data_7BNE # _model_server_result.job_id VBoJTcClTYKTdj0nc_fTZQ _model_server_result.datetime_utc '2024-11-16 16:24:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bne # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 7BNE # _exptl.entry_id 7BNE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BNE _cell.length_a 60.29 _cell.length_b 71.69 _cell.length_c 78.17 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BNE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf5 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf6 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? disulf ? disulf7 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 E C1 NAG . A NAG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 360 n n S O2 SO4 doub 361 n n S O3 SO4 sing 362 n n S O4 SO4 sing 363 n n # _atom_sites.entry_id 7BNE _atom_sites.fract_transf_matrix[1][1] 0.016586 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013949 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 502 GOL GOL . C 2 GOL A 1 502 504 GOL GOL . D 3 SO4 A 1 503 551 SO4 SO4 . E 4 NAG A 1 504 901 NAG NAG . F 3 SO4 A 1 505 911 SO4 SO4 . G 5 NCT A 1 506 1 NCT NCT . H 6 HOH A 1 601 769 HOH HOH . H 6 HOH A 2 602 751 HOH HOH . H 6 HOH A 3 603 869 HOH HOH . H 6 HOH A 4 604 820 HOH HOH . H 6 HOH A 5 605 2 HOH HOH . H 6 HOH A 6 606 868 HOH HOH . H 6 HOH A 7 607 712 HOH HOH . H 6 HOH A 8 608 810 HOH HOH . H 6 HOH A 9 609 825 HOH HOH . H 6 HOH A 10 610 847 HOH HOH . H 6 HOH A 11 611 731 HOH HOH . H 6 HOH A 12 612 862 HOH HOH . H 6 HOH A 13 613 861 HOH HOH . H 6 HOH A 14 614 824 HOH HOH . H 6 HOH A 15 615 775 HOH HOH . H 6 HOH A 16 616 846 HOH HOH . H 6 HOH A 17 617 803 HOH HOH . H 6 HOH A 18 618 790 HOH HOH . H 6 HOH A 19 619 828 HOH HOH . H 6 HOH A 20 620 776 HOH HOH . H 6 HOH A 21 621 705 HOH HOH . H 6 HOH A 22 622 827 HOH HOH . H 6 HOH A 23 623 765 HOH HOH . H 6 HOH A 24 624 716 HOH HOH . H 6 HOH A 25 625 701 HOH HOH . H 6 HOH A 26 626 757 HOH HOH . H 6 HOH A 27 627 787 HOH HOH . H 6 HOH A 28 628 783 HOH HOH . H 6 HOH A 29 629 821 HOH HOH . H 6 HOH A 30 630 784 HOH HOH . H 6 HOH A 31 631 815 HOH HOH . H 6 HOH A 32 632 845 HOH HOH . H 6 HOH A 33 633 704 HOH HOH . H 6 HOH A 34 634 837 HOH HOH . H 6 HOH A 35 635 818 HOH HOH . H 6 HOH A 36 636 863 HOH HOH . H 6 HOH A 37 637 839 HOH HOH . H 6 HOH A 38 638 1 HOH HOH . H 6 HOH A 39 639 795 HOH HOH . H 6 HOH A 40 640 864 HOH HOH . H 6 HOH A 41 641 865 HOH HOH . H 6 HOH A 42 642 802 HOH HOH . H 6 HOH A 43 643 708 HOH HOH . H 6 HOH A 44 644 764 HOH HOH . H 6 HOH A 45 645 782 HOH HOH . H 6 HOH A 46 646 711 HOH HOH . H 6 HOH A 47 647 773 HOH HOH . H 6 HOH A 48 648 848 HOH HOH . H 6 HOH A 49 649 853 HOH HOH . H 6 HOH A 50 650 726 HOH HOH . H 6 HOH A 51 651 801 HOH HOH . H 6 HOH A 52 652 814 HOH HOH . H 6 HOH A 53 653 849 HOH HOH . H 6 HOH A 54 654 788 HOH HOH . H 6 HOH A 55 655 729 HOH HOH . H 6 HOH A 56 656 710 HOH HOH . H 6 HOH A 57 657 844 HOH HOH . H 6 HOH A 58 658 829 HOH HOH . H 6 HOH A 59 659 859 HOH HOH . H 6 HOH A 60 660 779 HOH HOH . H 6 HOH A 61 661 771 HOH HOH . H 6 HOH A 62 662 702 HOH HOH . H 6 HOH A 63 663 724 HOH HOH . H 6 HOH A 64 664 758 HOH HOH . H 6 HOH A 65 665 817 HOH HOH . H 6 HOH A 66 666 808 HOH HOH . H 6 HOH A 67 667 722 HOH HOH . H 6 HOH A 68 668 734 HOH HOH . H 6 HOH A 69 669 777 HOH HOH . H 6 HOH A 70 670 706 HOH HOH . H 6 HOH A 71 671 857 HOH HOH . H 6 HOH A 72 672 812 HOH HOH . H 6 HOH A 73 673 781 HOH HOH . H 6 HOH A 74 674 760 HOH HOH . H 6 HOH A 75 675 804 HOH HOH . H 6 HOH A 76 676 796 HOH HOH . H 6 HOH A 77 677 718 HOH HOH . H 6 HOH A 78 678 786 HOH HOH . H 6 HOH A 79 679 838 HOH HOH . H 6 HOH A 80 680 813 HOH HOH . H 6 HOH A 81 681 855 HOH HOH . H 6 HOH A 82 682 715 HOH HOH . H 6 HOH A 83 683 833 HOH HOH . H 6 HOH A 84 684 789 HOH HOH . H 6 HOH A 85 685 763 HOH HOH . H 6 HOH A 86 686 840 HOH HOH . H 6 HOH A 87 687 870 HOH HOH . H 6 HOH A 88 688 780 HOH HOH . H 6 HOH A 89 689 791 HOH HOH . H 6 HOH A 90 690 762 HOH HOH . H 6 HOH A 91 691 830 HOH HOH . H 6 HOH A 92 692 858 HOH HOH . H 6 HOH A 93 693 871 HOH HOH . H 6 HOH A 94 694 807 HOH HOH . H 6 HOH A 95 695 819 HOH HOH . H 6 HOH A 96 696 811 HOH HOH . H 6 HOH A 97 697 806 HOH HOH . H 6 HOH A 98 698 797 HOH HOH . H 6 HOH A 99 699 873 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 3 15.162 8.826 13.044 1 26.96 ? S SO4 505 A 1 HETATM 2 O O1 SO4 . . . F 3 15.317 10.269 12.925 1 29.86 ? O1 SO4 505 A 1 HETATM 3 O O2 SO4 . . . F 3 14.469 8.318 11.86 1 25.44 ? O2 SO4 505 A 1 HETATM 4 O O3 SO4 . . . F 3 14.375 8.527 14.239 1 26.96 ? O3 SO4 505 A 1 HETATM 5 O O4 SO4 . . . F 3 16.472 8.207 13.124 1 31.41 ? O4 SO4 505 A 1 # _model_server_stats.io_time_ms 112 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 5 #