data_7BNS
#
_model_server_result.job_id            tofArSbOacwEKXUEQ3-i1A 
_model_server_result.datetime_utc      '2025-02-03 22:54:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bns 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":4000}' 
#
_entry.id    7BNS 
#
_exptl.entry_id    7BNS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              426.631 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,25-Dihydroxy-16-ene-20-cyclopropyl-vitamin D3' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7BNS 
_cell.length_a            65.874 
_cell.length_b            65.874 
_cell.length_c            263.683 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BNS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C28 H42 O3' 
_chem_comp.formula_weight    426.631 
_chem_comp.id                U5W 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              '1,25-Dihydroxy-16-ene-20-cyclopropyl-vitamin D3' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     (1R,3S,5Z)-5-[(2E)-2-[(3aS,7aS)-7a-methyl-1-[1-(4-methyl-4-oxidanyl-pentyl)cyclopropyl]-3a,5,6,7-tetrahydro-3H-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C22 C20 U5W sing 358 n n 
C20 C23 U5W sing 359 n n 
C20 C18 U5W sing 360 n n 
C20 O2 U5W sing 361 n n 
C18 C26 U5W sing 362 n n 
C26 C6 U5W sing 363 n n 
C6 C27 U5W sing 364 n n 
C21 C13 U5W sing 365 n n 
C19 C17 U5W doub 366 n n 
C11 C12 U5W sing 367 n n 
C11 C10 U5W sing 368 n n 
C4 C5 U5W sing 369 n n 
C4 C3 U5W sing 370 n n 
C12 C13 U5W sing 371 n n 
C27 C28 U5W sing 372 n n 
C27 C25 U5W sing 373 n n 
C27 C24 U5W sing 374 n n 
C2 C3 U5W sing 375 n n 
C2 C1 U5W sing 376 n n 
C13 C28 U5W sing 377 n n 
C13 C14 U5W sing 378 n n 
O1 C1 U5W sing 379 n n 
C5 C17 U5W sing 380 n n 
C5 C7 U5W doub 381 z n 
C17 C1 U5W sing 382 n n 
C28 C16 U5W doub 383 n n 
C3 O U5W sing 384 n n 
C7 C8 U5W sing 385 n n 
C10 C9 U5W sing 386 n n 
C25 C24 U5W sing 387 n n 
C8 C9 U5W doub 388 e n 
C9 C14 U5W sing 389 n n 
C16 C15 U5W sing 390 n n 
C14 C15 U5W sing 391 n n 
O HO U5W sing 392 n n 
C1 H11 U5W sing 393 n n 
O2 H4 U5W sing 394 n n 
C2 H21 U5W sing 395 n n 
C2 H22 U5W sing 396 n n 
C3 H3 U5W sing 397 n n 
C4 H41 U5W sing 398 n n 
C4 H42 U5W sing 399 n n 
C7 H7 U5W sing 400 n n 
C8 H8 U5W sing 401 n n 
C10 H101 U5W sing 402 n n 
C10 H102 U5W sing 403 n n 
C11 H111 U5W sing 404 n n 
C11 H112 U5W sing 405 n n 
C12 H121 U5W sing 406 n n 
C12 H122 U5W sing 407 n n 
C21 H181 U5W sing 408 n n 
C21 H182 U5W sing 409 n n 
C21 H183 U5W sing 410 n n 
C14 H14 U5W sing 411 n n 
C15 H151 U5W sing 412 n n 
C15 H152 U5W sing 413 n n 
C16 H161 U5W sing 414 n n 
C6 H221 U5W sing 415 n n 
C6 H222 U5W sing 416 n n 
C19 H191 U5W sing 417 n n 
C19 H192 U5W sing 418 n n 
O1 H32 U5W sing 419 n n 
C26 H231 U5W sing 420 n n 
C26 H232 U5W sing 421 n n 
C18 H241 U5W sing 422 n n 
C18 H242 U5W sing 423 n n 
C22 H261 U5W sing 424 n n 
C22 H262 U5W sing 425 n n 
C22 H263 U5W sing 426 n n 
C23 H273 U5W sing 427 n n 
C23 H271 U5W sing 428 n n 
C23 H272 U5W sing 429 n n 
C24 H211 U5W sing 430 n n 
C24 H212 U5W sing 431 n n 
C25 H45 U5W sing 432 n n 
C25 H46 U5W sing 433 n n 
#
_atom_sites.entry_id                     7BNS 
_atom_sites.fract_transf_matrix[1][1]    0.01518 
_atom_sites.fract_transf_matrix[1][2]    0.008764 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017529 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003792 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 U5W A2 1 4000 4000 U5W XXX . 
D 4 HOH A2 1 4101 22 HOH HOH . 
D 4 HOH A2 2 4102 23 HOH HOH . 
D 4 HOH A2 3 4103 10 HOH HOH . 
D 4 HOH A2 4 4104 5 HOH HOH . 
D 4 HOH A2 5 4105 15 HOH HOH . 
D 4 HOH A2 6 4106 1 HOH HOH . 
D 4 HOH A2 7 4107 14 HOH HOH . 
D 4 HOH A2 8 4108 10 HOH HOH . 
D 4 HOH A2 9 4109 21 HOH HOH . 
D 4 HOH A2 10 4110 2 HOH HOH . 
D 4 HOH A2 11 4111 29 HOH HOH . 
D 4 HOH A2 12 4112 8 HOH HOH . 
D 4 HOH A2 13 4113 11 HOH HOH . 
D 4 HOH A2 14 4114 7 HOH HOH . 
D 4 HOH A2 15 4115 3 HOH HOH . 
D 4 HOH A2 16 4116 18 HOH HOH . 
D 4 HOH A2 17 4117 16 HOH HOH . 
D 4 HOH A2 18 4118 9 HOH HOH . 
D 4 HOH A2 19 4119 2 HOH HOH . 
D 4 HOH A2 20 4120 4 HOH HOH . 
D 4 HOH A2 21 4121 30 HOH HOH . 
D 4 HOH A2 22 4122 17 HOH HOH . 
D 4 HOH A2 23 4123 32 HOH HOH . 
D 4 HOH A2 24 4124 28 HOH HOH . 
D 4 HOH A2 25 4125 27 HOH HOH . 
D 4 HOH A2 26 4126 20 HOH HOH . 
D 4 HOH A2 27 4127 12 HOH HOH . 
D 4 HOH A2 28 4128 24 HOH HOH . 
D 4 HOH A2 29 4129 1 HOH HOH . 
D 4 HOH A2 30 4130 7 HOH HOH . 
D 4 HOH A2 31 4131 26 HOH HOH . 
D 4 HOH A2 32 4132 9 HOH HOH . 
D 4 HOH A2 33 4133 5 HOH HOH . 
D 4 HOH A2 34 4134 6 HOH HOH . 
E 4 HOH B2 1 801 6 HOH HOH . 
E 4 HOH B2 2 802 33 HOH HOH . 
E 4 HOH B2 3 803 34 HOH HOH . 
E 4 HOH B2 4 804 19 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C17 U5W . . . C 3 1.676 39.616 37.974 1 46.14 ? C17 U5W 4000 A2 1 
HETATM 2 O O U5W . . . C 3 0.041 41.936 40.054 1 44.6 ? O U5W 4000 A2 1 
HETATM 3 C C1 U5W . . . C 3 2.393 40.834 38.608 1 50.18 ? C1 U5W 4000 A2 1 
HETATM 4 O O2 U5W . . . C 3 3.98 28.734 34.407 1 63.82 ? O2 U5W 4000 A2 1 
HETATM 5 C C2 U5W . . . C 3 1.614 42.113 38.192 1 44.46 ? C2 U5W 4000 A2 1 
HETATM 6 C C3 U5W . . . C 3 0.086 42.016 38.619 1 42.53 ? C3 U5W 4000 A2 1 
HETATM 7 C C4 U5W . . . C 3 -0.596 40.745 37.986 1 41.51 ? C4 U5W 4000 A2 1 
HETATM 8 C C5 U5W . . . C 3 0.159 39.45 38.299 1 45.82 ? C5 U5W 4000 A2 1 
HETATM 9 C C7 U5W . . . C 3 -0.35 38.292 38.73 1 44.88 ? C7 U5W 4000 A2 1 
HETATM 10 C C8 U5W . . . C 3 0.271 37.015 39.009 1 52.65 ? C8 U5W 4000 A2 1 
HETATM 11 C C9 U5W . . . C 3 -0.344 35.823 38.948 1 58.93 ? C9 U5W 4000 A2 1 
HETATM 12 C C10 U5W . . . C 3 -1.783 35.619 38.543 1 54.62 ? C10 U5W 4000 A2 1 
HETATM 13 C C11 U5W . . . C 3 -2.089 34.389 37.692 1 52.05 ? C11 U5W 4000 A2 1 
HETATM 14 C C12 U5W . . . C 3 -1.252 33.196 38.123 1 54.82 ? C12 U5W 4000 A2 1 
HETATM 15 C C13 U5W . . . C 3 0.238 33.548 38.115 1 61.51 ? C13 U5W 4000 A2 1 
HETATM 16 C C21 U5W . . . C 3 0.636 34.215 36.784 1 64.73 ? C21 U5W 4000 A2 1 
HETATM 17 C C14 U5W . . . C 3 0.415 34.552 39.288 1 67.08 ? C14 U5W 4000 A2 1 
HETATM 18 C C15 U5W . . . C 3 1.895 34.392 39.681 1 70.58 ? C15 U5W 4000 A2 1 
HETATM 19 C C16 U5W . . . C 3 2.154 32.962 39.327 1 67.47 ? C16 U5W 4000 A2 1 
HETATM 20 C C28 U5W . . . C 3 1.25 32.477 38.496 1 64.62 ? C28 U5W 4000 A2 1 
HETATM 21 C C27 U5W . . . C 3 1.201 31.028 38.022 1 69.98 ? C27 U5W 4000 A2 1 
HETATM 22 C C6 U5W . . . C 3 1.071 30.835 36.494 1 70.35 ? C6 U5W 4000 A2 1 
HETATM 23 C C19 U5W . . . C 3 2.325 38.755 37.147 1 54.33 ? C19 U5W 4000 A2 1 
HETATM 24 O O1 U5W . . . C 3 3.818 40.944 38.208 1 55.76 ? O1 U5W 4000 A2 1 
HETATM 25 C C26 U5W . . . C 3 2.441 30.732 35.825 1 67.12 ? C26 U5W 4000 A2 1 
HETATM 26 C C18 U5W . . . C 3 2.326 30.385 34.339 1 59.82 ? C18 U5W 4000 A2 1 
HETATM 27 C C20 U5W . . . C 3 3.609 29.865 33.675 1 54.86 ? C20 U5W 4000 A2 1 
HETATM 28 C C22 U5W . . . C 3 3.412 29.64 32.164 1 53.54 ? C22 U5W 4000 A2 1 
HETATM 29 C C23 U5W . . . C 3 4.772 30.912 33.83 1 60.94 ? C23 U5W 4000 A2 1 
HETATM 30 C C24 U5W . . . C 3 0.491 30.078 38.959 1 75.5 ? C24 U5W 4000 A2 1 
HETATM 31 C C25 U5W . . . C 3 1.975 30.008 38.825 1 73.47 ? C25 U5W 4000 A2 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#