data_7BSM # _model_server_result.job_id EcwBfI2RHpWhRuekJoOrjw _model_server_result.datetime_utc '2024-11-14 09:13:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7bsm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Y","auth_seq_id":201}' # _entry.id 7BSM # _exptl.entry_id 7BSM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 89.093 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ALANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7BSM _cell.length_a 170.359 _cell.length_b 170.359 _cell.length_c 192.499 _cell.Z_PDB 112 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7BSM _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? heptameric 7 author_defined_assembly 1 ? heptameric 7 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,O,P,Q 1 1 H,I,J,K,L,M,N,R,S,T,U,V,W,X,Y,Z 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id Y _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 MAN _pdbx_entity_branch_link.comp_id_2 MAN _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n O MAN 1 O 1 MAN DaD 201 MAN 2 n O MAN 2 O 2 MAN DaD 201 MAN 2 n P MAN 1 P 1 MAN FaF 201 MAN 2 n P MAN 2 P 2 MAN FaF 201 MAN 2 n Q MAN 1 Q 1 MAN GaG 201 MAN 2 n Q MAN 2 Q 2 MAN GaG 201 MAN 2 n R MAN 1 R 1 MAN JaJ 201 MAN 2 n R MAN 2 R 2 MAN JaJ 201 MAN 2 n S MAN 1 S 1 MAN KaK 201 MAN 2 n S MAN 2 S 2 MAN KaK 201 MAN 2 n T MAN 1 T 1 MAN LaL 201 MAN 2 n T MAN 2 T 2 MAN LaL 201 MAN 2 n U MAN 1 U 1 MAN MaM 201 MAN 2 n U MAN 2 U 2 MAN MaM 201 MAN 2 n V MAN 1 V 1 MAN NaN 201 MAN 2 n V MAN 2 V 2 MAN NaN 201 MAN # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 O O2 MAN . O MAN 1 1_555 O C1 MAN . O MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale2 P O2 MAN . P MAN 1 1_555 P C1 MAN . P MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.409 ? covale ? covale3 Q O2 MAN . Q MAN 1 1_555 Q C1 MAN . Q MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.414 ? covale ? covale4 R O2 MAN . R MAN 1 1_555 R C1 MAN . R MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.392 ? covale ? covale5 S O2 MAN . S MAN 1 1_555 S C1 MAN . S MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.393 ? covale ? covale6 T O2 MAN . T MAN 1 1_555 T C1 MAN . T MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale7 U O2 MAN . U MAN 1 1_555 U C1 MAN . U MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale8 V O2 MAN . V MAN 1 1_555 V C1 MAN . V MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? # _chem_comp.formula 'C3 H7 N O2' _chem_comp.formula_weight 89.093 _chem_comp.id ALA _chem_comp.mon_nstd_flag y _chem_comp.name ALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ALA sing 1 n n N H ALA sing 2 n n N H2 ALA sing 3 n n CA C ALA sing 4 n n CA CB ALA sing 5 n n CA HA ALA sing 6 n n C O ALA doub 7 n n C OXT ALA sing 8 n n CB HB1 ALA sing 9 n n CB HB2 ALA sing 10 n n CB HB3 ALA sing 11 n n OXT HXT ALA sing 12 n n # _atom_sites.entry_id 7BSM _atom_sites.fract_transf_matrix[1][1] 0.00587 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00587 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005195 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code W 3 MAN H 1 201 201 MAN MAN . X 3 MAN H 1 202 201 MAN MAN . Y 4 ALA I 1 201 145 ALA ALA . Z 3 MAN I 1 202 201 MAN MAN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ALA . . . Y 4 -0.539 15.89 -39.617 1 100.59 ? N ALA 201 I 1 HETATM 2 C CA ALA . . . Y 4 -0.986 17.039 -40.502 1 96.98 ? CA ALA 201 I 1 HETATM 3 C C ALA . . . Y 4 0.226 17.936 -40.805 1 95.16 ? C ALA 201 I 1 HETATM 4 O O ALA . . . Y 4 1.225 17.371 -41.249 1 82.25 ? O ALA 201 I 1 HETATM 5 C CB ALA . . . Y 4 -2.124 17.82 -39.87 1 73.44 ? CB ALA 201 I 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #