOH A 45 645 1026 HOH HOH . K 6 HOH A 46 646 1093 HOH HOH . K 6 HOH A 47 647 34 HOH HOH . K 6 HOH A 48 648 1007 HOH HOH . K 6 HOH A 49 649 1068 HOH HOH . K 6 HOH A 50 650 1054 HOH HOH . K 6 HOH A 51 651 1065 HOH HOH . K 6 HOH A 52 652 1037 HOH HOH . K 6 HOH A 53 653 1016 HOH HOH . K 6 HOH A 54 654 1063 HOH HOH . K 6 HOH A 55 655 1038 HOH HOH . K 6 HOH A 56 656 1109 HOH HOH . K 6 HOH A 57 657 64 HOH HOH . K 6 HOH A 58 658 1114 HOH HOH . K 6 HOH A 59 659 1067 HOH HOH . K 6 HOH A 60 660 1002 HOH HOH . K 6 HOH A 61 661 1133 HOH HOH . K 6 HOH A 62 662 1052 HOH HOH . K 6 HOH A 63 663 1074 HOH HOH . K 6 HOH A 64 664 1015 HOH HOH . K 6 HOH A 65 665 1091 HOH HOH . K 6 HOH A 66 666 1059 HOH HOH . K 6 HOH A 67 667 1078 HOH HOH . K 6 HOH A 68 668 67 HOH HOH . K 6 HOH A 69 669 1062 HOH HOH . K 6 HOH A 70 670 1005 HOH HOH . K 6 HOH A 71 671 1020 HOH HOH . K 6 HOH A 72 672 29 HOH HOH . K 6 HOH A 73 673 1120 HOH HOH . K 6 HOH A 74 674 1006 HOH HOH . K 6 HOH A 75 675 1115 HOH HOH . K 6 HOH A 76 676 1098 HOH HOH . K 6 HOH A 77 677 1014 HOH HOH . K 6 HOH A 78 678 1083 HOH HOH . K 6 HOH A 79 679 1041 HOH HOH . K 6 HOH A 80 680 1030 HOH HOH . K 6 HOH A 81 681 1017 HOH HOH . K 6 HOH A 82 682 30 HOH HOH . K 6 HOH A 83 683 1011 HOH HOH . K 6 HOH A 84 684 7 HOH HOH . K 6 HOH A 85 685 1013 HOH HOH . K 6 HOH A 86 686 1010 HOH HOH . K 6 HOH A 87 687 1039 HOH HOH . K 6 HOH A 88 688 1035 HOH HOH . K 6 HOH A 89 689 48 HOH HOH . K 6 HOH A 90 690 1140 HOH HOH . K 6 HOH A 91 691 4 HOH HOH . K 6 HOH A 92 692 1125 HOH HOH . K 6 HOH A 93 693 1079 HOH HOH . K 6 HOH A 94 694 1042 HOH HOH . K 6 HOH A 95 695 1077 HOH HOH . K 6 HOH A 96 696 13 HOH HOH . K 6 HOH A 97 697 1198 HOH HOH . K 6 HOH A 98 698 1080 HOH HOH . K 6 HOH A 99 699 1081 HOH HOH . K 6 HOH A 100 700 1092 HOH HOH . K 6 HOH A 101 701 1106 HOH HOH . K 6 HOH A 102 702 1113 HOH HOH . K 6 HOH A 103 703 1155 HOH HOH . K 6 HOH A 104 704 1066 HOH HOH . K 6 HOH A 105 705 1180 HOH HOH . K 6 HOH A 106 706 42 HOH HOH . K 6 HOH A 107 707 1112 HOH HOH . K 6 HOH A 108 708 33 HOH HOH . K 6 HOH A 109 709 1153 HOH HOH . K 6 HOH A 110 710 1152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BEP . . . D 4 2.193 -6.784 8.637 1 28.08 ? C1 BEP 503 A 1 HETATM 2 C C2 BEP . . . D 4 1.037 -6.828 9.672 1 29.54 ? C2 BEP 503 A 1 HETATM 3 C C3 BEP . . . D 4 -0.196 -6.157 9.06 1 28.95 ? C3 BEP 503 A 1 HETATM 4 O O1 BEP . . . D 4 2.462 -5.468 8.185 1 26.22 ? O1 BEP 503 A 1 HETATM 5 N N2 BEP . . . D 4 1.305 -6.338 10.774 1 30.25 ? N2 BEP 503 A 1 HETATM 6 N N3 BEP . . . D 4 -0.944 -6.943 8.074 1 27.6 ? N3 BEP 503 A 1 HETATM 7 C C4 BEP . . . D 4 3.374 -5.452 7.104 1 25.24 ? C4 BEP 503 A 1 HETATM 8 C C5 BEP . . . D 4 3.907 -4.062 6.734 1 25.7 ? C5 BEP 503 A 1 HETATM 9 C C6 BEP . . . D 4 2.836 -3.177 6.085 1 26.28 ? C6 BEP 503 A 1 HETATM 10 C C7 BEP . . . D 4 5.067 -4.266 5.763 1 25.4 ? C7 BEP 503 A 1 HETATM 11 C C8 BEP . . . D 4 0.594 -7.002 11.931 1 30.02 ? C8 BEP 503 A 1 HETATM 12 C C9 BEP . . . D 4 1.393 -6.564 13.186 1 30.35 ? C9 BEP 503 A 1 HETATM 13 C C10 BEP . . . D 4 2.568 -6.347 12.781 1 30.85 ? C10 BEP 503 A 1 HETATM 14 C C11 BEP . . . D 4 2.533 -6.276 11.152 1 30.72 ? C11 BEP 503 A 1 HETATM 15 C C12 BEP . . . D 4 -1.809 -8.012 8.551 1 28.28 ? C12 BEP 503 A 1 HETATM 16 C C13 BEP . . . D 4 -1.368 -9.436 8.216 1 29.56 ? C13 BEP 503 A 1 HETATM 17 C C14 BEP . . . D 4 -2.108 -10.488 8.731 1 29.99 ? C14 BEP 503 A 1 HETATM 18 C C15 BEP . . . D 4 -1.738 -11.793 8.451 1 30.62 ? C15 BEP 503 A 1 HETATM 19 C C16 BEP . . . D 4 -0.614 -12.02 7.673 1 30.44 ? C16 BEP 503 A 1 HETATM 20 C C17 BEP . . . D 4 0.127 -10.975 7.147 1 30.36 ? C17 BEP 503 A 1 HETATM 21 C C18 BEP . . . D 4 -0.247 -9.67 7.424 1 30.5 ? C18 BEP 503 A 1 HETATM 22 C C19 BEP . . . D 4 -0.941 -6.55 6.658 1 26.44 ? C19 BEP 503 A 1 HETATM 23 C C20 BEP . . . D 4 -0.187 -5.455 6.237 1 26.38 ? C20 BEP 503 A 1 HETATM 24 C C21 BEP . . . D 4 -0.202 -5.06 4.9 1 26.45 ? C21 BEP 503 A 1 HETATM 25 C C22 BEP . . . D 4 -0.979 -5.744 3.981 1 26.46 ? C22 BEP 503 A 1 HETATM 26 C C23 BEP . . . D 4 -1.741 -6.826 4.386 1 26.03 ? C23 BEP 503 A 1 HETATM 27 C C24 BEP . . . D 4 -1.724 -7.224 5.723 1 25.87 ? C24 BEP 503 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #