data_7BSK # _model_server_result.job_id 3jx03cno3F-pMjIoTIiGYA _model_server_result.datetime_utc '2024-11-15 00:21:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bsk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 7BSK # _exptl.entry_id 7BSK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BSK _cell.length_a 117.848 _cell.length_b 191.411 _cell.length_c 58.909 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BSK _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1 0 0 0 -1 0 0 0 1 117.848 382.822 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 7BSK _atom_sites.fract_transf_matrix[1][1] 0.008486 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005224 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016975 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 601 601 NAD NAD . D 2 NAD A 1 602 701 NAD NAD . E 2 NAD B 1 601 601 NAD NAD . F 2 NAD B 1 602 701 NAD NAD . G 3 HOH A 1 701 51 HOH HOH . G 3 HOH A 2 702 31 HOH HOH . G 3 HOH A 3 703 46 HOH HOH . G 3 HOH A 4 704 48 HOH HOH . G 3 HOH A 5 705 64 HOH HOH . G 3 HOH A 6 706 5 HOH HOH . G 3 HOH A 7 707 69 HOH HOH . G 3 HOH A 8 708 86 HOH HOH . G 3 HOH A 9 709 35 HOH HOH . G 3 HOH A 10 710 55 HOH HOH . G 3 HOH A 11 711 61 HOH HOH . G 3 HOH A 12 712 2 HOH HOH . G 3 HOH A 13 713 3 HOH HOH . G 3 HOH A 14 714 54 HOH HOH . G 3 HOH A 15 715 27 HOH HOH . G 3 HOH A 16 716 75 HOH HOH . G 3 HOH A 17 717 32 HOH HOH . G 3 HOH A 18 718 57 HOH HOH . G 3 HOH A 19 719 83 HOH HOH . G 3 HOH A 20 720 18 HOH HOH . G 3 HOH A 21 721 74 HOH HOH . G 3 HOH A 22 722 68 HOH HOH . G 3 HOH A 23 723 14 HOH HOH . G 3 HOH A 24 724 81 HOH HOH . G 3 HOH A 25 725 79 HOH HOH . G 3 HOH A 26 726 19 HOH HOH . G 3 HOH A 27 727 66 HOH HOH . G 3 HOH A 28 728 7 HOH HOH . G 3 HOH A 29 729 78 HOH HOH . G 3 HOH A 30 730 52 HOH HOH . G 3 HOH A 31 731 89 HOH HOH . G 3 HOH A 32 732 82 HOH HOH . G 3 HOH A 33 733 28 HOH HOH . G 3 HOH A 34 734 15 HOH HOH . G 3 HOH A 35 735 6 HOH HOH . G 3 HOH A 36 736 72 HOH HOH . G 3 HOH A 37 737 1 HOH HOH . G 3 HOH A 38 738 92 HOH HOH . G 3 HOH A 39 739 37 HOH HOH . G 3 HOH A 40 740 62 HOH HOH . G 3 HOH A 41 741 47 HOH HOH . H 3 HOH B 1 701 20 HOH HOH . H 3 HOH B 2 702 44 HOH HOH . H 3 HOH B 3 703 39 HOH HOH . H 3 HOH B 4 704 40 HOH HOH . H 3 HOH B 5 705 13 HOH HOH . H 3 HOH B 6 706 22 HOH HOH . H 3 HOH B 7 707 21 HOH HOH . H 3 HOH B 8 708 34 HOH HOH . H 3 HOH B 9 709 26 HOH HOH . H 3 HOH B 10 710 17 HOH HOH . H 3 HOH B 11 711 10 HOH HOH . H 3 HOH B 12 712 53 HOH HOH . H 3 HOH B 13 713 36 HOH HOH . H 3 HOH B 14 714 11 HOH HOH . H 3 HOH B 15 715 8 HOH HOH . H 3 HOH B 16 716 43 HOH HOH . H 3 HOH B 17 717 65 HOH HOH . H 3 HOH B 18 718 84 HOH HOH . H 3 HOH B 19 719 50 HOH HOH . H 3 HOH B 20 720 59 HOH HOH . H 3 HOH B 21 721 88 HOH HOH . H 3 HOH B 22 722 60 HOH HOH . H 3 HOH B 23 724 4 HOH HOH . H 3 HOH B 24 725 91 HOH HOH . H 3 HOH B 25 726 56 HOH HOH . H 3 HOH B 26 727 23 HOH HOH . H 3 HOH B 27 728 12 HOH HOH . H 3 HOH B 28 729 42 HOH HOH . H 3 HOH B 29 730 29 HOH HOH . H 3 HOH B 30 731 9 HOH HOH . H 3 HOH B 31 732 80 HOH HOH . H 3 HOH B 32 733 76 HOH HOH . H 3 HOH B 33 734 93 HOH HOH . H 3 HOH B 34 735 24 HOH HOH . H 3 HOH B 35 736 16 HOH HOH . H 3 HOH B 36 737 87 HOH HOH . H 3 HOH B 37 738 67 HOH HOH . H 3 HOH B 38 739 70 HOH HOH . H 3 HOH B 39 740 38 HOH HOH . H 3 HOH B 40 741 30 HOH HOH . H 3 HOH B 41 742 25 HOH HOH . H 3 HOH B 42 743 41 HOH HOH . H 3 HOH B 43 744 63 HOH HOH . H 3 HOH B 44 745 85 HOH HOH . H 3 HOH B 45 746 94 HOH HOH . H 3 HOH B 46 747 73 HOH HOH . H 3 HOH B 47 748 33 HOH HOH . H 3 HOH B 48 749 49 HOH HOH . H 3 HOH B 49 750 77 HOH HOH . H 3 HOH B 50 751 71 HOH HOH . H 3 HOH B 51 752 90 HOH HOH . H 3 HOH B 52 753 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . D 2 31.441 198.405 22.829 1 51.02 ? PA NAD 602 A 1 HETATM 2 O O1A NAD . . . D 2 30.17 198.987 23.384 1 52.11 ? O1A NAD 602 A 1 HETATM 3 O O2A NAD . . . D 2 32.751 198.685 23.513 1 52.31 ? O2A NAD 602 A 1 HETATM 4 O O5B NAD . . . D 2 31.57 198.836 21.298 1 48.39 ? O5B NAD 602 A 1 HETATM 5 C C5B NAD . . . D 2 30.875 199.938 20.723 1 44.25 ? C5B NAD 602 A 1 HETATM 6 C C4B NAD . . . D 2 31.414 200.168 19.318 1 40.55 ? C4B NAD 602 A 1 HETATM 7 O O4B NAD . . . D 2 32.193 201.362 19.297 1 38.27 ? O4B NAD 602 A 1 HETATM 8 C C3B NAD . . . D 2 32.376 199.089 18.864 1 38.49 ? C3B NAD 602 A 1 HETATM 9 O O3B NAD . . . D 2 32.405 199.042 17.437 1 38.58 ? O3B NAD 602 A 1 HETATM 10 C C2B NAD . . . D 2 33.721 199.545 19.384 1 36.87 ? C2B NAD 602 A 1 HETATM 11 O O2B NAD . . . D 2 34.746 198.978 18.575 1 36.09 ? O2B NAD 602 A 1 HETATM 12 C C1B NAD . . . D 2 33.598 201.056 19.257 1 35.77 ? C1B NAD 602 A 1 HETATM 13 N N9A NAD . . . D 2 34.134 201.933 20.312 1 32.67 ? N9A NAD 602 A 1 HETATM 14 C C8A NAD . . . D 2 33.895 201.872 21.628 1 33.04 ? C8A NAD 602 A 1 HETATM 15 N N7A NAD . . . D 2 34.522 202.891 22.275 1 32.08 ? N7A NAD 602 A 1 HETATM 16 C C5A NAD . . . D 2 35.141 203.62 21.348 1 30.92 ? C5A NAD 602 A 1 HETATM 17 C C6A NAD . . . D 2 35.96 204.832 21.336 1 31.16 ? C6A NAD 602 A 1 HETATM 18 N N6A NAD . . . D 2 36.248 205.461 22.491 1 32.33 ? N6A NAD 602 A 1 HETATM 19 N N1A NAD . . . D 2 36.416 205.279 20.145 1 31.21 ? N1A NAD 602 A 1 HETATM 20 C C2A NAD . . . D 2 36.143 204.646 18.985 1 31.09 ? C2A NAD 602 A 1 HETATM 21 N N3A NAD . . . D 2 35.391 203.537 18.929 1 30.9 ? N3A NAD 602 A 1 HETATM 22 C C4A NAD . . . D 2 34.874 202.996 20.056 1 31.22 ? C4A NAD 602 A 1 HETATM 23 O O3 NAD . . . D 2 31.227 196.821 22.658 1 63.63 ? O3 NAD 602 A 1 HETATM 24 P PN NAD . . . D 2 32.394 195.799 22.201 1 76.99 ? PN NAD 602 A 1 HETATM 25 O O1N NAD . . . D 2 33.744 196.487 22.148 1 70.71 ? O1N NAD 602 A 1 HETATM 26 O O2N NAD . . . D 2 31.893 195.063 20.975 1 73.31 ? O2N NAD 602 A 1 HETATM 27 O O5D NAD . . . D 2 32.4 194.757 23.447 1 89.31 ? O5D NAD 602 A 1 HETATM 28 C C5D NAD . . . D 2 32.146 195.128 24.813 1 100.04 ? C5D NAD 602 A 1 HETATM 29 C C4D NAD . . . D 2 33.455 195.553 25.483 1 108.98 ? C4D NAD 602 A 1 HETATM 30 O O4D NAD . . . D 2 33.482 196.943 25.848 1 113.74 ? O4D NAD 602 A 1 HETATM 31 C C3D NAD . . . D 2 33.757 194.827 26.788 1 112.24 ? C3D NAD 602 A 1 HETATM 32 O O3D NAD . . . D 2 34.333 193.534 26.567 1 111.55 ? O3D NAD 602 A 1 HETATM 33 C C2D NAD . . . D 2 34.702 195.78 27.51 1 113.98 ? C2D NAD 602 A 1 HETATM 34 O O2D NAD . . . D 2 36.054 195.307 27.502 1 112.03 ? O2D NAD 602 A 1 HETATM 35 C C1D NAD . . . D 2 34.585 197.111 26.752 1 116.37 ? C1D NAD 602 A 1 HETATM 36 N N1N NAD . . . D 2 34.446 198.269 27.662 1 119.45 ? N1N NAD 602 A 1 HETATM 37 C C2N NAD . . . D 2 33.51 198.274 28.634 1 121.16 ? C2N NAD 602 A 1 HETATM 38 C C3N NAD . . . D 2 33.383 199.358 29.505 1 119.7 ? C3N NAD 602 A 1 HETATM 39 C C7N NAD . . . D 2 32.339 199.354 30.585 1 118.56 ? C7N NAD 602 A 1 HETATM 40 O O7N NAD . . . D 2 32.641 199.779 31.689 1 115.1 ? O7N NAD 602 A 1 HETATM 41 N N7N NAD . . . D 2 31.115 198.888 30.323 1 117.69 ? N7N NAD 602 A 1 HETATM 42 C C4N NAD . . . D 2 34.24 200.446 29.371 1 118.91 ? C4N NAD 602 A 1 HETATM 43 C C5N NAD . . . D 2 35.201 200.424 28.366 1 119.06 ? C5N NAD 602 A 1 HETATM 44 C C6N NAD . . . D 2 35.286 199.317 27.52 1 119.22 ? C6N NAD 602 A 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 44 #