data_7BQ4 # _model_server_result.job_id ZV6OUFx3qswJaE4oKTXQ-Q _model_server_result.datetime_utc '2024-10-30 22:11:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bq4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 7BQ4 # _exptl.entry_id 7BQ4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.76 _cell.angle_gamma 90 _cell.entry_id 7BQ4 _cell.length_a 44.969 _cell.length_b 61.482 _cell.length_c 53.116 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BQ4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 180 n n C1 C2 GOL sing 181 n n C1 H11 GOL sing 182 n n C1 H12 GOL sing 183 n n O1 HO1 GOL sing 184 n n C2 O2 GOL sing 185 n n C2 C3 GOL sing 186 n n C2 H2 GOL sing 187 n n O2 HO2 GOL sing 188 n n C3 O3 GOL sing 189 n n C3 H31 GOL sing 190 n n C3 H32 GOL sing 191 n n O3 HO3 GOL sing 192 n n # _atom_sites.entry_id 7BQ4 _atom_sites.fract_transf_matrix[1][1] 0.022238 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006697 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016265 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019662 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EPA A 1 501 1 EPA EPA . D 4 GOL A 1 502 1 GOL GOL . E 5 HOH A 1 601 90 HOH HOH . E 5 HOH A 2 602 107 HOH HOH . E 5 HOH A 3 603 111 HOH HOH . E 5 HOH A 4 604 26 HOH HOH . E 5 HOH A 5 605 13 HOH HOH . E 5 HOH A 6 606 33 HOH HOH . E 5 HOH A 7 607 99 HOH HOH . E 5 HOH A 8 608 113 HOH HOH . E 5 HOH A 9 609 36 HOH HOH . E 5 HOH A 10 610 2 HOH HOH . E 5 HOH A 11 611 95 HOH HOH . E 5 HOH A 12 612 14 HOH HOH . E 5 HOH A 13 613 62 HOH HOH . E 5 HOH A 14 614 43 HOH HOH . E 5 HOH A 15 615 58 HOH HOH . E 5 HOH A 16 616 41 HOH HOH . E 5 HOH A 17 617 29 HOH HOH . E 5 HOH A 18 618 21 HOH HOH . E 5 HOH A 19 619 55 HOH HOH . E 5 HOH A 20 620 101 HOH HOH . E 5 HOH A 21 621 23 HOH HOH . E 5 HOH A 22 622 66 HOH HOH . E 5 HOH A 23 623 19 HOH HOH . E 5 HOH A 24 624 3 HOH HOH . E 5 HOH A 25 625 9 HOH HOH . E 5 HOH A 26 626 32 HOH HOH . E 5 HOH A 27 627 7 HOH HOH . E 5 HOH A 28 628 110 HOH HOH . E 5 HOH A 29 629 11 HOH HOH . E 5 HOH A 30 630 105 HOH HOH . E 5 HOH A 31 631 46 HOH HOH . E 5 HOH A 32 632 69 HOH HOH . E 5 HOH A 33 633 98 HOH HOH . E 5 HOH A 34 634 12 HOH HOH . E 5 HOH A 35 635 8 HOH HOH . E 5 HOH A 36 636 78 HOH HOH . E 5 HOH A 37 637 112 HOH HOH . E 5 HOH A 38 638 37 HOH HOH . E 5 HOH A 39 639 24 HOH HOH . E 5 HOH A 40 640 97 HOH HOH . E 5 HOH A 41 641 25 HOH HOH . E 5 HOH A 42 642 28 HOH HOH . E 5 HOH A 43 643 51 HOH HOH . E 5 HOH A 44 644 72 HOH HOH . E 5 HOH A 45 645 117 HOH HOH . E 5 HOH A 46 646 76 HOH HOH . E 5 HOH A 47 647 71 HOH HOH . E 5 HOH A 48 648 88 HOH HOH . E 5 HOH A 49 649 16 HOH HOH . E 5 HOH A 50 650 106 HOH HOH . E 5 HOH A 51 651 6 HOH HOH . E 5 HOH A 52 652 61 HOH HOH . E 5 HOH A 53 653 50 HOH HOH . E 5 HOH A 54 654 18 HOH HOH . E 5 HOH A 55 655 120 HOH HOH . E 5 HOH A 56 656 91 HOH HOH . E 5 HOH A 57 657 4 HOH HOH . E 5 HOH A 58 658 5 HOH HOH . E 5 HOH A 59 659 82 HOH HOH . E 5 HOH A 60 660 48 HOH HOH . E 5 HOH A 61 661 109 HOH HOH . E 5 HOH A 62 662 121 HOH HOH . E 5 HOH A 63 663 104 HOH HOH . E 5 HOH A 64 664 80 HOH HOH . E 5 HOH A 65 665 20 HOH HOH . E 5 HOH A 66 666 83 HOH HOH . E 5 HOH A 67 667 39 HOH HOH . E 5 HOH A 68 668 116 HOH HOH . E 5 HOH A 69 669 38 HOH HOH . E 5 HOH A 70 670 74 HOH HOH . E 5 HOH A 71 671 47 HOH HOH . E 5 HOH A 72 672 56 HOH HOH . E 5 HOH A 73 673 59 HOH HOH . E 5 HOH A 74 674 57 HOH HOH . E 5 HOH A 75 675 94 HOH HOH . E 5 HOH A 76 676 103 HOH HOH . E 5 HOH A 77 677 67 HOH HOH . E 5 HOH A 78 678 30 HOH HOH . E 5 HOH A 79 679 22 HOH HOH . E 5 HOH A 80 680 81 HOH HOH . E 5 HOH A 81 681 77 HOH HOH . E 5 HOH A 82 682 35 HOH HOH . E 5 HOH A 83 683 115 HOH HOH . E 5 HOH A 84 684 108 HOH HOH . E 5 HOH A 85 685 15 HOH HOH . E 5 HOH A 86 686 118 HOH HOH . E 5 HOH A 87 687 10 HOH HOH . E 5 HOH A 88 688 84 HOH HOH . E 5 HOH A 89 689 44 HOH HOH . E 5 HOH A 90 690 92 HOH HOH . E 5 HOH A 91 691 93 HOH HOH . E 5 HOH A 92 692 100 HOH HOH . E 5 HOH A 93 693 17 HOH HOH . E 5 HOH A 94 694 89 HOH HOH . E 5 HOH A 95 695 45 HOH HOH . E 5 HOH A 96 696 102 HOH HOH . E 5 HOH A 97 697 73 HOH HOH . E 5 HOH A 98 698 119 HOH HOH . E 5 HOH A 99 699 85 HOH HOH . E 5 HOH A 100 700 49 HOH HOH . E 5 HOH A 101 701 86 HOH HOH . E 5 HOH A 102 702 79 HOH HOH . E 5 HOH A 103 703 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 20.765 -2.912 31.973 1 28.92 ? C1 GOL 502 A 1 HETATM 2 O O1 GOL . . . D 4 22.049 -3.199 32.447 1 35.84 ? O1 GOL 502 A 1 HETATM 3 C C2 GOL . . . D 4 20.433 -1.47 32.381 1 31.15 ? C2 GOL 502 A 1 HETATM 4 O O2 GOL . . . D 4 20.07 -0.718 31.26 1 29.31 ? O2 GOL 502 A 1 HETATM 5 C C3 GOL . . . D 4 19.304 -1.423 33.4 1 23.91 ? C3 GOL 502 A 1 HETATM 6 O O3 GOL . . . D 4 19.422 -2.486 34.318 1 29.18 ? O3 GOL 502 A 1 HETATM 7 H H11 GOL . . . D 4 20.745 -2.994 31.006 1 34.7 ? H11 GOL 502 A 1 HETATM 8 H H12 GOL . . . D 4 20.123 -3.523 32.368 1 34.7 ? H12 GOL 502 A 1 HETATM 9 H HO1 GOL . . . D 4 22.519 -2.491 32.437 1 43 ? HO1 GOL 502 A 1 HETATM 10 H H2 GOL . . . D 4 21.224 -1.072 32.778 1 37.38 ? H2 GOL 502 A 1 HETATM 11 H HO2 GOL . . . D 4 20.177 0.108 31.426 1 35.17 ? HO2 GOL 502 A 1 HETATM 12 H H31 GOL . . . D 4 18.454 -1.491 32.939 1 28.69 ? H31 GOL 502 A 1 HETATM 13 H H32 GOL . . . D 4 19.342 -0.581 33.88 1 28.69 ? H32 GOL 502 A 1 HETATM 14 H HO3 GOL . . . D 4 19.284 -2.197 35.105 1 35.02 ? HO3 GOL 502 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #