data_7BPI # _model_server_result.job_id AoNePU3WhiThI77YB9EwJw _model_server_result.datetime_utc '2025-04-06 01:52:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bpi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":802}' # _entry.id 7BPI # _exptl.entry_id 7BPI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BPI _cell.length_a 49.941 _cell.length_b 81.683 _cell.length_c 162.493 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BPI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 81 A HIS 529 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc2 A NE2 HIS 115 A HIS 563 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc3 A OD2 ASP 116 A ASP 564 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc4 A OD1 ASP 116 A ASP 564 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc5 A OD1 ASP 226 A ASP 674 1_555 C ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc6 C ZN ZN . A ZN 801 1_555 H O HOH . A HOH 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc7 D MG MG . A MG 802 1_555 H O HOH . A HOH 918 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? metalc ? metalc8 D MG MG . A MG 802 1_555 H O HOH . A HOH 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc9 B NE2 HIS 81 B HIS 529 1_555 F ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc10 B NE2 HIS 115 B HIS 563 1_555 F ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc11 B OD2 ASP 116 B ASP 564 1_555 F ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc12 B OD1 ASP 116 B ASP 564 1_555 G MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc13 B OE2 GLU 144 B GLU 592 1_555 G MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? metalc ? metalc14 B OD2 ASP 226 B ASP 674 1_555 F ZN ZN . B ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.85 ? metalc ? metalc15 G MG MG . B MG 802 1_555 I O HOH . B HOH 916 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7BPI _atom_sites.fract_transf_matrix[1][1] 0.020024 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006154 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 801 1 ZN ZN . D 3 MG A 1 802 1 MG MG . E 4 DZU A 1 803 1 DZU LGY . F 2 ZN B 1 801 2 ZN ZN . G 3 MG B 1 802 2 MG MG . H 5 HOH A 1 901 19 HOH HOH . H 5 HOH A 2 902 50 HOH HOH . H 5 HOH A 3 903 18 HOH HOH . H 5 HOH A 4 904 17 HOH HOH . H 5 HOH A 5 905 54 HOH HOH . H 5 HOH A 6 906 108 HOH HOH . H 5 HOH A 7 907 35 HOH HOH . H 5 HOH A 8 908 99 HOH HOH . H 5 HOH A 9 909 48 HOH HOH . H 5 HOH A 10 910 42 HOH HOH . H 5 HOH A 11 911 44 HOH HOH . H 5 HOH A 12 912 118 HOH HOH . H 5 HOH A 13 913 24 HOH HOH . H 5 HOH A 14 914 102 HOH HOH . H 5 HOH A 15 915 47 HOH HOH . H 5 HOH A 16 916 2 HOH HOH . H 5 HOH A 17 917 16 HOH HOH . H 5 HOH A 18 918 9 HOH HOH . H 5 HOH A 19 919 61 HOH HOH . H 5 HOH A 20 920 7 HOH HOH . H 5 HOH A 21 921 115 HOH HOH . H 5 HOH A 22 922 100 HOH HOH . H 5 HOH A 23 923 74 HOH HOH . H 5 HOH A 24 924 113 HOH HOH . H 5 HOH A 25 925 87 HOH HOH . H 5 HOH A 26 926 12 HOH HOH . H 5 HOH A 27 927 68 HOH HOH . H 5 HOH A 28 928 21 HOH HOH . H 5 HOH A 29 929 28 HOH HOH . H 5 HOH A 30 930 1 HOH HOH . H 5 HOH A 31 931 25 HOH HOH . H 5 HOH A 32 932 96 HOH HOH . H 5 HOH A 33 933 11 HOH HOH . H 5 HOH A 34 934 56 HOH HOH . H 5 HOH A 35 935 3 HOH HOH . H 5 HOH A 36 936 101 HOH HOH . H 5 HOH A 37 937 32 HOH HOH . H 5 HOH A 38 938 114 HOH HOH . H 5 HOH A 39 939 45 HOH HOH . H 5 HOH A 40 940 60 HOH HOH . H 5 HOH A 41 941 57 HOH HOH . H 5 HOH A 42 942 59 HOH HOH . H 5 HOH A 43 943 70 HOH HOH . H 5 HOH A 44 944 43 HOH HOH . H 5 HOH A 45 945 38 HOH HOH . H 5 HOH A 46 946 10 HOH HOH . H 5 HOH A 47 947 66 HOH HOH . H 5 HOH A 48 948 13 HOH HOH . H 5 HOH A 49 949 92 HOH HOH . H 5 HOH A 50 950 93 HOH HOH . H 5 HOH A 51 951 97 HOH HOH . H 5 HOH A 52 952 91 HOH HOH . H 5 HOH A 53 953 29 HOH HOH . H 5 HOH A 54 954 64 HOH HOH . H 5 HOH A 55 955 73 HOH HOH . H 5 HOH A 56 956 109 HOH HOH . H 5 HOH A 57 957 67 HOH HOH . H 5 HOH A 58 958 46 HOH HOH . H 5 HOH A 59 959 78 HOH HOH . H 5 HOH A 60 960 76 HOH HOH . H 5 HOH A 61 961 65 HOH HOH . H 5 HOH A 62 962 103 HOH HOH . H 5 HOH A 63 963 88 HOH HOH . H 5 HOH A 64 964 72 HOH HOH . H 5 HOH A 65 965 81 HOH HOH . H 5 HOH A 66 966 86 HOH HOH . H 5 HOH A 67 967 83 HOH HOH . I 5 HOH B 1 901 69 HOH HOH . I 5 HOH B 2 902 112 HOH HOH . I 5 HOH B 3 903 52 HOH HOH . I 5 HOH B 4 904 33 HOH HOH . I 5 HOH B 5 905 104 HOH HOH . I 5 HOH B 6 906 89 HOH HOH . I 5 HOH B 7 907 4 HOH HOH . I 5 HOH B 8 908 20 HOH HOH . I 5 HOH B 9 909 85 HOH HOH . I 5 HOH B 10 910 106 HOH HOH . I 5 HOH B 11 911 110 HOH HOH . I 5 HOH B 12 912 95 HOH HOH . I 5 HOH B 13 913 31 HOH HOH . I 5 HOH B 14 914 51 HOH HOH . I 5 HOH B 15 915 84 HOH HOH . I 5 HOH B 16 916 36 HOH HOH . I 5 HOH B 17 917 62 HOH HOH . I 5 HOH B 18 918 75 HOH HOH . I 5 HOH B 19 919 41 HOH HOH . I 5 HOH B 20 920 6 HOH HOH . I 5 HOH B 21 921 49 HOH HOH . I 5 HOH B 22 922 80 HOH HOH . I 5 HOH B 23 923 34 HOH HOH . I 5 HOH B 24 924 105 HOH HOH . I 5 HOH B 25 925 39 HOH HOH . I 5 HOH B 26 926 8 HOH HOH . I 5 HOH B 27 927 5 HOH HOH . I 5 HOH B 28 928 27 HOH HOH . I 5 HOH B 29 929 37 HOH HOH . I 5 HOH B 30 930 63 HOH HOH . I 5 HOH B 31 931 116 HOH HOH . I 5 HOH B 32 932 26 HOH HOH . I 5 HOH B 33 933 15 HOH HOH . I 5 HOH B 34 934 14 HOH HOH . I 5 HOH B 35 935 111 HOH HOH . I 5 HOH B 36 936 117 HOH HOH . I 5 HOH B 37 937 40 HOH HOH . I 5 HOH B 38 938 22 HOH HOH . I 5 HOH B 39 939 23 HOH HOH . I 5 HOH B 40 940 30 HOH HOH . I 5 HOH B 41 941 55 HOH HOH . I 5 HOH B 42 942 90 HOH HOH . I 5 HOH B 43 943 107 HOH HOH . I 5 HOH B 44 944 77 HOH HOH . I 5 HOH B 45 945 58 HOH HOH . I 5 HOH B 46 946 71 HOH HOH . I 5 HOH B 47 947 79 HOH HOH . I 5 HOH B 48 948 53 HOH HOH . I 5 HOH B 49 949 82 HOH HOH . I 5 HOH B 50 950 94 HOH HOH . I 5 HOH B 51 951 98 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.004 _atom_site.Cartn_y 35.83 _atom_site.Cartn_z -32.026 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 802 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #