data_7BNI # _model_server_result.job_id oXBWJoyILo8c7rpLWwuKjQ _model_server_result.datetime_utc '2024-11-14 06:12:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bni # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":506}' # _entry.id 7BNI # _exptl.entry_id 7BNI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.48 _cell.angle_gamma 90 _cell.entry_id 7BNI _cell.length_a 36.719 _cell.length_b 54.911 _cell.length_c 49.181 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BNI _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,M 1 1 B,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 7BNI _atom_sites.fract_transf_matrix[1][1] 0.027234 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001179 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018211 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020352 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAL A 1 501 501 SAL SAL . D 2 SAL A 1 502 601 SAL SAL . E 2 SAL A 1 503 701 SAL SAL . F 3 GOL A 1 504 801 GOL GOL . G 3 GOL A 1 505 901 GOL GOL . H 3 GOL A 1 506 601 GOL GOL . I 4 SO4 A 1 507 1 SO4 SO4 . J 4 SO4 A 1 508 5 SO4 SO4 . K 2 SAL B 1 501 501 SAL SAL . L 4 SO4 B 1 502 2 SO4 SO4 . M 5 HOH A 1 601 215 HOH HOH . M 5 HOH A 2 602 297 HOH HOH . M 5 HOH A 3 603 212 HOH HOH . M 5 HOH A 4 604 137 HOH HOH . M 5 HOH A 5 605 223 HOH HOH . M 5 HOH A 6 606 97 HOH HOH . M 5 HOH A 7 607 120 HOH HOH . M 5 HOH A 8 608 25 HOH HOH . M 5 HOH A 9 609 49 HOH HOH . M 5 HOH A 10 610 76 HOH HOH . M 5 HOH A 11 611 241 HOH HOH . M 5 HOH A 12 612 190 HOH HOH . M 5 HOH A 13 613 85 HOH HOH . M 5 HOH A 14 614 41 HOH HOH . M 5 HOH A 15 615 18 HOH HOH . M 5 HOH A 16 616 216 HOH HOH . M 5 HOH A 17 617 2 HOH HOH . M 5 HOH A 18 618 209 HOH HOH . M 5 HOH A 19 619 128 HOH HOH . M 5 HOH A 20 620 275 HOH HOH . M 5 HOH A 21 621 63 HOH HOH . M 5 HOH A 22 622 103 HOH HOH . M 5 HOH A 23 623 108 HOH HOH . M 5 HOH A 24 624 34 HOH HOH . M 5 HOH A 25 625 21 HOH HOH . M 5 HOH A 26 626 217 HOH HOH . M 5 HOH A 27 627 187 HOH HOH . M 5 HOH A 28 628 52 HOH HOH . M 5 HOH A 29 629 23 HOH HOH . M 5 HOH A 30 630 129 HOH HOH . M 5 HOH A 31 631 112 HOH HOH . M 5 HOH A 32 632 98 HOH HOH . M 5 HOH A 33 633 195 HOH HOH . M 5 HOH A 34 634 227 HOH HOH . M 5 HOH A 35 635 6 HOH HOH . M 5 HOH A 36 636 299 HOH HOH . M 5 HOH A 37 637 83 HOH HOH . M 5 HOH A 38 638 130 HOH HOH . M 5 HOH A 39 639 116 HOH HOH . M 5 HOH A 40 640 247 HOH HOH . M 5 HOH A 41 641 249 HOH HOH . M 5 HOH A 42 642 308 HOH HOH . M 5 HOH A 43 643 64 HOH HOH . M 5 HOH A 44 644 142 HOH HOH . M 5 HOH A 45 645 95 HOH HOH . M 5 HOH A 46 646 11 HOH HOH . M 5 HOH A 47 647 36 HOH HOH . M 5 HOH A 48 648 1 HOH HOH . M 5 HOH A 49 649 7 HOH HOH . M 5 HOH A 50 650 114 HOH HOH . M 5 HOH A 51 651 286 HOH HOH . M 5 HOH A 52 652 4 HOH HOH . M 5 HOH A 53 653 144 HOH HOH . M 5 HOH A 54 654 242 HOH HOH . M 5 HOH A 55 655 45 HOH HOH . M 5 HOH A 56 656 74 HOH HOH . M 5 HOH A 57 657 93 HOH HOH . M 5 HOH A 58 658 117 HOH HOH . M 5 HOH A 59 659 244 HOH HOH . M 5 HOH A 60 660 121 HOH HOH . M 5 HOH A 61 661 72 HOH HOH . M 5 HOH A 62 662 131 HOH HOH . M 5 HOH A 63 663 40 HOH HOH . M 5 HOH A 64 664 305 HOH HOH . M 5 HOH A 65 665 30 HOH HOH . M 5 HOH A 66 666 106 HOH HOH . M 5 HOH A 67 667 180 HOH HOH . M 5 HOH A 68 668 316 HOH HOH . M 5 HOH A 69 669 260 HOH HOH . M 5 HOH A 70 670 27 HOH HOH . M 5 HOH A 71 671 53 HOH HOH . M 5 HOH A 72 672 218 HOH HOH . M 5 HOH A 73 673 86 HOH HOH . M 5 HOH A 74 674 47 HOH HOH . M 5 HOH A 75 675 70 HOH HOH . M 5 HOH A 76 676 243 HOH HOH . M 5 HOH A 77 677 295 HOH HOH . M 5 HOH A 78 678 65 HOH HOH . M 5 HOH A 79 679 69 HOH HOH . M 5 HOH A 80 680 226 HOH HOH . M 5 HOH A 81 681 43 HOH HOH . M 5 HOH A 82 682 26 HOH HOH . M 5 HOH A 83 683 107 HOH HOH . M 5 HOH A 84 684 224 HOH HOH . M 5 HOH A 85 685 211 HOH HOH . M 5 HOH A 86 686 14 HOH HOH . M 5 HOH A 87 687 199 HOH HOH . M 5 HOH A 88 688 42 HOH HOH . M 5 HOH A 89 689 181 HOH HOH . M 5 HOH A 90 690 148 HOH HOH . M 5 HOH A 91 691 75 HOH HOH . M 5 HOH A 92 692 179 HOH HOH . M 5 HOH A 93 693 256 HOH HOH . M 5 HOH A 94 694 5 HOH HOH . M 5 HOH A 95 695 307 HOH HOH . M 5 HOH A 96 696 24 HOH HOH . M 5 HOH A 97 697 230 HOH HOH . M 5 HOH A 98 698 113 HOH HOH . M 5 HOH A 99 699 145 HOH HOH . M 5 HOH A 100 700 207 HOH HOH . M 5 HOH A 101 701 185 HOH HOH . M 5 HOH A 102 702 233 HOH HOH . M 5 HOH A 103 703 17 HOH HOH . M 5 HOH A 104 704 280 HOH HOH . M 5 HOH A 105 705 288 HOH HOH . M 5 HOH A 106 706 281 HOH HOH . M 5 HOH A 107 707 312 HOH HOH . M 5 HOH A 108 708 29 HOH HOH . M 5 HOH A 109 709 91 HOH HOH . M 5 HOH A 110 710 255 HOH HOH . M 5 HOH A 111 711 201 HOH HOH . M 5 HOH A 112 712 292 HOH HOH . M 5 HOH A 113 713 229 HOH HOH . M 5 HOH A 114 714 309 HOH HOH . M 5 HOH A 115 715 306 HOH HOH . M 5 HOH A 116 716 221 HOH HOH . M 5 HOH A 117 717 298 HOH HOH . M 5 HOH A 118 718 236 HOH HOH . M 5 HOH A 119 719 248 HOH HOH . M 5 HOH A 120 720 251 HOH HOH . M 5 HOH A 121 721 109 HOH HOH . M 5 HOH A 122 722 51 HOH HOH . M 5 HOH A 123 723 149 HOH HOH . M 5 HOH A 124 724 313 HOH HOH . M 5 HOH A 125 725 28 HOH HOH . M 5 HOH A 126 726 252 HOH HOH . M 5 HOH A 127 727 269 HOH HOH . M 5 HOH A 128 728 253 HOH HOH . M 5 HOH A 129 729 110 HOH HOH . M 5 HOH A 130 730 141 HOH HOH . M 5 HOH A 131 731 71 HOH HOH . M 5 HOH A 132 732 143 HOH HOH . M 5 HOH A 133 733 167 HOH HOH . M 5 HOH A 134 734 274 HOH HOH . M 5 HOH A 135 735 198 HOH HOH . M 5 HOH A 136 736 270 HOH HOH . M 5 HOH A 137 737 246 HOH HOH . M 5 HOH A 138 738 289 HOH HOH . M 5 HOH A 139 739 272 HOH HOH . M 5 HOH A 140 740 237 HOH HOH . M 5 HOH A 141 741 271 HOH HOH . M 5 HOH A 142 742 277 HOH HOH . M 5 HOH A 143 743 225 HOH HOH . M 5 HOH A 144 744 115 HOH HOH . N 5 HOH B 1 601 170 HOH HOH . N 5 HOH B 2 602 182 HOH HOH . N 5 HOH B 3 603 203 HOH HOH . N 5 HOH B 4 604 37 HOH HOH . N 5 HOH B 5 605 119 HOH HOH . N 5 HOH B 6 606 159 HOH HOH . N 5 HOH B 7 607 104 HOH HOH . N 5 HOH B 8 608 160 HOH HOH . N 5 HOH B 9 609 220 HOH HOH . N 5 HOH B 10 610 202 HOH HOH . N 5 HOH B 11 611 153 HOH HOH . N 5 HOH B 12 612 13 HOH HOH . N 5 HOH B 13 613 161 HOH HOH . N 5 HOH B 14 614 254 HOH HOH . N 5 HOH B 15 615 94 HOH HOH . N 5 HOH B 16 616 101 HOH HOH . N 5 HOH B 17 617 78 HOH HOH . N 5 HOH B 18 618 268 HOH HOH . N 5 HOH B 19 619 19 HOH HOH . N 5 HOH B 20 620 35 HOH HOH . N 5 HOH B 21 621 189 HOH HOH . N 5 HOH B 22 622 9 HOH HOH . N 5 HOH B 23 623 39 HOH HOH . N 5 HOH B 24 624 3 HOH HOH . N 5 HOH B 25 625 10 HOH HOH . N 5 HOH B 26 626 102 HOH HOH . N 5 HOH B 27 627 58 HOH HOH . N 5 HOH B 28 628 12 HOH HOH . N 5 HOH B 29 629 61 HOH HOH . N 5 HOH B 30 630 235 HOH HOH . N 5 HOH B 31 631 264 HOH HOH . N 5 HOH B 32 632 77 HOH HOH . N 5 HOH B 33 633 282 HOH HOH . N 5 HOH B 34 634 156 HOH HOH . N 5 HOH B 35 635 154 HOH HOH . N 5 HOH B 36 636 197 HOH HOH . N 5 HOH B 37 637 31 HOH HOH . N 5 HOH B 38 638 16 HOH HOH . N 5 HOH B 39 639 133 HOH HOH . N 5 HOH B 40 640 90 HOH HOH . N 5 HOH B 41 641 89 HOH HOH . N 5 HOH B 42 642 20 HOH HOH . N 5 HOH B 43 643 239 HOH HOH . N 5 HOH B 44 644 283 HOH HOH . N 5 HOH B 45 645 168 HOH HOH . N 5 HOH B 46 646 183 HOH HOH . N 5 HOH B 47 647 132 HOH HOH . N 5 HOH B 48 648 191 HOH HOH . N 5 HOH B 49 649 84 HOH HOH . N 5 HOH B 50 650 22 HOH HOH . N 5 HOH B 51 651 62 HOH HOH . N 5 HOH B 52 652 150 HOH HOH . N 5 HOH B 53 653 261 HOH HOH . N 5 HOH B 54 654 57 HOH HOH . N 5 HOH B 55 655 192 HOH HOH . N 5 HOH B 56 656 125 HOH HOH . N 5 HOH B 57 657 136 HOH HOH . N 5 HOH B 58 658 127 HOH HOH . N 5 HOH B 59 659 265 HOH HOH . N 5 HOH B 60 660 296 HOH HOH . N 5 HOH B 61 661 222 HOH HOH . N 5 HOH B 62 662 276 HOH HOH . N 5 HOH B 63 663 205 HOH HOH . N 5 HOH B 64 664 273 HOH HOH . N 5 HOH B 65 665 310 HOH HOH . N 5 HOH B 66 666 46 HOH HOH . N 5 HOH B 67 667 96 HOH HOH . N 5 HOH B 68 668 92 HOH HOH . N 5 HOH B 69 669 134 HOH HOH . N 5 HOH B 70 670 290 HOH HOH . N 5 HOH B 71 671 291 HOH HOH . N 5 HOH B 72 672 266 HOH HOH . N 5 HOH B 73 673 38 HOH HOH . N 5 HOH B 74 674 174 HOH HOH . N 5 HOH B 75 675 54 HOH HOH . N 5 HOH B 76 676 66 HOH HOH . N 5 HOH B 77 677 122 HOH HOH . N 5 HOH B 78 678 204 HOH HOH . N 5 HOH B 79 679 171 HOH HOH . N 5 HOH B 80 680 293 HOH HOH . N 5 HOH B 81 681 178 HOH HOH . N 5 HOH B 82 682 118 HOH HOH . N 5 HOH B 83 683 177 HOH HOH . N 5 HOH B 84 684 111 HOH HOH . N 5 HOH B 85 685 60 HOH HOH . N 5 HOH B 86 686 262 HOH HOH . N 5 HOH B 87 687 184 HOH HOH . N 5 HOH B 88 688 231 HOH HOH . N 5 HOH B 89 689 314 HOH HOH . N 5 HOH B 90 690 285 HOH HOH . N 5 HOH B 91 691 139 HOH HOH . N 5 HOH B 92 692 186 HOH HOH . N 5 HOH B 93 693 245 HOH HOH . N 5 HOH B 94 694 250 HOH HOH . N 5 HOH B 95 695 214 HOH HOH . N 5 HOH B 96 696 99 HOH HOH . N 5 HOH B 97 697 175 HOH HOH . N 5 HOH B 98 698 152 HOH HOH . N 5 HOH B 99 699 155 HOH HOH . N 5 HOH B 100 700 315 HOH HOH . N 5 HOH B 101 701 32 HOH HOH . N 5 HOH B 102 702 311 HOH HOH . N 5 HOH B 103 703 210 HOH HOH . N 5 HOH B 104 704 162 HOH HOH . N 5 HOH B 105 705 278 HOH HOH . N 5 HOH B 106 706 158 HOH HOH . N 5 HOH B 107 707 105 HOH HOH . N 5 HOH B 108 708 123 HOH HOH . N 5 HOH B 109 709 213 HOH HOH . N 5 HOH B 110 710 172 HOH HOH . N 5 HOH B 111 711 232 HOH HOH . N 5 HOH B 112 712 176 HOH HOH . N 5 HOH B 113 713 238 HOH HOH . N 5 HOH B 114 714 193 HOH HOH . N 5 HOH B 115 715 173 HOH HOH . N 5 HOH B 116 716 228 HOH HOH . N 5 HOH B 117 717 294 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 3 0.269 1.395 3.469 0.6 24.09 ? C1 GOL 506 A 1 HETATM 2 O O1 GOL . . . H 3 1.169 0.849 2.527 0.6 25.83 ? O1 GOL 506 A 1 HETATM 3 C C2 GOL . . . H 3 0.179 0.434 4.625 0.6 22.94 ? C2 GOL 506 A 1 HETATM 4 O O2 GOL . . . H 3 1.402 -0.066 5.03 0.6 23.68 ? O2 GOL 506 A 1 HETATM 5 C C3 GOL . . . H 3 -0.709 -0.645 4.06 0.6 19.37 ? C3 GOL 506 A 1 HETATM 6 O O3 GOL . . . H 3 -0.799 -1.551 5.03 0.6 14.52 ? O3 GOL 506 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #