data_7BMD # _model_server_result.job_id hAmehEVLl3vBsSHUQ7xxYg _model_server_result.datetime_utc '2024-11-13 03:38:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bmd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":605}' # _entry.id 7BMD # _exptl.entry_id 7BMD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BMD _cell.length_a 60.5 _cell.length_b 73.17 _cell.length_c 79.38 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BMD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf3 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? disulf ? disulf4 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf5 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf6 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 Q C1 NAG . A NAG 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 342 n n S O2 SO4 doub 343 n n S O3 SO4 sing 344 n n S O4 SO4 sing 345 n n # _atom_sites.entry_id 7BMD _atom_sites.fract_transf_matrix[1][1] 0.016529 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013667 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012598 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 601 601 SO4 SO4 . C 2 SO4 A 1 602 602 SO4 SO4 . D 2 SO4 A 1 603 603 SO4 SO4 . E 2 SO4 A 1 604 604 SO4 SO4 . F 2 SO4 A 1 605 605 SO4 SO4 . G 2 SO4 A 1 606 606 SO4 SO4 . H 2 SO4 A 1 607 608 SO4 SO4 . I 2 SO4 A 1 608 609 SO4 SO4 . J 2 SO4 A 1 609 610 SO4 SO4 . K 2 SO4 A 1 610 612 SO4 SO4 . L 2 SO4 A 1 611 613 SO4 SO4 . M 3 GOL A 1 612 704 GOL GOL . N 3 GOL A 1 613 709 GOL GOL . O 3 GOL A 1 614 711 GOL GOL . P 3 GOL A 1 615 713 GOL GOL . Q 4 NAG A 1 616 1101 NAG NAG . R 5 U3W A 1 617 1201 U3W XXX . S 6 DMS A 1 618 1301 DMS DMS . T 7 HOH A 1 701 1 HOH HOH . T 7 HOH A 2 702 836 HOH HOH . T 7 HOH A 3 703 871 HOH HOH . T 7 HOH A 4 704 980 HOH HOH . T 7 HOH A 5 705 875 HOH HOH . T 7 HOH A 6 706 848 HOH HOH . T 7 HOH A 7 707 777 HOH HOH . T 7 HOH A 8 708 783 HOH HOH . T 7 HOH A 9 709 797 HOH HOH . T 7 HOH A 10 710 758 HOH HOH . T 7 HOH A 11 711 946 HOH HOH . T 7 HOH A 12 712 873 HOH HOH . T 7 HOH A 13 713 786 HOH HOH . T 7 HOH A 14 714 796 HOH HOH . T 7 HOH A 15 715 785 HOH HOH . T 7 HOH A 16 716 823 HOH HOH . T 7 HOH A 17 717 800 HOH HOH . T 7 HOH A 18 718 751 HOH HOH . T 7 HOH A 19 719 940 HOH HOH . T 7 HOH A 20 720 801 HOH HOH . T 7 HOH A 21 721 971 HOH HOH . T 7 HOH A 22 722 781 HOH HOH . T 7 HOH A 23 723 795 HOH HOH . T 7 HOH A 24 724 793 HOH HOH . T 7 HOH A 25 725 991 HOH HOH . T 7 HOH A 26 726 846 HOH HOH . T 7 HOH A 27 727 832 HOH HOH . T 7 HOH A 28 728 820 HOH HOH . T 7 HOH A 29 729 841 HOH HOH . T 7 HOH A 30 730 809 HOH HOH . T 7 HOH A 31 731 768 HOH HOH . T 7 HOH A 32 732 754 HOH HOH . T 7 HOH A 33 733 1005 HOH HOH . T 7 HOH A 34 734 837 HOH HOH . T 7 HOH A 35 735 899 HOH HOH . T 7 HOH A 36 736 753 HOH HOH . T 7 HOH A 37 737 847 HOH HOH . T 7 HOH A 38 738 979 HOH HOH . T 7 HOH A 39 739 790 HOH HOH . T 7 HOH A 40 740 947 HOH HOH . T 7 HOH A 41 741 769 HOH HOH . T 7 HOH A 42 742 834 HOH HOH . T 7 HOH A 43 743 868 HOH HOH . T 7 HOH A 44 744 798 HOH HOH . T 7 HOH A 45 745 762 HOH HOH . T 7 HOH A 46 746 814 HOH HOH . T 7 HOH A 47 747 813 HOH HOH . T 7 HOH A 48 748 2 HOH HOH . T 7 HOH A 49 749 1003 HOH HOH . T 7 HOH A 50 750 808 HOH HOH . T 7 HOH A 51 751 960 HOH HOH . T 7 HOH A 52 752 804 HOH HOH . T 7 HOH A 53 753 831 HOH HOH . T 7 HOH A 54 754 812 HOH HOH . T 7 HOH A 55 755 802 HOH HOH . T 7 HOH A 56 756 765 HOH HOH . T 7 HOH A 57 757 779 HOH HOH . T 7 HOH A 58 758 752 HOH HOH . T 7 HOH A 59 759 818 HOH HOH . T 7 HOH A 60 760 766 HOH HOH . T 7 HOH A 61 761 998 HOH HOH . T 7 HOH A 62 762 757 HOH HOH . T 7 HOH A 63 763 3 HOH HOH . T 7 HOH A 64 764 883 HOH HOH . T 7 HOH A 65 765 807 HOH HOH . T 7 HOH A 66 766 760 HOH HOH . T 7 HOH A 67 767 952 HOH HOH . T 7 HOH A 68 768 859 HOH HOH . T 7 HOH A 69 769 776 HOH HOH . T 7 HOH A 70 770 822 HOH HOH . T 7 HOH A 71 771 909 HOH HOH . T 7 HOH A 72 772 982 HOH HOH . T 7 HOH A 73 773 773 HOH HOH . T 7 HOH A 74 774 955 HOH HOH . T 7 HOH A 75 775 756 HOH HOH . T 7 HOH A 76 776 815 HOH HOH . T 7 HOH A 77 777 788 HOH HOH . T 7 HOH A 78 778 864 HOH HOH . T 7 HOH A 79 779 900 HOH HOH . T 7 HOH A 80 780 835 HOH HOH . T 7 HOH A 81 781 824 HOH HOH . T 7 HOH A 82 782 806 HOH HOH . T 7 HOH A 83 783 902 HOH HOH . T 7 HOH A 84 784 770 HOH HOH . T 7 HOH A 85 785 821 HOH HOH . T 7 HOH A 86 786 817 HOH HOH . T 7 HOH A 87 787 767 HOH HOH . T 7 HOH A 88 788 789 HOH HOH . T 7 HOH A 89 789 763 HOH HOH . T 7 HOH A 90 790 755 HOH HOH . T 7 HOH A 91 791 994 HOH HOH . T 7 HOH A 92 792 961 HOH HOH . T 7 HOH A 93 793 787 HOH HOH . T 7 HOH A 94 794 870 HOH HOH . T 7 HOH A 95 795 975 HOH HOH . T 7 HOH A 96 796 780 HOH HOH . T 7 HOH A 97 797 764 HOH HOH . T 7 HOH A 98 798 791 HOH HOH . T 7 HOH A 99 799 843 HOH HOH . T 7 HOH A 100 800 761 HOH HOH . T 7 HOH A 101 801 872 HOH HOH . T 7 HOH A 102 802 828 HOH HOH . T 7 HOH A 103 803 827 HOH HOH . T 7 HOH A 104 804 973 HOH HOH . T 7 HOH A 105 805 856 HOH HOH . T 7 HOH A 106 806 792 HOH HOH . T 7 HOH A 107 807 1006 HOH HOH . T 7 HOH A 108 808 892 HOH HOH . T 7 HOH A 109 809 842 HOH HOH . T 7 HOH A 110 810 865 HOH HOH . T 7 HOH A 111 811 799 HOH HOH . T 7 HOH A 112 812 903 HOH HOH . T 7 HOH A 113 813 830 HOH HOH . T 7 HOH A 114 814 890 HOH HOH . T 7 HOH A 115 815 829 HOH HOH . T 7 HOH A 116 816 976 HOH HOH . T 7 HOH A 117 817 948 HOH HOH . T 7 HOH A 118 818 889 HOH HOH . T 7 HOH A 119 819 981 HOH HOH . T 7 HOH A 120 820 992 HOH HOH . T 7 HOH A 121 821 912 HOH HOH . T 7 HOH A 122 822 985 HOH HOH . T 7 HOH A 123 823 862 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 2 5.144 -23.146 -13.477 1 59.28 ? S SO4 605 A 1 HETATM 2 O O1 SO4 . . . F 2 6.464 -23.701 -13.182 1 102.65 ? O1 SO4 605 A 1 HETATM 3 O O2 SO4 . . . F 2 5.033 -22.887 -14.91 1 86 ? O2 SO4 605 A 1 HETATM 4 O O3 SO4 . . . F 2 4.117 -24.101 -13.071 1 126 ? O3 SO4 605 A 1 HETATM 5 O O4 SO4 . . . F 2 4.962 -21.899 -12.738 1 72.03 ? O4 SO4 605 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #