data_7BLJ # _model_server_result.job_id Wvg5DKNnpmFE0mYWxhtY4w _model_server_result.datetime_utc '2024-11-15 00:27:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7blj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7BLJ # _exptl.entry_id 7BLJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 119.119 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description THREONINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BLJ _cell.length_a 35.541 _cell.length_b 64.965 _cell.length_c 70.603 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BLJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 GAL A2G C1 O1 . O3 HO3 . sing 2 ? 2 3 1 NAG A2G C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B A2G 1 B 1 A2G B 2 A2G 2 n B GAL 2 B 2 GAL B 3 GAL 2 n B NAG 3 B 3 NAG B 4 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D OG1 THR . A THR 202 1_555 B C1 A2G . B A2G 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? covale ? covale2 B O3 A2G . B A2G 1 1_555 B C1 GAL . B GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale3 B O6 A2G . B A2G 1 1_555 B C1 NAG . B NAG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? metalc ? metalc1 A O LYS 43 A LYS 43 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc2 A OD1 ASP 46 A ASP 46 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc3 A O ASP 48 A ASP 48 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc4 A O THR 51 A THR 51 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc5 A OG1 THR 51 A THR 51 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc6 A O ALA 155 A ALA 155 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc7 A OE2 GLU 156 A GLU 156 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? # _chem_comp.formula 'C4 H9 N O3' _chem_comp.formula_weight 119.119 _chem_comp.id THR _chem_comp.mon_nstd_flag y _chem_comp.name THREONINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA THR sing 383 n n N H THR sing 384 n n N H2 THR sing 385 n n CA C THR sing 386 n n CA CB THR sing 387 n n CA HA THR sing 388 n n C O THR doub 389 n n C OXT THR sing 390 n n CB OG1 THR sing 391 n n CB CG2 THR sing 392 n n CB HB THR sing 393 n n OG1 HG1 THR sing 394 n n CG2 HG21 THR sing 395 n n CG2 HG22 THR sing 396 n n CG2 HG23 THR sing 397 n n OXT HXT THR sing 398 n n # _atom_sites.entry_id 7BLJ _atom_sites.fract_transf_matrix[1][1] 0.028137 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015393 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014164 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 201 201 EDO EDO . D 4 THR A 1 202 1 THR THR . E 5 CA A 1 203 1 CA CA . F 6 HOH A 1 301 60 HOH HOH . F 6 HOH A 2 302 63 HOH HOH . F 6 HOH A 3 303 113 HOH HOH . F 6 HOH A 4 304 86 HOH HOH . F 6 HOH A 5 305 129 HOH HOH . F 6 HOH A 6 306 158 HOH HOH . F 6 HOH A 7 307 97 HOH HOH . F 6 HOH A 8 308 82 HOH HOH . F 6 HOH A 9 309 151 HOH HOH . F 6 HOH A 10 310 20 HOH HOH . F 6 HOH A 11 311 91 HOH HOH . F 6 HOH A 12 312 34 HOH HOH . F 6 HOH A 13 313 26 HOH HOH . F 6 HOH A 14 314 94 HOH HOH . F 6 HOH A 15 315 41 HOH HOH . F 6 HOH A 16 316 93 HOH HOH . F 6 HOH A 17 317 122 HOH HOH . F 6 HOH A 18 318 177 HOH HOH . F 6 HOH A 19 319 208 HOH HOH . F 6 HOH A 20 320 84 HOH HOH . F 6 HOH A 21 321 13 HOH HOH . F 6 HOH A 22 322 95 HOH HOH . F 6 HOH A 23 323 23 HOH HOH . F 6 HOH A 24 324 33 HOH HOH . F 6 HOH A 25 325 154 HOH HOH . F 6 HOH A 26 326 169 HOH HOH . F 6 HOH A 27 327 8 HOH HOH . F 6 HOH A 28 328 99 HOH HOH . F 6 HOH A 29 329 25 HOH HOH . F 6 HOH A 30 330 28 HOH HOH . F 6 HOH A 31 331 81 HOH HOH . F 6 HOH A 32 332 102 HOH HOH . F 6 HOH A 33 333 61 HOH HOH . F 6 HOH A 34 334 71 HOH HOH . F 6 HOH A 35 335 1 HOH HOH . F 6 HOH A 36 336 206 HOH HOH . F 6 HOH A 37 337 142 HOH HOH . F 6 HOH A 38 338 18 HOH HOH . F 6 HOH A 39 339 103 HOH HOH . F 6 HOH A 40 340 204 HOH HOH . F 6 HOH A 41 341 43 HOH HOH . F 6 HOH A 42 342 46 HOH HOH . F 6 HOH A 43 343 31 HOH HOH . F 6 HOH A 44 344 50 HOH HOH . F 6 HOH A 45 345 7 HOH HOH . F 6 HOH A 46 346 75 HOH HOH . F 6 HOH A 47 347 65 HOH HOH . F 6 HOH A 48 348 76 HOH HOH . F 6 HOH A 49 349 4 HOH HOH . F 6 HOH A 50 350 38 HOH HOH . F 6 HOH A 51 351 72 HOH HOH . F 6 HOH A 52 352 19 HOH HOH . F 6 HOH A 53 353 12 HOH HOH . F 6 HOH A 54 354 49 HOH HOH . F 6 HOH A 55 355 166 HOH HOH . F 6 HOH A 56 356 42 HOH HOH . F 6 HOH A 57 357 5 HOH HOH . F 6 HOH A 58 358 114 HOH HOH . F 6 HOH A 59 359 48 HOH HOH . F 6 HOH A 60 360 164 HOH HOH . F 6 HOH A 61 361 155 HOH HOH . F 6 HOH A 62 362 67 HOH HOH . F 6 HOH A 63 363 6 HOH HOH . F 6 HOH A 64 364 146 HOH HOH . F 6 HOH A 65 365 148 HOH HOH . F 6 HOH A 66 366 29 HOH HOH . F 6 HOH A 67 367 32 HOH HOH . F 6 HOH A 68 368 69 HOH HOH . F 6 HOH A 69 369 37 HOH HOH . F 6 HOH A 70 370 53 HOH HOH . F 6 HOH A 71 371 70 HOH HOH . F 6 HOH A 72 372 98 HOH HOH . F 6 HOH A 73 373 83 HOH HOH . F 6 HOH A 74 374 80 HOH HOH . F 6 HOH A 75 375 2 HOH HOH . F 6 HOH A 76 376 140 HOH HOH . F 6 HOH A 77 377 207 HOH HOH . F 6 HOH A 78 378 144 HOH HOH . F 6 HOH A 79 379 172 HOH HOH . F 6 HOH A 80 380 192 HOH HOH . F 6 HOH A 81 381 135 HOH HOH . F 6 HOH A 82 382 24 HOH HOH . F 6 HOH A 83 383 27 HOH HOH . F 6 HOH A 84 384 78 HOH HOH . F 6 HOH A 85 385 203 HOH HOH . F 6 HOH A 86 386 17 HOH HOH . F 6 HOH A 87 387 14 HOH HOH . F 6 HOH A 88 388 134 HOH HOH . F 6 HOH A 89 389 187 HOH HOH . F 6 HOH A 90 390 101 HOH HOH . F 6 HOH A 91 391 108 HOH HOH . F 6 HOH A 92 392 107 HOH HOH . F 6 HOH A 93 393 58 HOH HOH . F 6 HOH A 94 394 68 HOH HOH . F 6 HOH A 95 395 9 HOH HOH . F 6 HOH A 96 396 10 HOH HOH . F 6 HOH A 97 397 3 HOH HOH . F 6 HOH A 98 398 150 HOH HOH . F 6 HOH A 99 399 116 HOH HOH . F 6 HOH A 100 400 64 HOH HOH . F 6 HOH A 101 401 118 HOH HOH . F 6 HOH A 102 402 47 HOH HOH . F 6 HOH A 103 403 73 HOH HOH . F 6 HOH A 104 404 15 HOH HOH . F 6 HOH A 105 405 189 HOH HOH . F 6 HOH A 106 406 117 HOH HOH . F 6 HOH A 107 407 16 HOH HOH . F 6 HOH A 108 408 130 HOH HOH . F 6 HOH A 109 409 153 HOH HOH . F 6 HOH A 110 410 22 HOH HOH . F 6 HOH A 111 411 126 HOH HOH . F 6 HOH A 112 412 57 HOH HOH . F 6 HOH A 113 413 54 HOH HOH . F 6 HOH A 114 414 90 HOH HOH . F 6 HOH A 115 415 167 HOH HOH . F 6 HOH A 116 416 77 HOH HOH . F 6 HOH A 117 417 121 HOH HOH . F 6 HOH A 118 418 35 HOH HOH . F 6 HOH A 119 419 92 HOH HOH . F 6 HOH A 120 420 174 HOH HOH . F 6 HOH A 121 421 186 HOH HOH . F 6 HOH A 122 422 100 HOH HOH . F 6 HOH A 123 423 138 HOH HOH . F 6 HOH A 124 424 52 HOH HOH . F 6 HOH A 125 425 59 HOH HOH . F 6 HOH A 126 426 125 HOH HOH . F 6 HOH A 127 427 21 HOH HOH . F 6 HOH A 128 428 202 HOH HOH . F 6 HOH A 129 429 109 HOH HOH . F 6 HOH A 130 430 184 HOH HOH . F 6 HOH A 131 431 45 HOH HOH . F 6 HOH A 132 432 88 HOH HOH . F 6 HOH A 133 433 119 HOH HOH . F 6 HOH A 134 434 30 HOH HOH . F 6 HOH A 135 435 120 HOH HOH . F 6 HOH A 136 436 149 HOH HOH . F 6 HOH A 137 437 56 HOH HOH . F 6 HOH A 138 438 44 HOH HOH . F 6 HOH A 139 439 39 HOH HOH . F 6 HOH A 140 440 131 HOH HOH . F 6 HOH A 141 441 66 HOH HOH . F 6 HOH A 142 442 104 HOH HOH . F 6 HOH A 143 443 36 HOH HOH . F 6 HOH A 144 444 128 HOH HOH . F 6 HOH A 145 445 106 HOH HOH . F 6 HOH A 146 446 40 HOH HOH . F 6 HOH A 147 447 198 HOH HOH . F 6 HOH A 148 448 123 HOH HOH . F 6 HOH A 149 449 182 HOH HOH . F 6 HOH A 150 450 133 HOH HOH . F 6 HOH A 151 451 62 HOH HOH . F 6 HOH A 152 452 180 HOH HOH . F 6 HOH A 153 453 170 HOH HOH . F 6 HOH A 154 454 11 HOH HOH . F 6 HOH A 155 455 147 HOH HOH . F 6 HOH A 156 456 201 HOH HOH . F 6 HOH A 157 457 137 HOH HOH . F 6 HOH A 158 458 136 HOH HOH . F 6 HOH A 159 459 157 HOH HOH . F 6 HOH A 160 460 193 HOH HOH . F 6 HOH A 161 461 188 HOH HOH . F 6 HOH A 162 462 51 HOH HOH . F 6 HOH A 163 463 200 HOH HOH . F 6 HOH A 164 464 89 HOH HOH . F 6 HOH A 165 465 132 HOH HOH . F 6 HOH A 166 466 105 HOH HOH . F 6 HOH A 167 467 161 HOH HOH . F 6 HOH A 168 468 115 HOH HOH . F 6 HOH A 169 469 127 HOH HOH . F 6 HOH A 170 470 165 HOH HOH . F 6 HOH A 171 471 145 HOH HOH . F 6 HOH A 172 472 79 HOH HOH . F 6 HOH A 173 473 209 HOH HOH . F 6 HOH A 174 474 139 HOH HOH . F 6 HOH A 175 475 183 HOH HOH . F 6 HOH A 176 476 178 HOH HOH . F 6 HOH A 177 477 110 HOH HOH . F 6 HOH A 178 478 194 HOH HOH . F 6 HOH A 179 479 141 HOH HOH . F 6 HOH A 180 480 55 HOH HOH . F 6 HOH A 181 481 191 HOH HOH . F 6 HOH A 182 482 74 HOH HOH . F 6 HOH A 183 483 124 HOH HOH . F 6 HOH A 184 484 163 HOH HOH . F 6 HOH A 185 485 162 HOH HOH . F 6 HOH A 186 486 87 HOH HOH . F 6 HOH A 187 487 176 HOH HOH . F 6 HOH A 188 488 112 HOH HOH . F 6 HOH A 189 489 143 HOH HOH . F 6 HOH A 190 490 156 HOH HOH . F 6 HOH A 191 491 85 HOH HOH . F 6 HOH A 192 492 210 HOH HOH . F 6 HOH A 193 493 160 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N THR . . . D 4 15.152 11.985 -20.631 1 10.86 ? N THR 202 A 1 HETATM 2 C CA THR . . . D 4 16.553 12.241 -20.943 1 11.13 ? CA THR 202 A 1 HETATM 3 C C THR . . . D 4 17.315 10.929 -21.034 1 14.23 ? C THR 202 A 1 HETATM 4 O O THR . . . D 4 18.5 10.92 -21.351 1 14.77 ? O THR 202 A 1 HETATM 5 C CB THR . . . D 4 17.218 13.147 -19.895 1 10.99 ? CB THR 202 A 1 HETATM 6 O OG1 THR . . . D 4 17.165 12.51 -18.61 1 10.16 ? OG1 THR 202 A 1 HETATM 7 C CG2 THR . . . D 4 16.488 14.481 -19.826 1 17.02 ? CG2 THR 202 A 1 HETATM 8 O OXT THR . . . D 4 16.749 9.855 -20.813 1 10.06 ? OXT THR 202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 231 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 8 #