data_7BLO # _model_server_result.job_id R1CgezI5u0-deCVcPvd-aw _model_server_result.datetime_utc '2025-04-14 12:47:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7blo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":201}' # _entry.id 7BLO # _exptl.entry_id 7BLO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 554.374 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(BUTANOYLOXY)-1-{[(HYDROXY{[2,3,4,6-TETRAHYDROXY-5-(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL)OXY]METHYL}ETHYL BUTANOATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B CD1 PHE 94 L PHE 97 1_555 I C7 PIB . L PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.49 ? covale ? covale2 B CE1 PHE 94 L PHE 97 1_555 I O13 PIB . L PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.466 ? covale ? covale3 B CE1 PHE 94 L PHE 97 1_555 I C7 PIB . L PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.077 ? covale ? covale4 B CE2 PHE 94 L PHE 97 1_555 I C7 PIB . L PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.498 ? covale ? covale5 B CZ PHE 94 L PHE 97 1_555 I O13 PIB . L PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? covale ? covale6 B CZ PHE 94 L PHE 97 1_555 I C7 PIB . L PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.087 ? covale ? covale7 E CD1 PHE 94 G PHE 97 1_555 J C7 PIB . G PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.492 ? covale ? covale8 E CE1 PHE 94 G PHE 97 1_555 J C7 PIB . G PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.077 ? covale ? covale9 E CE1 PHE 94 G PHE 97 1_555 J O13 PIB . G PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.466 ? covale ? covale10 E CE2 PHE 94 G PHE 97 1_555 J C7 PIB . G PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.496 ? covale ? covale11 E CZ PHE 94 G PHE 97 1_555 J C7 PIB . G PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.085 ? covale ? covale12 E CZ PHE 94 G PHE 97 1_555 J O13 PIB . G PIB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.296 ? # _chem_comp.formula 'C17 H32 O16 P2' _chem_comp.formula_weight 554.374 _chem_comp.id PIB _chem_comp.mon_nstd_flag . _chem_comp.name '2-(BUTANOYLOXY)-1-{[(HYDROXY{[2,3,4,6-TETRAHYDROXY-5-(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL)OXY]METHYL}ETHYL BUTANOATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'D-MYO-PHOSPHATIDYLINOSITOL 3-PHOSPHATED (+)-SN-1,2-DI-O-BUTANOYLGLYCERYL,3-O-PHOSPHO' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PIB sing 258 n n C1 C6 PIB sing 259 n n C1 O1 PIB sing 260 n n C1 HC1 PIB sing 261 n n C2 C3 PIB sing 262 n n C2 O2 PIB sing 263 n n C2 HC2 PIB sing 264 n n C3 C4 PIB sing 265 n n C3 O3 PIB sing 266 n n C3 HC3 PIB sing 267 n n C4 C5 PIB sing 268 n n C4 O4 PIB sing 269 n n C4 HC4 PIB sing 270 n n C5 C6 PIB sing 271 n n C5 O5 PIB sing 272 n n C5 HC5 PIB sing 273 n n C6 O6 PIB sing 274 n n C6 HC6 PIB sing 275 n n O1 P1 PIB sing 276 n n O2 HO2 PIB sing 277 n n O3 P3 PIB sing 278 n n O4 HO4 PIB sing 279 n n O5 HO5 PIB sing 280 n n O6 HO6 PIB sing 281 n n P1 O11 PIB sing 282 n n P1 O12 PIB doub 283 n n P1 O13 PIB sing 284 n n O11 HO11 PIB sing 285 n n O13 C7 PIB sing 286 n n P3 O31 PIB sing 287 n n P3 O32 PIB doub 288 n n P3 O33 PIB sing 289 n n O31 HO31 PIB sing 290 n n O33 HO33 PIB sing 291 n n C7 C8 PIB sing 292 n n C7 HC71 PIB sing 293 n n C7 HC72 PIB sing 294 n n C8 C9 PIB sing 295 n n C8 O14 PIB sing 296 n n C8 HC8 PIB sing 297 n n C9 O15 PIB sing 298 n n C9 HC91 PIB sing 299 n n C9 HC92 PIB sing 300 n n C10 C11 PIB sing 301 n n C10 O15 PIB sing 302 n n C10 O16 PIB doub 303 n n C11 C12 PIB sing 304 n n C11 H111 PIB sing 305 n n C11 H112 PIB sing 306 n n C12 C13 PIB sing 307 n n C12 H121 PIB sing 308 n n C12 H122 PIB sing 309 n n C13 H131 PIB sing 310 n n C13 H132 PIB sing 311 n n C13 H133 PIB sing 312 n n C14 C15 PIB sing 313 n n C14 O14 PIB sing 314 n n C14 O17 PIB doub 315 n n C15 C16 PIB sing 316 n n C15 H151 PIB sing 317 n n C15 H152 PIB sing 318 n n C16 C17 PIB sing 319 n n C16 H161 PIB sing 320 n n C16 H162 PIB sing 321 n n C17 H171 PIB sing 322 n n C17 H172 PIB sing 323 n n C17 H173 PIB sing 324 n n # _atom_sites.entry_id 7BLO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 PIB L 1 201 1164 PIB PIB . J 5 PIB G 1 201 1164 PIB PIB . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PIB . . . I 5 130.023 73.372 99.717 1 51.16 ? C1 PIB 201 L 1 HETATM 2 C C2 PIB . . . I 5 129.183 72.982 100.957 1 48.81 ? C2 PIB 201 L 1 HETATM 3 C C3 PIB . . . I 5 129.684 71.618 101.486 1 45.52 ? C3 PIB 201 L 1 HETATM 4 C C4 PIB . . . I 5 131.231 71.684 101.854 1 46.32 ? C4 PIB 201 L 1 HETATM 5 C C5 PIB . . . I 5 132.044 72.042 100.562 1 47.91 ? C5 PIB 201 L 1 HETATM 6 C C6 PIB . . . I 5 131.55 73.448 100.053 1 50.06 ? C6 PIB 201 L 1 HETATM 7 O O1 PIB . . . I 5 129.548 74.638 99.261 1 55.01 ? O1 PIB 201 L 1 HETATM 8 O O2 PIB . . . I 5 129.341 73.999 101.944 1 50.8 ? O2 PIB 201 L 1 HETATM 9 O O3 PIB . . . I 5 128.871 71.317 102.612 1 40.57 ? O3 PIB 201 L 1 HETATM 10 O O4 PIB . . . I 5 131.673 70.401 102.333 1 44.39 ? O4 PIB 201 L 1 HETATM 11 O O5 PIB . . . I 5 133.429 72.117 100.869 1 49.24 ? O5 PIB 201 L 1 HETATM 12 O O6 PIB . . . I 5 132.275 73.798 98.874 1 51.53 ? O6 PIB 201 L 1 HETATM 13 P P1 PIB . . . I 5 128.688 74.871 97.959 1 57.64 ? P1 PIB 201 L 1 HETATM 14 O O11 PIB . . . I 5 127.39 73.983 97.969 1 57.15 ? O11 PIB 201 L 1 HETATM 15 O O12 PIB . . . I 5 128.317 76.423 97.93 1 59.01 ? O12 PIB 201 L 1 HETATM 16 O O13 PIB . . . I 5 129.607 74.472 96.685 1 58.02 ? O13 PIB 201 L 1 HETATM 17 P P3 PIB . . . I 5 128.431 69.828 103.032 1 35.16 ? P3 PIB 201 L 1 HETATM 18 O O31 PIB . . . I 5 129.725 69.002 103.388 1 37.57 ? O31 PIB 201 L 1 HETATM 19 O O32 PIB . . . I 5 127.675 69.17 101.799 1 35.68 ? O32 PIB 201 L 1 HETATM 20 O O33 PIB . . . I 5 127.527 69.969 104.311 1 36.49 ? O33 PIB 201 L 1 HETATM 21 C C7 PIB . . . I 5 130.733 75.247 96.292 1 59.92 ? C7 PIB 201 L 1 HETATM 22 C C8 PIB . . . I 5 131.049 74.809 94.869 1 60.74 ? C8 PIB 201 L 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 22 #