data_7BOT
#
_model_server_result.job_id            lDeMH-TjjWmasJKgUYQKUw 
_model_server_result.datetime_utc      '2024-10-18 08:33:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7bot 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":6}' 
#
_entry.id    7BOT 
#
_exptl.entry_id    7BOT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              229.425 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-dodecylmethanethioamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7BOT 
_cell.length_a            35.83 
_cell.length_b            65.494 
_cell.length_c            114.889 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7BOT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C19 P6S 1 B P6S 1 1_555 B N LYS 2 B LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale2 B C LYS 2 B LYS 2 1_555 B N AIB 3 B AIB 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale3 B NZ LYS 2 B LYS 2 1_555 D C18 F4R . B F4R 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale4 B C AIB 3 B AIB 3 1_555 B N ARG 4 B ARG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale5 B C ARG 4 B ARG 4 1_555 B N NH2 5 B NH2 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
metalc ? metalc1 A SG CYS 144 A CYS 195 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? 
metalc ? metalc2 A SG CYS 149 A CYS 200 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc3 A SG CYS 170 A CYS 221 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc4 A SG CYS 173 A CYS 224 1_555 C ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? 
#
_chem_comp.formula           'C13 H27 N S' 
_chem_comp.formula_weight    229.425 
_chem_comp.id                F4R 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-dodecylmethanethioamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C26 C27 F4R sing 98 n n 
C26 C25 F4R sing 99 n n 
C37 C27 F4R sing 100 n n 
C37 C38 F4R sing 101 n n 
C25 C24 F4R sing 102 n n 
C24 C23 F4R sing 103 n n 
C38 C39 F4R sing 104 n n 
C22 C23 F4R sing 105 n n 
C22 C21 F4R sing 106 n n 
C21 C20 F4R sing 107 n n 
C20 C19 F4R sing 108 n n 
C19 N4 F4R sing 109 n n 
N4 C18 F4R sing 110 n n 
C18 S1 F4R doub 111 n n 
C18 H1 F4R sing 112 n n 
C19 H3 F4R sing 113 n n 
C19 H4 F4R sing 114 n n 
C20 H5 F4R sing 115 n n 
C20 H6 F4R sing 116 n n 
C21 H7 F4R sing 117 n n 
C21 H8 F4R sing 118 n n 
C22 H9 F4R sing 119 n n 
C22 H10 F4R sing 120 n n 
C23 H11 F4R sing 121 n n 
C23 H12 F4R sing 122 n n 
C24 H13 F4R sing 123 n n 
C24 H14 F4R sing 124 n n 
C25 H15 F4R sing 125 n n 
C25 H16 F4R sing 126 n n 
C26 H17 F4R sing 127 n n 
C26 H18 F4R sing 128 n n 
C27 H19 F4R sing 129 n n 
C27 H20 F4R sing 130 n n 
C37 H21 F4R sing 131 n n 
C37 H22 F4R sing 132 n n 
C38 H23 F4R sing 133 n n 
C38 H24 F4R sing 134 n n 
C39 H25 F4R sing 135 n n 
C39 H26 F4R sing 136 n n 
C39 H27 F4R sing 137 n n 
N4 H2 F4R sing 138 n n 
#
_atom_sites.entry_id                     7BOT 
_atom_sites.fract_transf_matrix[1][1]    0.02791 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015269 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008704 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ZN A 1 501 501 ZN ZN . 
D 4 F4R B 1 6 601 F4R ONB . 
E 5 HOH A 1 601 13 HOH HOH . 
E 5 HOH A 2 602 56 HOH HOH . 
E 5 HOH A 3 603 97 HOH HOH . 
E 5 HOH A 4 604 107 HOH HOH . 
E 5 HOH A 5 605 2 HOH HOH . 
E 5 HOH A 6 606 8 HOH HOH . 
E 5 HOH A 7 607 68 HOH HOH . 
E 5 HOH A 8 608 96 HOH HOH . 
E 5 HOH A 9 609 101 HOH HOH . 
E 5 HOH A 10 610 20 HOH HOH . 
E 5 HOH A 11 611 27 HOH HOH . 
E 5 HOH A 12 612 70 HOH HOH . 
E 5 HOH A 13 613 22 HOH HOH . 
E 5 HOH A 14 614 85 HOH HOH . 
E 5 HOH A 15 615 65 HOH HOH . 
E 5 HOH A 16 616 3 HOH HOH . 
E 5 HOH A 17 617 102 HOH HOH . 
E 5 HOH A 18 618 30 HOH HOH . 
E 5 HOH A 19 619 74 HOH HOH . 
E 5 HOH A 20 620 36 HOH HOH . 
E 5 HOH A 21 621 41 HOH HOH . 
E 5 HOH A 22 622 25 HOH HOH . 
E 5 HOH A 23 623 104 HOH HOH . 
E 5 HOH A 24 624 51 HOH HOH . 
E 5 HOH A 25 625 88 HOH HOH . 
E 5 HOH A 26 626 19 HOH HOH . 
E 5 HOH A 27 627 80 HOH HOH . 
E 5 HOH A 28 628 66 HOH HOH . 
E 5 HOH A 29 629 84 HOH HOH . 
E 5 HOH A 30 630 83 HOH HOH . 
E 5 HOH A 31 631 86 HOH HOH . 
E 5 HOH A 32 632 28 HOH HOH . 
E 5 HOH A 33 633 43 HOH HOH . 
E 5 HOH A 34 634 59 HOH HOH . 
E 5 HOH A 35 635 31 HOH HOH . 
E 5 HOH A 36 636 35 HOH HOH . 
E 5 HOH A 37 637 47 HOH HOH . 
E 5 HOH A 38 638 95 HOH HOH . 
E 5 HOH A 39 639 54 HOH HOH . 
E 5 HOH A 40 640 40 HOH HOH . 
E 5 HOH A 41 641 108 HOH HOH . 
E 5 HOH A 42 642 15 HOH HOH . 
E 5 HOH A 43 643 81 HOH HOH . 
E 5 HOH A 44 644 18 HOH HOH . 
E 5 HOH A 45 645 82 HOH HOH . 
E 5 HOH A 46 646 45 HOH HOH . 
E 5 HOH A 47 647 64 HOH HOH . 
E 5 HOH A 48 648 1 HOH HOH . 
E 5 HOH A 49 649 73 HOH HOH . 
E 5 HOH A 50 650 11 HOH HOH . 
E 5 HOH A 51 651 62 HOH HOH . 
E 5 HOH A 52 652 6 HOH HOH . 
E 5 HOH A 53 653 105 HOH HOH . 
E 5 HOH A 54 654 93 HOH HOH . 
E 5 HOH A 55 655 53 HOH HOH . 
E 5 HOH A 56 656 67 HOH HOH . 
E 5 HOH A 57 657 32 HOH HOH . 
E 5 HOH A 58 658 52 HOH HOH . 
E 5 HOH A 59 659 26 HOH HOH . 
E 5 HOH A 60 660 94 HOH HOH . 
E 5 HOH A 61 661 110 HOH HOH . 
E 5 HOH A 62 662 14 HOH HOH . 
E 5 HOH A 63 663 61 HOH HOH . 
E 5 HOH A 64 664 24 HOH HOH . 
E 5 HOH A 65 665 77 HOH HOH . 
E 5 HOH A 66 666 23 HOH HOH . 
E 5 HOH A 67 667 5 HOH HOH . 
E 5 HOH A 68 668 7 HOH HOH . 
E 5 HOH A 69 669 17 HOH HOH . 
E 5 HOH A 70 670 21 HOH HOH . 
E 5 HOH A 71 671 33 HOH HOH . 
E 5 HOH A 72 672 16 HOH HOH . 
E 5 HOH A 73 673 60 HOH HOH . 
E 5 HOH A 74 674 10 HOH HOH . 
E 5 HOH A 75 675 76 HOH HOH . 
E 5 HOH A 76 676 12 HOH HOH . 
E 5 HOH A 77 677 49 HOH HOH . 
E 5 HOH A 78 678 109 HOH HOH . 
E 5 HOH A 79 679 9 HOH HOH . 
E 5 HOH A 80 680 42 HOH HOH . 
E 5 HOH A 81 681 79 HOH HOH . 
E 5 HOH A 82 682 39 HOH HOH . 
E 5 HOH A 83 683 4 HOH HOH . 
E 5 HOH A 84 684 57 HOH HOH . 
E 5 HOH A 85 685 112 HOH HOH . 
E 5 HOH A 86 686 100 HOH HOH . 
E 5 HOH A 87 687 55 HOH HOH . 
E 5 HOH A 88 688 63 HOH HOH . 
E 5 HOH A 89 689 91 HOH HOH . 
E 5 HOH A 90 690 78 HOH HOH . 
E 5 HOH A 91 691 111 HOH HOH . 
E 5 HOH A 92 692 106 HOH HOH . 
E 5 HOH A 93 693 34 HOH HOH . 
E 5 HOH A 94 694 58 HOH HOH . 
E 5 HOH A 95 695 48 HOH HOH . 
E 5 HOH A 96 696 92 HOH HOH . 
E 5 HOH A 97 697 75 HOH HOH . 
E 5 HOH A 98 698 38 HOH HOH . 
E 5 HOH A 99 699 103 HOH HOH . 
E 5 HOH A 100 700 89 HOH HOH . 
E 5 HOH A 101 701 44 HOH HOH . 
E 5 HOH A 102 702 46 HOH HOH . 
E 5 HOH A 103 703 87 HOH HOH . 
E 5 HOH A 104 704 90 HOH HOH . 
E 5 HOH A 105 705 71 HOH HOH . 
F 5 HOH B 1 201 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 F4R . . . D 4 -21.092 -9.907 34.669 1 63.26 ? C18 F4R 6 B 1 
HETATM 2 S S1 F4R . . . D 4 -22.176 -10.407 33.651 1 66.99 ? S1 F4R 6 B 1 
HETATM 3 N N4 F4R . . . D 4 -20.053 -10.712 34.866 1 61.35 ? N4 F4R 6 B 1 
HETATM 4 C C19 F4R . . . D 4 -18.811 -10.264 35.445 1 64.13 ? C19 F4R 6 B 1 
HETATM 5 C C20 F4R . . . D 4 -18.442 -11.171 36.606 1 68.95 ? C20 F4R 6 B 1 
HETATM 6 C C21 F4R . . . D 4 -18.767 -10.477 37.923 1 72.77 ? C21 F4R 6 B 1 
HETATM 7 C C22 F4R . . . D 4 -20.179 -10.726 38.426 1 69.23 ? C22 F4R 6 B 1 
HETATM 8 C C23 F4R . . . D 4 -20.464 -12.187 38.763 1 76.54 ? C23 F4R 6 B 1 
HETATM 9 C C24 F4R . . . D 4 -19.532 -12.789 39.812 1 79.23 ? C24 F4R 6 B 1 
HETATM 10 C C25 F4R . . . D 4 -19.273 -14.257 39.473 1 80.41 ? C25 F4R 6 B 1 
HETATM 11 C C26 F4R . . . D 4 -18.99 -15.104 40.712 1 77.23 ? C26 F4R 6 B 1 
HETATM 12 C C27 F4R . . . D 4 -17.545 -15.603 40.714 1 77.33 ? C27 F4R 6 B 1 
HETATM 13 C C37 F4R . . . D 4 -17.444 -17.127 40.611 1 76.03 ? C37 F4R 6 B 1 
HETATM 14 C C38 F4R . . . D 4 -16.007 -17.597 40.832 1 77.26 ? C38 F4R 6 B 1 
HETATM 15 C C39 F4R . . . D 4 -15.422 -18.322 39.634 1 73.18 ? C39 F4R 6 B 1 
#
_model_server_stats.io_time_ms              143 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           15 
#